Factsheet for HORVU3Hr1G012530.12

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G080300.1	Wheat	cytosol	94.87	94.87
TraesCS3A01G067800.1	Wheat	cytosol	92.88	92.88
TraesCS3D01G067600.2	Wheat	cytosol	92.59	92.86
EES04933	Sorghum	cytosol	80.34	80.8
Os02t0281150-01	Rice	cytosol	81.48	80.34
Zm00001d015974_P002	Maize	cytosol	78.06	76.54
GSMUA_Achr2P17760_001	Banana	cytosol	66.1	65.54
Solyc06g005380.2.1	Tomato	cytosol	62.11	63.01
PGSC0003DMT400074998	Potato	cytosol	62.11	63.01
VIT_08s0007g07030.t01	Wine grape	cytosol	60.68	60.86
CDX71945	Canola	cytosol	59.83	59.49
CDY06032	Canola	cytosol	59.83	59.49
Bra007401.1-P	Field mustard	cytosol	41.6	59.35
AT3G58530.1	Thale cress	cytosol	57.83	57.51
KRH38032	Soybean	cytosol	61.54	57.14
HORVU6Hr1G059950.1	Barley	cytosol	20.51	17.27
HORVU1Hr1G065030.2	Barley	cytosol	16.24	15.04
HORVU7Hr1G090240.1	Barley	cytosol	21.94	14.29
HORVU3Hr1G091200.4	Barley	cytosol	16.52	13.81
HORVU5Hr1G047420.2	Barley	cytosol, mitochondrion, plastid	25.07	13.04
HORVU5Hr1G050420.1	Barley	plastid	20.23	12.86
HORVU6Hr1G038430.3	Barley	plastid	23.65	12.71
HORVU0Hr1G005070.1	Barley	plastid	17.95	11.29
HORVU4Hr1G014630.1	Barley	cytosol	12.25	11.14
HORVU5Hr1G024060.1	Barley	cytosol, plastid	25.36	10.56
HORVU1Hr1G089690.1	Barley	cytosol, extracellular, mitochondrion	7.41	9.77
HORVU5Hr1G029670.1	Barley	mitochondrion	14.24	9.75
HORVU5Hr1G000950.4	Barley	plastid	11.68	9.17

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	UniProt:A0A287K4F4	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	EnsemblPlantsGene:HORVU3Hr1G012530
EnsemblPlants:HORVU3Hr1G012530.12	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_Cys-con_subtyp
PFAM:PF13516	PANTHER:PTHR44001	SMART:SM00367	SUPFAM:SSF52047	UniParc:UPI000B47A885	SEG:seg

Description

No Description!

Coordinates

chrchr3H:+:27032965..27038160

Molecular Weight (calculated)

38700.1 Da

IEP (calculated)

7.277

GRAVY (calculated)

0.137

Length

351 amino acids

Sequence
(BLAST)

001: MAAAADEAWC RETVPRVMAL VSPRLPQRDA CALLSVSPWC HRALAANPKL WEVLDLHEMK KAGERLISAL SLARYRHLKV VNLEFAQDIE DRHFLHLKET
101: GAVLLEELEL LNLNACQKIS DTGIEAATSI CPNLQALSIY WIVGLTDESI GHVVKNCKQI IDLNLSGCKN ISDRGIQLVA DNYQGLQKLD ITRCIKLTDD
201: ALQKVLEKCS ALESLNMYAL SSFTDKAYSK IGYLANLTFL DLCGAQRSQN LTDDGLSSIS RCGRLTYLNL SWCVRVTDVG VVAIAQGCRS LQLLSLFGIL
301: GVTDACLEVL SKSCLNSLTT LDVNGCTGIK KRSRNDLIQL FPLLSCFKVH S

Best Arabidopsis Sequence Match ( AT3G58530.1 )
(BLAST)

001: MEAKKVTEEE EETWRREIVT SVMRLVSTRL PQTDLISLLL VSPWLYRTLI SYPSIWLTIN LREMTNAGDR LLAALSLPRY RQVKHINLEF AQGVVDSHLK
101: LVKTECPDAL LSLEWLNLNV CQKISDNGIE AITSICPKLK VFSIYWNVRV TDAGIRNLVK NCRHITDLNL SGCKSLTDKS MQLVAESYPD LESLNITRCV
201: KITDDGLLQV LQKCFSLQTL NLYALSGFTD KAYMKISLLA DLRFLDICGA QNISDEGIGH IAKCNKLESL NLTWCVRITD AGVNTIANSC TSLEFLSLFG
301: IVGVTDRCLE TLSQTCSTTL TTLDVNGCTG IKRRSREELL QMFPRLTCFK VHS

Arabidopsis Description

F-box protein At3g58530 [Source:UniProtKB/Swiss-Prot;Acc:Q8LB33]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.