Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 1
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G148000.1 | Wheat | cytosol | 93.32 | 93.92 |
| Zm00001d007640_P001 | Maize | cytosol | 69.79 | 69.9 |
| EES08900 | Sorghum | cytosol | 69.32 | 68.66 |
| Os11t0641200-01 | Rice | cytosol | 34.82 | 61.17 |
| GSMUA_Achr3P22880_001 | Banana | cytosol | 52.15 | 51.25 |
| VIT_05s0020g02400.t01 | Wine grape | cytosol | 46.58 | 47.95 |
| KRH02152 | Soybean | cytosol | 44.52 | 47.95 |
| KRH20947 | Soybean | cytosol, nucleus, peroxisome | 45.79 | 47.45 |
| PGSC0003DMT400079115 | Potato | cytosol | 44.67 | 46.29 |
| AT4G15475.1 | Thale cress | cytosol | 44.83 | 46.23 |
| Solyc06g054440.2.1 | Tomato | mitochondrion | 38.79 | 45.61 |
| CDX90588 | Canola | cytosol | 44.52 | 44.52 |
| Bra012785.1-P | Field mustard | cytosol | 44.36 | 44.43 |
| CDY09760 | Canola | cytosol | 44.2 | 44.34 |
| KRH11333 | Soybean | cytosol | 25.6 | 41.18 |
| KRH50979 | Soybean | cytosol | 20.67 | 37.04 |
| TraesCS6A01G234100.2 | Wheat | cytosol | 17.65 | 26.62 |
| TraesCS3A01G067800.1 | Wheat | cytosol | 14.79 | 26.5 |
| TraesCS5A01G091800.2 | Wheat | cytosol | 27.03 | 25.72 |
| TraesCS5A01G150800.2 | Wheat | mitochondrion | 25.91 | 23.9 |
| TraesCS3A01G407700.1 | Wheat | cytosol | 14.31 | 23.68 |
| TraesCS1A01G264900.1 | Wheat | cytosol | 13.83 | 23.51 |
| TraesCS7A01G377500.1 | Wheat | cytosol | 22.42 | 21.73 |
| TraesCS6A01G181900.1 | Wheat | cytosol | 21.62 | 20.96 |
| TraesCS4A01G230600.2 | Wheat | plastid | 13.35 | 20.74 |
| TraesCS2A01G359900.1 | Wheat | cytosol | 16.69 | 19.41 |
| TraesCS5A01G161400.1 | Wheat | cytosol, plastid | 15.9 | 18.98 |
Protein Annotations
| Gene3D:1.20.1280.50 | Gene3D:3.80.10.10 | MapMan:35.1 | InterPro:F-box-like_dom_sf | InterPro:F-box_dom | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR001611 | InterPro:IPR001810 | InterPro:IPR032675 | InterPro:LRR_dom_sf |
| InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_Cys-con_subtyp | PFAM:PF12937 | PFAM:PF13516 | PANTHER:PTHR45517 | SMART:SM00367 |
| SUPFAM:SSF52047 | SUPFAM:SSF81383 | EnsemblPlantsGene:TraesCS4A01G142500 | EnsemblPlants:TraesCS4A01G142500.3 | SEG:seg | : |
Description
No Description!
