Factsheet for Zm00001d037295_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
plastid 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, vacuole
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d039723_P001	Maize	cytosol, extracellular, plastid	79.92	83.69
Zm00001d028552_P001	Maize	cytosol, extracellular, mitochondrion, plastid	73.36	80.63
Zm00001d036880_P003	Maize	cytosol	66.39	22.01
Zm00001d000408_P001	Maize	cytosol	64.75	21.27
Zm00001d015778_P001	Maize	cytosol	50.82	19.28
Zm00001d053642_P001	Maize	cytosol	50.41	18.89
PGSC0003DMT400008648	Potato	cytosol	9.02	13.17
Zm00001d015974_P002	Maize	cytosol	16.39	11.17
GSMUA_Achr8P15580_001	Banana	cytosol	15.98	9.56
GSMUA_Achr9P11380_001	Banana	cytosol	16.8	9.15
KRH52037	Soybean	cytosol	14.34	8.66
Zm00001d051219_P001	Maize	cytosol	14.75	8.63
Zm00001d038224_P004	Maize	cytosol	11.48	7.61
Zm00001d003103_P001	Maize	plastid	15.98	7.5
Zm00001d025808_P001	Maize	plastid	16.39	7.33
Zm00001d025812_P001	Maize	plastid	16.39	7.33
Zm00001d007640_P001	Maize	cytosol	18.85	7.32
KRH04530	Soybean	cytosol	15.98	7.24
KRH57971	Soybean	cytosol	15.98	6.98
Zm00001d044622_P002	Maize	mitochondrion	19.67	6.82
CDY25663	Canola	plastid	14.34	6.81
CDY43846	Canola	plastid	14.34	6.81
Bra032213.1-P	Field mustard	plastid	14.34	6.81
AT1G47056.1	Thale cress	cytosol, plastid	14.34	6.76
Zm00001d019677_P001	Maize	cytosol	14.34	6.67
Solyc04g078490.1.1	Tomato	cytosol	14.34	6.55
Zm00001d023825_P001	Maize	cytosol	17.62	6.52
Zm00001d041635_P002	Maize	cytosol	17.62	6.49
Zm00001d048695_P001	Maize	cytosol	17.21	6.48
VIT_18s0001g09940.t01	Wine grape	plastid	14.34	6.47
Zm00001d000224_P001	Maize	cytosol	11.48	6.47
CDX68575	Canola	cytosol	13.52	6.46
AT5G67250.1	Thale cress	cytosol	13.93	6.45
Zm00001d005072_P003	Maize	mitochondrion	18.85	6.34
CDX81326	Canola	cytosol	13.52	6.3
CDY18646	Canola	cytosol	13.52	6.3
Bra037120.1-P	Field mustard	cytosol	13.52	6.27
CDX83114	Canola	cytosol	12.7	6.24
Bra029994.1-P	Field mustard	cytosol	12.7	6.07
KRH15408	Soybean	plastid	13.52	6.01
PGSC0003DMT400064250	Potato	mitochondrion	13.52	6.0
KRH28425	Soybean	cytosol	12.7	5.89
Solyc03g044220.1.1	Tomato	cytosol	13.11	5.83
PGSC0003DMT400053918	Potato	cytosol	13.11	5.83
KRH77049	Soybean	cytosol	12.3	5.75
AT3G50080.1	Thale cress	cytosol	12.3	5.75
Zm00001d007294_P001	Maize	cytosol	9.43	5.67
Solyc02g092990.1.1	Tomato	plastid	12.7	5.64
KRH05631	Soybean	plastid	12.7	5.51
VIT_07s0129g01110.t01	Wine grape	plastid	12.3	5.33
AT4G07400.1	Thale cress	nucleus	11.89	5.23
PGSC0003DMT400091765	Potato	cytosol	14.75	5.1
KRH61346	Soybean	cytosol	13.93	4.87
CDY12824	Canola	nucleus	14.75	3.3
CDY01426	Canola	cytosol	14.34	3.23

Protein Annotations

EnsemblPlants:Zm00001d037295_P001	EnsemblPlants:Zm00001d037295_T001	EnsemblPlantsGene:Zm00001d037295	Gene3D:3.80.10.10	InterPro:IPR032675	InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt_Cys-con_subtyp	PANTHER:PTHR44327	PANTHER:PTHR44327:SF3	ProteinID:AQK83506.1	SEG:seg	SMART:SM00367
SUPFAM:SSF52047	UniParc:UPI00084325AB	UniProt:A0A1D6LW86	MapMan:35.1	:	:

Description

EIN3-binding F-box protein 1

Coordinates

chr6:-:119714504..119715351

Molecular Weight (calculated)

25951.7 Da

IEP (calculated)

9.111

GRAVY (calculated)

0.261

Length

244 amino acids

Sequence
(BLAST)

001: MGYYGKSIKD LALARIPAKL RHMTIVSFPG LMDLALASVA KFSPSLRLVN LKKCSKECSK VTLTGILAFF LNCSPKFKSL SLSQCIEIKD ICSTPAQLPV
101: CKSLRSLAIK DCSGFADTSL PMVGMFCPQL ENINLSGLSA VIDNGFLPLM KSSDSGLVDI DLNSCENLTD TAVSALVKAH DASLATSVSR DAARPLMQAY
201: SPSVRAAASS SSLAFRTAWS VTTTSRSWKR RSSSGCVSSC CVAV

Best Arabidopsis Sequence Match ( AT2G25490.1 )
(BLAST)

001: MSQIFSFAGE NDFYRRGAIY PNPKDASLLL SLGSFADVYF PPSKRSRVVA PTIFSAFEKK PVSIDVLPDE CLFEIFRRLS GPQERSACAF VSKQWLTLVS
101: SIRQKEIDVP SKITEDGDDC EGCLSRSLDG KKATDVRLAA IAVGTAGRGG LGKLSIRGSN SAKVSDLGLR SIGRSCPSLG SLSLWNVSTI TDNGLLEIAE
201: GCAQLEKLEL NRCSTITDKG LVAIAKSCPN LTELTLEACS RIGDEGLLAI ARSCSKLKSV SIKNCPLVRD QGIASLLSNT TCSLAKLKLQ MLNVTDVSLA
301: VVGHYGLSIT DLVLAGLSHV SEKGFWVMGN GVGLQKLNSL TITACQGVTD MGLESVGKGC PNMKKAIISK SPLLSDNGLV SFAKASLSLE SLQLEECHRV
401: TQFGFFGSLL NCGEKLKAFS LVNCLSIRDL TTGLPASSHC SALRSLSIRN CPGFGDANLA AIGKLCPQLE DIDLCGLKGI TESGFLHLIQ SSLVKINFSG
501: CSNLTDRVIS AITARNGWTL EVLNIDGCSN ITDASLVSIA ANCQILSDLD ISKCAISDSG IQALASSDKL KLQILSVAGC SMVTDKSLPA IVGLGSTLLG
601: LNLQQCRSIS NSTVDFLVER LYKCDILS

Arabidopsis Description

EBF1EIN3-binding F-box protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKK0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.