Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_08s0007g07030.t01 | Wine grape | cytosol | 65.08 | 70.29 |
| CDX71945 | Canola | cytosol | 62.7 | 67.14 |
| CDY06032 | Canola | cytosol | 61.9 | 66.29 |
| Solyc06g005380.2.1 | Tomato | cytosol | 60.32 | 65.9 |
| PGSC0003DMT400074998 | Potato | cytosol | 60.32 | 65.9 |
| AT3G58530.1 | Thale cress | cytosol | 61.11 | 65.44 |
| Bra007401.1-P | Field mustard | cytosol | 42.33 | 65.04 |
| EES04933 | Sorghum | cytosol | 57.14 | 61.89 |
| TraesCS3D01G067600.2 | Wheat | cytosol | 57.14 | 61.71 |
| HORVU3Hr1G012530.12 | Barley | cytosol | 57.14 | 61.54 |
| TraesCS3A01G067800.1 | Wheat | cytosol | 57.14 | 61.54 |
| Os02t0281150-01 | Rice | cytosol | 57.94 | 61.52 |
| TraesCS3B01G080300.1 | Wheat | cytosol | 56.61 | 60.97 |
| GSMUA_Achr2P17760_001 | Banana | cytosol | 56.08 | 59.89 |
| Zm00001d015974_P002 | Maize | cytosol | 55.82 | 58.94 |
| KRH16153 | Soybean | cytosol | 12.7 | 19.35 |
| KRG90608 | Soybean | cytosol | 20.63 | 18.66 |
| KRH36149 | Soybean | cytosol | 20.11 | 18.14 |
| KRH64574 | Soybean | cytosol | 15.08 | 17.76 |
| KRH52037 | Soybean | cytosol | 17.99 | 16.83 |
| KRH15905 | Soybean | cytosol | 15.61 | 15.9 |
| KRH53355 | Soybean | cytosol | 15.34 | 15.59 |
| KRH18090 | Soybean | cytosol | 15.34 | 15.47 |
| KRH02152 | Soybean | cytosol | 22.75 | 14.73 |
| KRH04870 | Soybean | cytosol | 10.32 | 14.34 |
| KRH20947 | Soybean | cytosol, nucleus, peroxisome | 22.49 | 14.0 |
| KRH05167 | Soybean | cytosol | 22.49 | 13.93 |
| KRH61771 | Soybean | cytosol | 23.02 | 13.68 |
| KRH52439 | Soybean | cytosol, nucleus, peroxisome | 23.02 | 13.64 |
| KRH20255 | Soybean | cytosol | 23.02 | 13.62 |
| KRH03688 | Soybean | cytosol | 22.49 | 13.3 |
| KRH76059 | Soybean | cytosol, nucleus, peroxisome | 23.55 | 13.26 |
| KRH72766 | Soybean | cytosol | 18.78 | 13.2 |
| KRH15408 | Soybean | plastid | 19.05 | 13.11 |
| KRG96764 | Soybean | cytosol | 22.22 | 13.1 |
| KRH65525 | Soybean | cytosol, peroxisome, plastid | 24.34 | 12.99 |
| KRH05631 | Soybean | plastid | 19.31 | 12.97 |
| KRH68483 | Soybean | cytosol | 21.96 | 12.95 |
| KRH62989 | Soybean | cytosol | 22.22 | 12.92 |
| KRH15886 | Soybean | cytosol | 21.96 | 12.89 |
| KRH17127 | Soybean | cytosol | 21.96 | 12.73 |
| KRH47976 | Soybean | cytosol | 12.7 | 12.37 |
| KRH11333 | Soybean | cytosol | 12.7 | 12.28 |
| KRH57971 | Soybean | cytosol | 17.72 | 11.99 |
| KRH04530 | Soybean | cytosol | 16.93 | 11.87 |
| KRH28425 | Soybean | cytosol | 16.4 | 11.79 |
