Factsheet for TraesCS3A01G067800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G080300.1	Wheat	cytosol	96.87	96.87
TraesCS3D01G067600.2	Wheat	cytosol	94.87	95.14
HORVU3Hr1G012530.12	Barley	cytosol	92.88	92.88
EES04933	Sorghum	cytosol	80.91	81.38
Os02t0281150-01	Rice	cytosol	80.63	79.49
Zm00001d015974_P002	Maize	cytosol	78.63	77.09
GSMUA_Achr2P17760_001	Banana	cytosol	64.67	64.12
PGSC0003DMT400074998	Potato	cytosol	61.25	62.14
Solyc06g005380.2.1	Tomato	cytosol	61.25	62.14
VIT_08s0007g07030.t01	Wine grape	cytosol	60.97	61.14
Bra007401.1-P	Field mustard	cytosol	42.17	60.16
CDY06032	Canola	cytosol	60.11	59.77
CDX71945	Canola	cytosol	60.11	59.77
AT3G58530.1	Thale cress	cytosol	57.83	57.51
KRH38032	Soybean	cytosol	61.54	57.14
TraesCS6A01G234100.2	Wheat	cytosol	20.51	17.27
TraesCS3A01G407700.1	Wheat	cytosol	16.81	15.53
TraesCS1A01G264900.1	Wheat	cytosol	15.95	15.14
TraesCS4A01G142500.3	Wheat	plastid	26.5	14.79
TraesCS5A01G161400.1	Wheat	cytosol, plastid	19.66	13.09
TraesCS5A01G150800.2	Wheat	mitochondrion	25.36	13.05
TraesCS7A01G377500.1	Wheat	cytosol	23.93	12.94
TraesCS5A01G091800.2	Wheat	cytosol	23.93	12.71
TraesCS6A01G181900.1	Wheat	cytosol	22.79	12.33
TraesCS2A01G359900.1	Wheat	cytosol	18.52	12.01
TraesCS4A01G230600.2	Wheat	plastid	11.4	9.88

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	InterPro:IPR001611	InterPro:IPR032675
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_Cys-con_subtyp	PFAM:PF13516	PANTHER:PTHR44001	SMART:SM00367
SUPFAM:SSF52047	EnsemblPlantsGene:TraesCS3A01G067800	EnsemblPlants:TraesCS3A01G067800.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr3A:-:40826588..40831583

Molecular Weight (calculated)

38704.9 Da

IEP (calculated)

6.810

GRAVY (calculated)

0.081

Length

351 amino acids

Sequence
(BLAST)

001: MAAAADEAWC RETVPRVMEL VSPRLPQRDA CALLSVSPWC HRSLAANPKL WEVLDLHETK KAGERLISAL SMARYRHLKV VNLEFAQDIE DRHFLHLKEM
101: GAILLEELEF LNLNACQKIS DTGIGAATSL CPNLRALSIY WIVGLTDAST EHIVKNCKQI IDLNLSGCKN ISDRGIQLVA DNYQGLQKLD ITRCIKLTDD
201: ALQKVLEKCS ALESLNMYAL SSFTDKAYTK IGYLANLTFL DLCGAQGSQN LTDDGLSSIS RCGSLTYLNL SWCVRVTDVG VVAIAQGCRT LELLSLFGIL
301: GVTDACLEAL SKSCSNSLTT LDVNGCTGIK RRSRDELIQL FPRLSCFKVH S

Best Arabidopsis Sequence Match ( AT3G58530.1 )
(BLAST)

001: MEAKKVTEEE EETWRREIVT SVMRLVSTRL PQTDLISLLL VSPWLYRTLI SYPSIWLTIN LREMTNAGDR LLAALSLPRY RQVKHINLEF AQGVVDSHLK
101: LVKTECPDAL LSLEWLNLNV CQKISDNGIE AITSICPKLK VFSIYWNVRV TDAGIRNLVK NCRHITDLNL SGCKSLTDKS MQLVAESYPD LESLNITRCV
201: KITDDGLLQV LQKCFSLQTL NLYALSGFTD KAYMKISLLA DLRFLDICGA QNISDEGIGH IAKCNKLESL NLTWCVRITD AGVNTIANSC TSLEFLSLFG
301: IVGVTDRCLE TLSQTCSTTL TTLDVNGCTG IKRRSREELL QMFPRLTCFK VHS

Arabidopsis Description

F-box protein At3g58530 [Source:UniProtKB/Swiss-Prot;Acc:Q8LB33]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.