CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH68483	Soybean	cytosol	96.57	96.57
VIT_14s0060g01970.t01	Wine grape	cytosol, plastid	66.77	66.56
PGSC0003DMT400063732	Potato	cytosol	58.66	58.66
Solyc01g099970.2.1	Tomato	extracellular	56.63	58.64
CDX88253	Canola	cytosol	58.03	58.12
CDY19741	Canola	cytosol	55.85	58.02
Bra009931.1-P	Field mustard	cytosol	57.88	57.97
Bra036607.1-P	Field mustard	cytosol	57.72	57.9
CDY53337	Canola	cytosol	57.57	57.75
CDX80608	Canola	cytosol	57.57	57.66
AT5G27920.1	Thale cress	cytosol, extracellular, peroxisome	57.72	57.63
GSMUA_Achr6P20450_001	Banana	cytosol	53.35	51.82
Zm00001d023825_P001	Maize	cytosol	53.04	51.52
Zm00001d041635_P002	Maize	cytosol	52.89	51.13
KXG23663	Sorghum	cytosol	52.73	51.06
GSMUA_Achr11P...	Banana	cytosol	51.79	50.61
TraesCS5A01G091800.2	Wheat	cytosol	52.11	50.53
TraesCS5B01G097800.2	Wheat	cytosol	51.95	50.38
Os12t0552700-01	Rice	cytosol, peroxisome	29.17	50.13
TraesCS5D01G103900.3	Wheat	cytosol	51.95	50.0
KXG29052	Sorghum	plastid	50.55	49.09
Zm00001d048695_P001	Maize	cytosol	49.61	49.07
HORVU5Hr1G024060.1	Barley	cytosol, plastid	52.11	39.62
KRH76059	Soybean	cytosol, nucleus, peroxisome	41.19	39.34
KRH65525	Soybean	cytosol, peroxisome, plastid	42.43	38.42
KRH72766	Soybean	cytosol	29.8	35.5
KRH17127	Soybean	cytosol	36.04	35.43
KRG90608	Soybean	cytosol	18.88	28.95
KRH20947	Soybean	cytosol, nucleus, peroxisome	27.3	28.83
KRH02152	Soybean	cytosol	26.05	28.6
KRH36149	Soybean	cytosol	18.56	28.4
KRH50979	Soybean	cytosol	15.44	28.21
KRH47976	Soybean	cytosol	16.22	26.8
KRH11333	Soybean	cytosol	15.44	25.32
KRH64574	Soybean	cytosol	12.64	25.23
KRH16153	Soybean	cytosol	9.2	23.79
KRH18090	Soybean	cytosol	13.88	23.73
KRH15905	Soybean	cytosol	13.73	23.72
KRH05167	Soybean	cytosol	21.68	22.79
KRH53355	Soybean	cytosol	13.1	22.58
KRH15886	Soybean	cytosol	22.62	22.52
KRH38032	Soybean	cytosol	13.1	22.22
KRH03688	Soybean	cytosol	22.15	22.22
KRH20255	Soybean	cytosol	22.0	22.07
KRH61771	Soybean	cytosol	21.84	22.01
KRH62989	Soybean	cytosol	22.15	21.85
KRH04870	Soybean	cytosol	9.2	21.69
KRH52439	Soybean	cytosol, nucleus, peroxisome	21.22	21.32
KRH52037	Soybean	cytosol	12.32	19.55
KRH77049	Soybean	cytosol	15.91	19.54
KRH15408	Soybean	plastid	16.69	19.49
KRH28425	Soybean	cytosol	15.91	19.39
KRH57971	Soybean	cytosol	16.54	18.96
KRH04530	Soybean	cytosol	15.76	18.74
KRH05631	Soybean	plastid	16.07	18.29
KRH61346	Soybean	cytosol	10.92	10.03