| KRH77049 | Soybean | cytosol | 16.14 | 11.69 |
| KRH50979 | Soybean | cytosol | 10.32 | 11.11 |
| KRH61346 | Soybean | cytosol | 16.67 | 9.03 |
Protein Annotations
| EntrezGene:100818866 | Gene3D:3.80.10.10 | MapMan:35.1 | EMBL:ACUP02005584 | EnsemblPlantsGene:GLYMA_09G105500 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005829 | UniProt:I1L2J1 | InterPro:IPR001611 | InterPro:IPR032675 | EnsemblPlants:KRH38032 | ProteinID:KRH38032 |
| ProteinID:KRH38032.1 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_Cys-con_subtyp | PFAM:PF13516 | PANTHER:PTHR44001 |
| PANTHER:PTHR44001:SF1 | SMART:SM00367 | SUPFAM:SSF52047 | UniParc:UPI000295FA0D | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr9:+:19574801..19580083
Molecular Weight (calculated)
42667.1 Da
IEP (calculated)
8.229
GRAVY (calculated)
-0.066
Length
378 amino acids
Sequence
(BLAST)
(BLAST)
001: MRKHLKRYLV SDRKQKQKQE PELTRMEGES KEDVWCRETV PKVLKLVCST LPLSLSHTNL VSLLLVSPSL HRTLLCSQPL WQSLNFRELN NAGNRLIAAL
101: SLPRYCNVKQ INLEFARDVE DAHLILIMDK CFNSLQSLES LNLNGCQKIS DTGIEAITSC CPQLKSFSIY WNVRVTDRGL QHIVKNCKHI IDLNISGCKN
201: ISDQGAQLVA DNYPELESLN LTRCIKLTDD GLKSLLHKCL FLQSLNLYAL SSFTDEAYRK ICLLARLKFL DLCGAQNLSD EALSCISKCK NLESLNLTWC
301: VRVTDEGVIS IAKGCTSLEF LSLFGIVGVT DKCLEELSKS CSNKITTLDV NGCIGIKKRS REELLQLFPY LKCFKVHS
101: SLPRYCNVKQ INLEFARDVE DAHLILIMDK CFNSLQSLES LNLNGCQKIS DTGIEAITSC CPQLKSFSIY WNVRVTDRGL QHIVKNCKHI IDLNISGCKN
201: ISDQGAQLVA DNYPELESLN LTRCIKLTDD GLKSLLHKCL FLQSLNLYAL SSFTDEAYRK ICLLARLKFL DLCGAQNLSD EALSCISKCK NLESLNLTWC
301: VRVTDEGVIS IAKGCTSLEF LSLFGIVGVT DKCLEELSKS CSNKITTLDV NGCIGIKKRS REELLQLFPY LKCFKVHS
001: MEAKKVTEEE EETWRREIVT SVMRLVSTRL PQTDLISLLL VSPWLYRTLI SYPSIWLTIN LREMTNAGDR LLAALSLPRY RQVKHINLEF AQGVVDSHLK
101: LVKTECPDAL LSLEWLNLNV CQKISDNGIE AITSICPKLK VFSIYWNVRV TDAGIRNLVK NCRHITDLNL SGCKSLTDKS MQLVAESYPD LESLNITRCV
201: KITDDGLLQV LQKCFSLQTL NLYALSGFTD KAYMKISLLA DLRFLDICGA QNISDEGIGH IAKCNKLESL NLTWCVRITD AGVNTIANSC TSLEFLSLFG
301: IVGVTDRCLE TLSQTCSTTL TTLDVNGCTG IKRRSREELL QMFPRLTCFK VHS
101: LVKTECPDAL LSLEWLNLNV CQKISDNGIE AITSICPKLK VFSIYWNVRV TDAGIRNLVK NCRHITDLNL SGCKSLTDKS MQLVAESYPD LESLNITRCV
201: KITDDGLLQV LQKCFSLQTL NLYALSGFTD KAYMKISLLA DLRFLDICGA QNISDEGIGH IAKCNKLESL NLTWCVRITD AGVNTIANSC TSLEFLSLFG
301: IVGVTDRCLE TLSQTCSTTL TTLDVNGCTG IKRRSREELL QMFPRLTCFK VHS
Arabidopsis Description
F-box protein At3g58530 [Source:UniProtKB/Swiss-Prot;Acc:Q8LB33]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.