Factsheet for Zm00001d007640_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES08900	Sorghum	cytosol	89.49	88.5
TraesCS4D01G148000.1	Wheat	cytosol	74.2	74.56
Os11t0641200-01	Rice	cytosol	40.92	71.79
TraesCS4A01G142500.3	Wheat	plastid	69.9	69.79
GSMUA_Achr3P22880_001	Banana	cytosol	54.46	53.44
VIT_05s0020g02400.t01	Wine grape	cytosol	50.0	51.39
PGSC0003DMT400079115	Potato	cytosol	49.36	51.07
KRH02152	Soybean	cytosol	47.29	50.86
KRH20947	Soybean	cytosol, nucleus, peroxisome	48.41	50.08
Solyc06g054440.2.1	Tomato	mitochondrion	42.52	49.91
AT4G15475.1	Thale cress	cytosol	48.09	49.51
CDX90588	Canola	cytosol	49.04	48.97
CDY09760	Canola	cytosol	48.89	48.96
Bra012785.1-P	Field mustard	cytosol	48.89	48.89
KRH11333	Soybean	cytosol	28.34	45.52
KRH50979	Soybean	cytosol	23.73	42.45
Zm00001d048695_P001	Maize	cytosol	28.34	27.47
Zm00001d041635_P002	Maize	cytosol	28.98	27.45
Zm00001d023825_P001	Maize	cytosol	28.66	27.27
Zm00001d015974_P002	Maize	cytosol	14.97	26.26
Zm00001d051219_P001	Maize	cytosol	17.04	25.66
Zm00001d044622_P002	Maize	mitochondrion	27.55	24.57
Zm00001d005072_P003	Maize	mitochondrion	27.87	24.14
Zm00001d038224_P004	Maize	cytosol	14.01	23.91
Zm00001d053642_P001	Maize	cytosol	23.57	22.73
Zm00001d015778_P001	Maize	cytosol	22.93	22.39
Zm00001d003103_P001	Maize	plastid	17.68	21.35
Zm00001d019677_P001	Maize	cytosol	17.52	20.95
Zm00001d007294_P001	Maize	cytosol	13.54	20.94
Zm00001d000408_P001	Maize	cytosol	24.36	20.59
Zm00001d000224_P001	Maize	cytosol	14.17	20.55
Zm00001d036880_P003	Maize	cytosol	24.04	20.52
Zm00001d025808_P001	Maize	plastid	17.36	19.96
Zm00001d025812_P001	Maize	plastid	17.36	19.96
Zm00001d028552_P001	Maize	cytosol, extracellular, mitochondrion, plastid	7.01	19.82
Zm00001d037295_P001	Maize	mitochondrion	7.32	18.85
Zm00001d039723_P001	Maize	cytosol, extracellular, plastid	6.53	17.6

Protein Annotations

EntrezGene:100382166	Gene3D:3.80.10.10	MapMan:35.1	UniProt:A0A096PQ52	InterPro:F-box-like_dom_sf	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
InterPro:Leu-rich_rpt_Cys-con_subtyp	ProteinID:ONM27265.1	PFAM:PF13516	PANTHER:PTHR45517	SMART:SM00367	SUPFAM:SSF52047
SUPFAM:SSF81383	UniParc:UPI000220C723	EnsemblPlantsGene:Zm00001d007640	EnsemblPlants:Zm00001d007640_P001	EnsemblPlants:Zm00001d007640_T001	SEG:seg

Description

F-box/LRR-repeat protein 4

Coordinates

chr2:-:236782564..236786989

Molecular Weight (calculated)

68363.4 Da

IEP (calculated)

8.070

GRAVY (calculated)

0.104

Length

628 amino acids

Sequence
(BLAST)

001: MRGADLINPA LPDELLDDVI RRVGSGGAKR DLDACALVCR RWRRLERASR RSARLAASGE RADEVVRLVA ERFTALTEVS VDERLTAAAA ASGSAPRSYR
101: SGTLHIPNRI RRRRRLPLAS NLTLHIAPFP LDQPVSDERT ERSCLTDVGL THLARGCRGL EKLSLVWCSA ISSTGLVRIA ENCKNLTSLD LQACFIGDPG
201: LVAIGEGCKL LRKLNLRFVE GTTDEGLIGL VKNCGQSLVS LSVATCLWLT DASLHAVGSH CPNLEILSVE SDRVQSVGII SIAKGCRQLK TLKLQCIGTG
301: DDALDAIGSF CPLLEILSLN NFERFTDRSL TSIAKGCKNL TDLVLTDCQL LTDRSLEFVA RNCKKLARLK INGCQSMESV ALEHIGRWCP RLLELSLIFC
401: PRIENSAFLE IGSGCSLLRT LHLIDCSRIT DDALCHIAQG CKNLTELSIR RGYEVGDRAL VSIAENCKSL RELTLQFCER VSDAGLSAIA ENCPLHRLNL
501: CGCHLITDTG LTAVARGCPD LVFLDMSVLR IVGDIALAEI GDGCPKLREI ALSHCPEVTN VGLGHLVRGC LQLESCQMVY CRRITSSGVA TVVSGCGRLK
601: KVLVEEWKVS ERTRRRAGPV LSFLCTGL

Best Arabidopsis Sequence Match ( AT4G15475.1 )
(BLAST)

001: MRGHDRINNC LPEELILEIF RRLESKPNRD ACSLVCKRWL SLERFSRTTL RIGASFSPDD FISLLSRRFL YITSIHVDER ISVSLPSLSP SPKRKRGRDS
101: SSPSSSKRKK LTDKTHSGAE NVESSSLTDT GLTALANGFP RIENLSLIWC PNVSSVGLCS LAQKCTSLKS LDLQGCYVGD QGLAAVGKFC KQLEELNLRF
201: CEGLTDVGVI DLVVGCSKSL KSIGVAASAK ITDLSLEAVG SHCKLLEVLY LDSEYIHDKG LIAVAQGCHR LKNLKLQCVS VTDVAFAAVG ELCTSLERLA
301: LYSFQHFTDK GMRAIGKGSK KLKDLTLSDC YFVSCKGLEA IAHGCKELER VEINGCHNIG TRGIEAIGKS CPRLKELALL YCQRIGNSAL QEIGKGCKSL
401: EILHLVDCSG IGDIAMCSIA KGCRNLKKLH IRRCYEIGNK GIISIGKHCK SLTELSLRFC DKVGNKALIA IGKGCSLQQL NVSGCNQISD AGITAIARGC
501: PQLTHLDISV LQNIGDMPLA ELGEGCPMLK DLVLSHCHHI TDNGLNHLVQ KCKLLETCHM VYCPGITSAG VATVVSSCPH IKKVLIEKWK VTERTTRRAG
601: SVISYLCMDL

Arabidopsis Description

FBL4F-box/LRR-repeat protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5D2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.