Protein Annotations

EntrezGene:100810033	Gene3D:3.80.10.10	MapMan:35.1	EMBL:ACUP02012162	EnsemblPlantsGene:GLYMA_19G231200	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	UniProt:I1NBU6	InterPro:IPR001611	InterPro:IPR032675	EnsemblPlants:KRG96764
ProteinID:KRG96764	ProteinID:KRG96764.1	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_Cys-con_subtyp	PFAM:PF13516
PANTHER:PTHR44309	PANTHER:PTHR44309:SF2	SMART:SM00367	SUPFAM:SSF52047	UniParc:UPI000294C5CE	SEG:seg

Description

hypothetical protein

Coordinates

chr19:+:48182081..48187846

Molecular Weight (calculated)

70755.9 Da

IEP (calculated)

7.453

GRAVY (calculated)

0.324

Length

641 amino acids

Sequence
(BLAST)

001: MLSESVFCLL TEDLLIRVLE KLGPDRKPWR LVCKEFLRVE SATRKSIRIL RIEFLLRLLE RFCNIETLDL SLCPRIEDGV VSVVLSQGSA SWTRGLRRLV
101: LSRATGLDHV GLEMLIRACP VLEAVDVSHC WGYGDREAAA LSCAGRLREL NMDKCLGVTD IGLAKIAVGC GKLERLSLKW CLEISDLGID LLCKKCLDLK
201: FLDVSYLKVA SESLRSIASL LKLEVFIMVG CSLVDDVGLR FLEKGCPLLK AIDVSRCDCV SSSGLISVIS GHGGLEQLDA GYCLFELSAP LVKCLENLKQ
301: LRIIRIDGVR VSDFILQTIG TNCKLLVELG LSKCVGVTNK GIMQLVSGCG NLKILDLTCC QFISDTAIST IADSCPDLVC LKLESCDMVT ENCLYQLGLN
401: CSLLKELDLT DCSGIDDIAL RYLSRCSELV RLKLGLCTNI SDIGLAHIAC NCPKMTELDL YRCVRIGDDG LAALTSGCKG LTKLNLSYCN RITDRGMEYI
501: SHLGELSDLE LRGLSNITSI GIKEVAISCK RLADLDLKHC EKIDDSGFWA LAFYSQNLRQ INMSYCIVSD MVLCMLMGNL KRLQDAKLVC LSKVSVKGLE
601: VALRACCGRI KKVKLQRSLL FSLSSEMLET MHARGCKIRW D

Best Arabidopsis Sequence Match ( AT5G27920.1 )
(BLAST)

001: MSTSPSILSV LSEDLLVRVY ECLDPPCRKT WRLISKDFLR VDSLTRTTIR ILRVEFLPTL LFKYPNLSSL DLSVCPKLDD DVVLRLALDG AISTLGIKSL
101: NLSRSTAVRA RGLETLARMC HALERVDVSH CWGFGDREAA ALSSATGLRE LKMDKCLSLS DVGLARIVVG CSNLNKISLK WCMEISDLGI DLLCKICKGL
201: KSLDVSYLKI TNDSIRSIAL LVKLEVLDMV SCPLIDDGGL QFLENGSPSL QEVDVTRCDR VSLSGLISIV RGHPDIQLLK ASHCVSEVSG SFLKYIKGLK
301: HLKTIWIDGA HVSDSSLVSL SSSCRSLMEI GLSRCVDVTD IGMISLARNC LNLKTLNLAC CGFVTDVAIS AVAQSCRNLG TLKLESCHLI TEKGLQSLGC
401: YSMLVQELDL TDCYGVNDRG LEYISKCSNL QRLKLGLCTN ISDKGIFHIG SKCSKLLELD LYRCAGFGDD GLAALSRGCK SLNRLILSYC CELTDTGVEQ
501: IRQLELLSHL ELRGLKNITG VGLAAIASGC KKLGYLDVKL CENIDDSGFW ALAYFSKNLR QINLCNCSVS DTALCMLMSN LSRVQDVDLV HLSRVTVEGF
601: EFALRACCNR LKKLKLLAPL RFLLSSELLE TLHARGCRIR WD

Arabidopsis Description

At5g27920 [Source:UniProtKB/TrEMBL;Acc:Q8GZ31]
SUBAcon: [peroxisome,extracellular,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.