CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH11333	Soybean	cytosol	59.83	53.71
KRH02152	Soybean	cytosol	87.46	52.57
KRH20947	Soybean	cytosol, nucleus, peroxisome	71.23	41.19
VIT_05s0020g02400.t01	Wine grape	cytosol	65.53	37.64
PGSC0003DMT400079115	Potato	cytosol	62.68	36.24
Os11t0641200-01	Rice	cytosol	36.18	35.47
AT4G15475.1	Thale cress	cytosol	58.69	33.77
Solyc06g054440.2.1	Tomato	mitochondrion	50.43	33.08
CDY09760	Canola	cytosol	56.98	31.9
CDX90588	Canola	cytosol	56.98	31.8
Bra012785.1-P	Field mustard	cytosol	56.41	31.53
GSMUA_Achr3P22880_001	Banana	cytosol	56.7	31.09
Os10t0148800-01	Rice	cytosol	35.61	25.1
TraesCS4D01G148000.1	Wheat	cytosol	42.45	23.84
Zm00001d007640_P001	Maize	cytosol	42.45	23.73
EES08900	Sorghum	cytosol	42.73	23.62
TraesCS4A01G142500.3	Wheat	plastid	37.04	20.67
KRH47976	Soybean	cytosol	22.51	20.36
KRH64574	Soybean	cytosol	16.24	17.76
KRH15905	Soybean	cytosol	18.23	17.25
KRH18090	Soybean	cytosol	17.95	16.8
KRG90608	Soybean	cytosol	19.94	16.75
KRH72766	Soybean	cytosol	25.64	16.73
KRH36149	Soybean	cytosol	19.66	16.47
KRH53355	Soybean	cytosol	17.38	16.4
KRG96764	Soybean	cytosol	28.21	15.44
KRH68483	Soybean	cytosol	27.07	14.82
KRH05167	Soybean	cytosol	25.36	14.59
KRH17127	Soybean	cytosol	26.21	14.11
KRH16153	Soybean	cytosol	9.69	13.71
KRH15886	Soybean	cytosol	24.79	13.51
KRH52439	Soybean	cytosol, nucleus, peroxisome	24.22	13.32
KRH61771	Soybean	cytosol	23.93	13.21
KRH20255	Soybean	cytosol	23.65	12.99
KRH03688	Soybean	cytosol	23.65	12.99
KRH76059	Soybean	cytosol, nucleus, peroxisome	24.22	12.67
KRH62989	Soybean	cytosol	23.36	12.62
KRH65525	Soybean	cytosol, peroxisome, plastid	25.36	12.57
KRH04530	Soybean	cytosol	19.09	12.43
KRH15408	Soybean	plastid	19.37	12.39
KRH28425	Soybean	cytosol	18.52	12.36
KRH05631	Soybean	plastid	19.09	11.9
KRH77049	Soybean	cytosol	17.66	11.88
KRH57971	Soybean	cytosol	18.8	11.81
KRH52037	Soybean	cytosol	13.39	11.63
KRH38032	Soybean	cytosol	11.11	10.32
KRH61346	Soybean	cytosol	12.82	6.45
KRH04870	Soybean	cytosol	3.99	5.15

Protein Annotations

Gene3D:1.20.1280.50	Gene3D:3.80.10.10	MapMan:35.1	EMBL:ACUP02004720	InterPro:F-box_dom	EnsemblPlantsGene:GLYMA_07G254400
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001611	InterPro:IPR001810	InterPro:IPR032675
UniProt:K7L3T8	EnsemblPlants:KRH50979	ProteinID:KRH50979	ProteinID:KRH50979.1	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
InterPro:Leu-rich_rpt_Cys-con_subtyp	PFAM:PF12937	PFAM:PF13516	PANTHER:PTHR45517	SMART:SM00367	SUPFAM:SSF52047
UniParc:UPI000295A6EF	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:43126747..43128198

Molecular Weight (calculated)

38890.5 Da

IEP (calculated)

8.152

GRAVY (calculated)

0.055

Length

351 amino acids

Sequence
(BLAST)

001: MRGHDWINTC FPDDLIVEIF SRLHSMSTRD ACSLVCRRWF RLQRLTRTTL RIASTHLSSL HRLPTRFSNL RNLYIDQSLS IPLHLGKMLP NYEEGDLDFL
101: RLSDAGLSAL GQDFPKLHKL GLIRCSSVSS DGLTPLARKC TSLRALDLQV CYVGDQGLAA VGQCCKQLED LNLRFCHRLT DTGLVELALG VGKSLKSLGV
201: AACTKITDIS MEAVGSHCRS LENLSLESET IHNKGLLAVS QGCPALKVLK LHCFDVTDDA LKAVGTNCLL LELLALYSFQ RFTDKGLRAI GNGCKKLKNL
301: TLIDCYFISD KGLEAIATGC KELTHLEVNG CHNIRNLGLE YIGRSCQYVF L

Best Arabidopsis Sequence Match ( AT4G15475.1 )
(BLAST)

001: MRGHDRINNC LPEELILEIF RRLESKPNRD ACSLVCKRWL SLERFSRTTL RIGASFSPDD FISLLSRRFL YITSIHVDER ISVSLPSLSP SPKRKRGRDS
101: SSPSSSKRKK LTDKTHSGAE NVESSSLTDT GLTALANGFP RIENLSLIWC PNVSSVGLCS LAQKCTSLKS LDLQGCYVGD QGLAAVGKFC KQLEELNLRF
201: CEGLTDVGVI DLVVGCSKSL KSIGVAASAK ITDLSLEAVG SHCKLLEVLY LDSEYIHDKG LIAVAQGCHR LKNLKLQCVS VTDVAFAAVG ELCTSLERLA
301: LYSFQHFTDK GMRAIGKGSK KLKDLTLSDC YFVSCKGLEA IAHGCKELER VEINGCHNIG TRGIEAIGKS CPRLKELALL YCQRIGNSAL QEIGKGCKSL
401: EILHLVDCSG IGDIAMCSIA KGCRNLKKLH IRRCYEIGNK GIISIGKHCK SLTELSLRFC DKVGNKALIA IGKGCSLQQL NVSGCNQISD AGITAIARGC
501: PQLTHLDISV LQNIGDMPLA ELGEGCPMLK DLVLSHCHHI TDNGLNHLVQ KCKLLETCHM VYCPGITSAG VATVVSSCPH IKKVLIEKWK VTERTTRRAG
601: SVISYLCMDL

Arabidopsis Description

FBL4F-box/LRR-repeat protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5D2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.