Factsheet for Zm00001d048695_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG29052	Sorghum	plastid	91.2	89.55
Zm00001d023825_P001	Maize	cytosol	72.53	71.21
Zm00001d041635_P002	Maize	cytosol	72.22	70.59
GSMUA_Achr11P...	Banana	cytosol	59.72	58.99
GSMUA_Achr6P20450_001	Banana	cytosol	59.1	58.03
KRH68483	Soybean	cytosol	49.69	50.23
VIT_14s0060g01970.t01	Wine grape	cytosol, plastid	49.23	49.61
KRG96764	Soybean	cytosol	49.07	49.61
CDX88253	Canola	cytosol	47.22	47.81
CDY19741	Canola	cytosol	45.52	47.81
Bra009931.1-P	Field mustard	cytosol	47.07	47.66
CDX80608	Canola	cytosol	46.91	47.5
CDY53337	Canola	cytosol	46.76	47.42
Bra036607.1-P	Field mustard	cytosol	46.3	46.95
AT5G27920.1	Thale cress	cytosol, extracellular, peroxisome	46.3	46.73
PGSC0003DMT400063732	Potato	cytosol	45.83	46.33
Solyc01g099970.2.1	Tomato	extracellular	43.83	45.88
Zm00001d044622_P002	Maize	mitochondrion	39.81	36.65
Zm00001d005072_P003	Maize	mitochondrion	38.58	34.48
Zm00001d051219_P001	Maize	cytosol	18.98	29.5
Zm00001d007640_P001	Maize	cytosol	27.47	28.34
Zm00001d015974_P002	Maize	cytosol	13.43	24.3
Zm00001d038224_P004	Maize	cytosol	13.12	23.1
Zm00001d053642_P001	Maize	cytosol	21.91	21.81
Zm00001d015778_P001	Maize	cytosol	21.6	21.77
Zm00001d007294_P001	Maize	cytosol	13.58	21.67
Zm00001d019677_P001	Maize	cytosol	16.98	20.95
Zm00001d000224_P001	Maize	cytosol	13.89	20.79
Zm00001d028552_P001	Maize	cytosol, extracellular, mitochondrion, plastid	6.94	20.27
Zm00001d036880_P003	Maize	cytosol	21.45	18.89
Zm00001d000408_P001	Maize	cytosol	21.6	18.84
Zm00001d003103_P001	Maize	plastid	14.2	17.69
Zm00001d037295_P001	Maize	mitochondrion	6.48	17.21
Zm00001d039723_P001	Maize	cytosol, extracellular, plastid	6.17	17.17
Zm00001d025808_P001	Maize	plastid	14.04	16.67
Zm00001d025812_P001	Maize	plastid	13.89	16.48

Protein Annotations

EntrezGene:100304332	Gene3D:3.80.10.10	MapMan:35.1	ProteinID:AQK48487.1	EMBL:BT060870	UniProt:C0HEW4
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_Cys-con_subtyp	PFAM:PF13516	PANTHER:PTHR44309	PANTHER:PTHR44309:SF2	SMART:SM00367
SUPFAM:SSF52047	UniParc:UPI0001948860	EnsemblPlantsGene:Zm00001d048695	EnsemblPlants:Zm00001d048695_P001	EnsemblPlants:Zm00001d048695_T001	SEG:seg

Description

F-box family protein

Coordinates

chr4:+:3429846..3433327

Molecular Weight (calculated)

69379.1 Da

IEP (calculated)

7.201

GRAVY (calculated)

0.304

Length

648 amino acids

Sequence
(BLAST)

001: MSHDTGAGVE SLSLDLLAHA LAAVRDPRDR KSCRLASRAF ARAEAASRRA ARVLRRDALP RALRAFPALS SLDLSACAGL DDASLAAALP EEPLPVRRVR
101: LARASGVGWR GLDALVAACP SLEAVDLSHC VAAGDREMAA LAAAAGLRDL VMDKCLGVTD VGLAKVAVGC PGLQSLSLKW CREISDIGVD LLAKKCPQLR
201: SLDISYLKVT NESLRSLSTL EKLEDIAMVS CLFVDDDGLQ MLSMCSSLQS IDVARCHHVS SLGLASLMDG QRSLRKINVA HSLHEIEACV LSKLSTIGET
301: LTVLRLDGLE IFASNLQAIG STCKNLVEIG LSKCNGVTDD GIVSLVARCR DLRTIDVTCC HLLTNAALAA IAENCRKIEC LRLESCPFVS EKGLESIATL
401: CSDLKEIDLT DCRINDAALQ QLASCSELLI LKLGLCSSIS DEGLVYISAN CGKLVELDLY RCSAVTDDGL AAVASGCKKM RMLNLCYCTQ ITDGGLKHVG
501: GLEELANLEL RCLVRVTGVG ITSIAVGCSS LVELDLKRCY SVDDAGLWAL SRYSQNLRQL TVSYCQVTGL GLCHLLGSLR CLQDVKMVHL SWVSIEGFEM
601: ALRAACGRLK KLKLLGGLRS VLSTELLLTL QACGCRVRWV DKPLVYKG

Best Arabidopsis Sequence Match ( AT5G01720.1 )
(BLAST)

001: MKKVKQIRVL KPFDLLSEEL VFIILDLISP NPSDLKSFSL TCKSFYQLES KHRGSLKPLR SDYLPRILTR YRNTTDLDLT FCPRVTDYAL SVVGCLSGPT
101: LRSLDLSRSG SFSAAGLLRL ALKCVNLVEI DLSNATEMRD ADAAVVAEAR SLERLKLGRC KMLTDMGIGC IAVGCKKLNT VSLKWCVGVG DLGVGLLAVK
201: CKDIRTLDLS YLPITGKCLH DILKLQHLEE LLLEGCFGVD DDSLKSLRHD CKSLKKLDAS SCQNLTHRGL TSLLSGAGYL QRLDLSHCSS VISLDFASSL
301: KKVSALQSIR LDGCSVTPDG LKAIGTLCNS LKEVSLSKCV SVTDEGLSSL VMKLKDLRKL DITCCRKLSR VSITQIANSC PLLVSLKMES CSLVSREAFW
401: LIGQKCRLLE ELDLTDNEID DEGLKSISSC LSLSSLKLGI CLNITDKGLS YIGMGCSNLR ELDLYRSVGI TDVGISTIAQ GCIHLETINI SYCQDITDKS
501: LVSLSKCSLL QTFESRGCPN ITSQGLAAIA VRCKRLAKVD LKKCPSINDA GLLALAHFSQ NLKQINVSDT AVTEVGLLSL ANIGCLQNIA VVNSSGLRPS
601: GVAAALLGCG GLRKAKLHAS LRSLLPLSLI HHLEARGCAF LWKDNTLQAE LDPKYWKQQL EEMAP

Arabidopsis Description

FBL3F-box/LRR-repeat protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWU5]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.