Coordinates
chr4A:-:229496867..229512171
Molecular Weight (calculated)
67662.9 Da
IEP (calculated)
7.889
GRAVY (calculated)
0.206
Length
629 amino acids
Sequence
(BLAST)
(BLAST)
001: MLPLPRHLFP STTSNFFKFP NSLRPLLSPA TPAAMKGADL INVALPEELL EDVLRRVGGE KLDLDACALV CRRWRRLDRA TRRSAKLPAS GVHADEVVGL
101: FVERFPALAD VSIDERLSAD AAVVSAPASR SRRHVISSIP SGSRSRMSRV PRFAGILFPL PSEQTPSADG IESFCLTDVG LTSLARGCKG LEKLSLVWCS
201: AISSSGLVRV AENCKKLASL DIQACYIGDP GLVAIGEGCN LLNNLSLRFV EGATDEGLIG LIKSCGQSLL SLELVKNEGV ISIAKGCHFL KNLKLQCIGA
301: GDEALEAIGS CCSLLEILSL NNFERFTDRS LSSIAKGCKN LTDLVLNDCL LLTDRSLEFV ARSCKKIARL KINGCQNMET AALEHIGRWC PGLLELSLIY
401: CPRVRDTAFL ELGKGCTLLQ SLYLVDCSRI GDDAMCHIAQ GCKYLKEISI RRGYEVGDKA LISIAENCKL LKELTLQFCE RVSDTGLAAI AEGCSLQKLN
501: LCGCQLITDN GLAAIARGCG DLVFLDISVL PMTGDMGLAE IGQGCPQIKD IALSHCPGVT DVGLGHLVRG CLQLQSCQLV YCKRVTSTGV ATVVSSCSRL
601: KKLLVEEAKV SERTRRRAGP ILSFLCSGL
101: FVERFPALAD VSIDERLSAD AAVVSAPASR SRRHVISSIP SGSRSRMSRV PRFAGILFPL PSEQTPSADG IESFCLTDVG LTSLARGCKG LEKLSLVWCS
201: AISSSGLVRV AENCKKLASL DIQACYIGDP GLVAIGEGCN LLNNLSLRFV EGATDEGLIG LIKSCGQSLL SLELVKNEGV ISIAKGCHFL KNLKLQCIGA
301: GDEALEAIGS CCSLLEILSL NNFERFTDRS LSSIAKGCKN LTDLVLNDCL LLTDRSLEFV ARSCKKIARL KINGCQNMET AALEHIGRWC PGLLELSLIY
401: CPRVRDTAFL ELGKGCTLLQ SLYLVDCSRI GDDAMCHIAQ GCKYLKEISI RRGYEVGDKA LISIAENCKL LKELTLQFCE RVSDTGLAAI AEGCSLQKLN
501: LCGCQLITDN GLAAIARGCG DLVFLDISVL PMTGDMGLAE IGQGCPQIKD IALSHCPGVT DVGLGHLVRG CLQLQSCQLV YCKRVTSTGV ATVVSSCSRL
601: KKLLVEEAKV SERTRRRAGP ILSFLCSGL
001: MRGHDRINNC LPEELILEIF RRLESKPNRD ACSLVCKRWL SLERFSRTTL RIGASFSPDD FISLLSRRFL YITSIHVDER ISVSLPSLSP SPKRKRGRDS
101: SSPSSSKRKK LTDKTHSGAE NVESSSLTDT GLTALANGFP RIENLSLIWC PNVSSVGLCS LAQKCTSLKS LDLQGCYVGD QGLAAVGKFC KQLEELNLRF
201: CEGLTDVGVI DLVVGCSKSL KSIGVAASAK ITDLSLEAVG SHCKLLEVLY LDSEYIHDKG LIAVAQGCHR LKNLKLQCVS VTDVAFAAVG ELCTSLERLA
301: LYSFQHFTDK GMRAIGKGSK KLKDLTLSDC YFVSCKGLEA IAHGCKELER VEINGCHNIG TRGIEAIGKS CPRLKELALL YCQRIGNSAL QEIGKGCKSL
401: EILHLVDCSG IGDIAMCSIA KGCRNLKKLH IRRCYEIGNK GIISIGKHCK SLTELSLRFC DKVGNKALIA IGKGCSLQQL NVSGCNQISD AGITAIARGC
501: PQLTHLDISV LQNIGDMPLA ELGEGCPMLK DLVLSHCHHI TDNGLNHLVQ KCKLLETCHM VYCPGITSAG VATVVSSCPH IKKVLIEKWK VTERTTRRAG
601: SVISYLCMDL
101: SSPSSSKRKK LTDKTHSGAE NVESSSLTDT GLTALANGFP RIENLSLIWC PNVSSVGLCS LAQKCTSLKS LDLQGCYVGD QGLAAVGKFC KQLEELNLRF
201: CEGLTDVGVI DLVVGCSKSL KSIGVAASAK ITDLSLEAVG SHCKLLEVLY LDSEYIHDKG LIAVAQGCHR LKNLKLQCVS VTDVAFAAVG ELCTSLERLA
301: LYSFQHFTDK GMRAIGKGSK KLKDLTLSDC YFVSCKGLEA IAHGCKELER VEINGCHNIG TRGIEAIGKS CPRLKELALL YCQRIGNSAL QEIGKGCKSL
401: EILHLVDCSG IGDIAMCSIA KGCRNLKKLH IRRCYEIGNK GIISIGKHCK SLTELSLRFC DKVGNKALIA IGKGCSLQQL NVSGCNQISD AGITAIARGC
501: PQLTHLDISV LQNIGDMPLA ELGEGCPMLK DLVLSHCHHI TDNGLNHLVQ KCKLLETCHM VYCPGITSAG VATVVSSCPH IKKVLIEKWK VTERTTRRAG
601: SVISYLCMDL
Arabidopsis Description
FBL4F-box/LRR-repeat protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5D2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.