Factsheet for HORVU5Hr1G024060.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 2
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, nucleus, plastid
ChloroP:	plastid
MultiLoc:	cytosol
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G091800.2	Wheat	cytosol	76.99	98.18
TraesCS5B01G097800.2	Wheat	cytosol	76.63	97.73
TraesCS5D01G103900.3	Wheat	cytosol	76.87	97.3
Os12t0552700-01	Rice	cytosol, peroxisome	39.03	88.2
Zm00001d041635_P002	Maize	cytosol	66.79	84.92
KXG23663	Sorghum	cytosol	66.55	84.74
Zm00001d023825_P001	Maize	cytosol	65.6	83.79
GSMUA_Achr11P...	Banana	cytosol	47.81	61.43
GSMUA_Achr6P20450_001	Banana	cytosol	47.92	61.21
KRH68483	Soybean	cytosol	39.86	52.42
VIT_14s0060g01970.t01	Wine grape	cytosol, plastid	39.98	52.41
KRG96764	Soybean	cytosol	39.62	52.11
CDX88253	Canola	cytosol	37.84	49.84
Bra009931.1-P	Field mustard	cytosol	37.72	49.69
CDX80608	Canola	cytosol	37.6	49.53
CDY19741	Canola	cytosol	35.82	48.95
Bra036607.1-P	Field mustard	cytosol	37.01	48.83
CDY53337	Canola	cytosol	36.89	48.67
AT5G27920.1	Thale cress	cytosol, extracellular, peroxisome	36.89	48.44
Solyc01g099970.2.1	Tomato	extracellular	34.88	47.5
PGSC0003DMT400063732	Potato	cytosol	36.06	47.43
HORVU5Hr1G047420.2	Barley	cytosol, mitochondrion, plastid	30.13	37.63
HORVU6Hr1G059950.1	Barley	cytosol	15.66	31.65
HORVU3Hr1G012530.12	Barley	cytosol	10.56	25.36
HORVU4Hr1G014630.1	Barley	cytosol	11.39	24.87
HORVU7Hr1G090240.1	Barley	cytosol	15.9	24.86
HORVU6Hr1G038430.3	Barley	plastid	18.15	23.43
HORVU1Hr1G065030.2	Barley	cytosol	10.08	22.43
HORVU1Hr1G089690.1	Barley	cytosol, extracellular, mitochondrion	6.88	21.8
HORVU3Hr1G091200.4	Barley	cytosol	10.44	20.95
HORVU5Hr1G029670.1	Barley	mitochondrion	12.1	19.88
HORVU5Hr1G000950.4	Barley	plastid	10.32	19.46
HORVU5Hr1G050420.1	Barley	plastid	12.46	19.02
HORVU0Hr1G005070.1	Barley	plastid	11.39	17.2

Protein Annotations

EnsemblPlants:HORVU5Hr1G024060.1	EnsemblPlantsGene:HORVU5Hr1G024060	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_Cys-con_subtyp	PANTHER:PTHR44309
PANTHER:PTHR44309:SF2	PFAM:PF13516	SEG:seg	SMART:SM00367	SUPFAM:SSF52047	UniParc:UPI000B482A85
UniProt:A0A287QP55	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chrchr5H:-:129073595..129080897

Molecular Weight (calculated)

90900.7 Da

IEP (calculated)

8.452

GRAVY (calculated)

0.010

Length

843 amino acids

Sequence
(BLAST)

001: MQSSTDAVLS SSLPSSERKE KKSKAKKTMG GAAVRWTFWS SCSVSGDTST CGPRQALLRQ VLPIHIFLLP SSLPLPTPHP STHLPPSVPS PPPAVALPLL
101: RRPDQERSHR AAASRPARGS YHAEALRPIP TPQGRRRTAP PDPRRPPLPR RPLLPLHPDL SSTPRRQAGP RRRSCPVESS AAMSEEEAQR YGGGTGGGGV
201: GALSVDLLGQ VLDRVLERRD RKACRLVSRA FARAEAAHRR ALRVLRREPL PRLLRAFPAL ERLDLSACAS LDDASLAAAL AGADLGTVRQ VCLARASGVG
301: WRGLEALVAA CPRLEAVDLS HCVGAGDREA AALAAASGLR ELNLEKCLGV TDMGLAKVAV GCPRLETLSF KWCREISDIG VDLLVKKCRD LRSLDISYLK
401: VSNESLRSIS TLEKLEELAM VACSCIDDEG LELLSRGSNS LQSVDVSRCN HVTSQGLASL IDGHSFLQKL NAADSLHEIG QNFLSKLVTL KATLTVLRLD
501: GFEVSSSLLS AIGEGCTNLV EIGLSKCNGV TDEGISSLVA RCSYLRKIDL TCCNLVTNDS LDSIADNCKM LECLRLESCS SINEKGLERI ASCCPNLKEI
601: DLTDCGVNDE ALHHLAKCSE LLILKLGLSS SISDKGLGFI SSKCGKLIEL DLYRCSSITD DGLAALANGC KKIKLLNLCY CNKITDSGLS HLGALEELTN
701: LELRCLVRIT GIGISSVVIG CKSLVELDLK RCYSVDDSGL WALARYALNL RQLTISYCQV TGLGLCHLLS SLRCLQDVKM VHLSWVSIEG FEMALRAACG
801: RLKKLKILGG LKSVLSPDLL QLLQACGCRI RWVNKPLVYK DAI

Best Arabidopsis Sequence Match ( AT5G27920.1 )
(BLAST)

001: MSTSPSILSV LSEDLLVRVY ECLDPPCRKT WRLISKDFLR VDSLTRTTIR ILRVEFLPTL LFKYPNLSSL DLSVCPKLDD DVVLRLALDG AISTLGIKSL
101: NLSRSTAVRA RGLETLARMC HALERVDVSH CWGFGDREAA ALSSATGLRE LKMDKCLSLS DVGLARIVVG CSNLNKISLK WCMEISDLGI DLLCKICKGL
201: KSLDVSYLKI TNDSIRSIAL LVKLEVLDMV SCPLIDDGGL QFLENGSPSL QEVDVTRCDR VSLSGLISIV RGHPDIQLLK ASHCVSEVSG SFLKYIKGLK
301: HLKTIWIDGA HVSDSSLVSL SSSCRSLMEI GLSRCVDVTD IGMISLARNC LNLKTLNLAC CGFVTDVAIS AVAQSCRNLG TLKLESCHLI TEKGLQSLGC
401: YSMLVQELDL TDCYGVNDRG LEYISKCSNL QRLKLGLCTN ISDKGIFHIG SKCSKLLELD LYRCAGFGDD GLAALSRGCK SLNRLILSYC CELTDTGVEQ
501: IRQLELLSHL ELRGLKNITG VGLAAIASGC KKLGYLDVKL CENIDDSGFW ALAYFSKNLR QINLCNCSVS DTALCMLMSN LSRVQDVDLV HLSRVTVEGF
601: EFALRACCNR LKKLKLLAPL RFLLSSELLE TLHARGCRIR WD

Arabidopsis Description

At5g27920 [Source:UniProtKB/TrEMBL;Acc:Q8GZ31]
SUBAcon: [peroxisome,extracellular,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.