CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH50979	Soybean	cytosol	52.57	87.46
KRH20947	Soybean	cytosol, nucleus, peroxisome	81.34	78.25
KRH11333	Soybean	cytosol	49.14	73.4
VIT_05s0020g02400.t01	Wine grape	cytosol	76.37	73.0
Solyc06g054440.2.1	Tomato	mitochondrion	64.9	70.84
PGSC0003DMT400079115	Potato	cytosol	73.46	70.68
AT4G15475.1	Thale cress	cytosol	69.52	66.56
CDY09760	Canola	cytosol	66.27	61.72
Bra012785.1-P	Field mustard	cytosol	65.92	61.31
CDX90588	Canola	cytosol	65.92	61.21
GSMUA_Achr3P22880_001	Banana	cytosol	64.55	58.91
TraesCS4D01G148000.1	Wheat	cytosol	51.37	48.0
Zm00001d007640_P001	Maize	cytosol	50.86	47.29
EES08900	Sorghum	cytosol	50.34	46.3
TraesCS4A01G142500.3	Wheat	plastid	47.95	44.52
Os11t0641200-01	Rice	cytosol	24.32	39.66
Os10t0148800-01	Rice	cytosol	28.42	33.33
KRG90608	Soybean	cytosol	20.21	28.23
KRH36149	Soybean	cytosol	20.03	27.92
KRG96764	Soybean	cytosol	28.6	26.05
KRH68483	Soybean	cytosol	28.42	25.9
KRH17127	Soybean	cytosol	28.6	25.61
KRH47976	Soybean	cytosol	16.95	25.52
KRH72766	Soybean	cytosol	23.29	25.28
KRH64574	Soybean	cytosol	13.7	24.92
KRH16153	Soybean	cytosol	10.45	24.6
KRH15905	Soybean	cytosol	15.58	24.53
KRH18090	Soybean	cytosol	15.41	24.0
KRH76059	Soybean	cytosol, nucleus, peroxisome	27.23	23.7
KRH65525	Soybean	cytosol, peroxisome, plastid	28.08	23.16
KRH04530	Soybean	cytosol	21.23	23.01
KRH53355	Soybean	cytosol	14.55	22.85
KRH15408	Soybean	plastid	21.4	22.77
KRH38032	Soybean	cytosol	14.73	22.75
KRH57971	Soybean	cytosol	21.58	22.54
KRH15886	Soybean	cytosol	24.66	22.36
KRH20255	Soybean	cytosol	24.14	22.07
KRH28425	Soybean	cytosol	19.69	21.86
KRH77049	Soybean	cytosol	19.52	21.84
KRH03688	Soybean	cytosol	23.8	21.75
KRH05631	Soybean	plastid	20.89	21.67
KRH05167	Soybean	cytosol	22.6	21.64
KRH52037	Soybean	cytosol	14.9	21.53
KRH52439	Soybean	cytosol, nucleus, peroxisome	22.95	21.0
KRH62989	Soybean	cytosol	23.12	20.77
KRH61771	Soybean	cytosol	22.6	20.75
KRH04870	Soybean	cytosol	9.08	19.49
KRH61346	Soybean	cytosol	13.18	11.03

Protein Annotations

Gene3D:1.20.1280.50	EntrezGene:100812999	Gene3D:3.80.10.10	MapMan:35.1	EMBL:ACUP02010296	InterPro:F-box-like_dom_sf
InterPro:F-box_dom	EnsemblPlantsGene:GLYMA_17G019800	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	UniProt:I1MRB1
InterPro:IPR001611	InterPro:IPR001810	InterPro:IPR032675	EnsemblPlants:KRH02152	ProteinID:KRH02152	ProteinID:KRH02152.1
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_Cys-con_subtyp	PFAM:PF12937	PFAM:PF13516	PANTHER:PTHR45517
SMART:SM00367	SUPFAM:SSF52047	SUPFAM:SSF81383	UniParc:UPI000233F203	SEG:seg	:

Description

hypothetical protein

Coordinates

chr17:+:1475182..1480986

Molecular Weight (calculated)

63530.8 Da

IEP (calculated)

7.968

GRAVY (calculated)

0.137

Length

584 amino acids

Sequence
(BLAST)

001: MRGHDWINSC FPDELIVEIF SRLHSKSTRD ACSLVCRRWF RLERRTRTTL RIGATHLFLH RLPSRFSNIR NLYIDERLSI PLHLGKRRPN DEEGDLDSLC
101: LSDAGLSALG EGFPKLHKLG LIWCSNVSSD GLTSLARKCT SLKALDLQGC YVGDQGLAAV GQCCKQLEDL NLRFCEGLTD TGLVELALGV GKSLKSLGVA
201: ACAKITDISM EAVGSHCRSL ETLSLDSECI HNKGLLAVAQ GCPTLKVLKL QCINVTDDAL QAVGANCLSL ELLALYSFQR FTDKGLRGIG NGCKKLKNLT
301: LIDCYFISDK GLEAIANGCK ELTHLEVNGC HNIGTLGLEY IGRSCQYLTE LALLYCHRIG DVSLLEVGKG CKFLQVLHLV DCSSIGDDAM CSIANGCRNL
401: KKLHIRRCYK IGNKGLIAVG KHCKSLTDLS IRFCDRVGDG ALTAIAEGCS LHYLNVSGCH QIGDAGVIAI ARGCPQLCYL DVSVLQNLGD MAMAELGEHC
501: TLLKEIVLSH CRQITDVGLT HLVKSCTLLE SCQMVYCSGI TSAGVATVVS SCPNMKKVLV EKWKVSQRTK RRAGSVIACL CVDL

Best Arabidopsis Sequence Match ( AT4G15475.1 )
(BLAST)

001: MRGHDRINNC LPEELILEIF RRLESKPNRD ACSLVCKRWL SLERFSRTTL RIGASFSPDD FISLLSRRFL YITSIHVDER ISVSLPSLSP SPKRKRGRDS
101: SSPSSSKRKK LTDKTHSGAE NVESSSLTDT GLTALANGFP RIENLSLIWC PNVSSVGLCS LAQKCTSLKS LDLQGCYVGD QGLAAVGKFC KQLEELNLRF
201: CEGLTDVGVI DLVVGCSKSL KSIGVAASAK ITDLSLEAVG SHCKLLEVLY LDSEYIHDKG LIAVAQGCHR LKNLKLQCVS VTDVAFAAVG ELCTSLERLA
301: LYSFQHFTDK GMRAIGKGSK KLKDLTLSDC YFVSCKGLEA IAHGCKELER VEINGCHNIG TRGIEAIGKS CPRLKELALL YCQRIGNSAL QEIGKGCKSL
401: EILHLVDCSG IGDIAMCSIA KGCRNLKKLH IRRCYEIGNK GIISIGKHCK SLTELSLRFC DKVGNKALIA IGKGCSLQQL NVSGCNQISD AGITAIARGC
501: PQLTHLDISV LQNIGDMPLA ELGEGCPMLK DLVLSHCHHI TDNGLNHLVQ KCKLLETCHM VYCPGITSAG VATVVSSCPH IKKVLIEKWK VTERTTRRAG
601: SVISYLCMDL

Arabidopsis Description

FBL4F-box/LRR-repeat protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5D2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.