Factsheet for Bra036607.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY53337	Canola	cytosol	98.44	98.44
CDY19741	Canola	cytosol	93.43	96.76
Bra009931.1-P	Field mustard	cytosol	88.26	88.12
AT5G27920.1	Thale cress	cytosol, extracellular, peroxisome	86.07	85.67
VIT_14s0060g01970.t01	Wine grape	cytosol, plastid	59.47	59.1
KRH68483	Soybean	cytosol	58.53	58.35
KRG96764	Soybean	cytosol	57.9	57.72
PGSC0003DMT400063732	Potato	cytosol	53.99	53.82
Solyc01g099970.2.1	Tomato	extracellular	52.11	53.8
Os12t0552700-01	Rice	cytosol, peroxisome	28.95	49.6
GSMUA_Achr6P20450_001	Banana	cytosol	50.23	48.64
Zm00001d041635_P002	Maize	cytosol	50.39	48.57
KXG23663	Sorghum	cytosol	49.92	48.19
Zm00001d023825_P001	Maize	cytosol	49.3	47.73
GSMUA_Achr11P...	Banana	cytosol	48.67	47.41
TraesCS5A01G091800.2	Wheat	cytosol	48.83	47.2
TraesCS5B01G097800.2	Wheat	cytosol	48.67	47.05
TraesCS5D01G103900.3	Wheat	cytosol	48.83	46.85
Zm00001d048695_P001	Maize	cytosol	46.95	46.3
KXG29052	Sorghum	plastid	47.26	45.76
HORVU5Hr1G024060.1	Barley	cytosol, plastid	48.83	37.01
Bra005669.1-P	Field mustard	cytosol	37.25	35.63
Bra009671.1-P	Field mustard	cytosol	18.31	28.89
Bra029367.1-P	Field mustard	cytosol	17.84	27.74
Bra029656.1-P	Field mustard	cytosol	14.4	23.29
Bra012785.1-P	Field mustard	cytosol	22.85	23.25
Bra007401.1-P	Field mustard	cytosol	8.76	22.76
Bra009835.1-P	Field mustard	cytosol	21.13	21.7
Bra034254.1-P	Field mustard	cytosol	20.97	21.54
Bra015699.1-P	Field mustard	cytosol	11.89	21.47
Bra016422.1-P	Field mustard	cytosol	11.58	20.96
Bra036542.1-P	Field mustard	cytosol	20.19	20.94
Bra003692.1-P	Field mustard	cytosol	11.74	20.89
Bra029994.1-P	Field mustard	cytosol	16.43	20.55
Bra032213.1-P	Field mustard	plastid	16.12	20.04
Bra037120.1-P	Field mustard	cytosol	15.65	19.01

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	EnsemblPlantsGene:Bra036607	EnsemblPlants:Bra036607.1	EnsemblPlants:Bra036607.1-P	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
InterPro:Leu-rich_rpt_Cys-con_subtyp	UniProt:M4F698	PFAM:PF13516	PANTHER:PTHR44309	PANTHER:PTHR44309:SF2	SMART:SM00367
SUPFAM:SSF52047	UniParc:UPI0002541D70	SEG:seg	:	:	:

Description

AT5G27920 (E=3e-299) | F-box family protein

Coordinates

chrA09:+:1982748..1985569

Molecular Weight (calculated)

70488.4 Da

IEP (calculated)

8.011

GRAVY (calculated)

0.137

Length

639 amino acids

Sequence
(BLAST)

001: MPLSPSILSV LSEDLLVRVY GFLDPPCRKK WRLVSKEFHR VDSLSRTSIR ILRVEFLPAL LSNYPHLSSL DLSVCPKLDD DVVLRLASYG AVSIKSLNLS
101: RATALRARGL ETLARLCRGL ERVDVSHCWG FGDREAAALS VAAGLREVRL DKCLSLSDVG LARIVLGCSN LSKISLKWCM EISDLGIDLL CKKCKDLKSL
201: DVSYLKITND SIRSIALLPK LEVLEMVNCP LVDDDGLQYL ENGCPSLQEI DVTRCERVSL SGVVSIVRGH PDLQHLKASH CVSEVSLSFL HNIKALKHLK
301: TLWIDGARVS DSSLLTLSSS CRPLTDIGVS KCVGVTDIGI TGLARNCINL KTLNLACCGF VTDAAISAVA QSCRNLETLK LESCHMITEK GLQSLGCYSK
401: HLQELDLTDC YGVNDRGLEY ISKCSNLLRL KLGLCTNISD KGMFHIGSKC SKLLELDLYR CGGFGDDGLA AISRGCKSLN RLIISYCGEL TDTGVEQIRQ
501: LEHLSHLELR GLKNITGAGL AAVACGCKKL DYLDLKKCEN IDDSGFWALA YFARNLRQIN LCYCSVSDTA LCMLMSNLSR VQDVDLVNLN RVTVEGSEFA
601: LRACCNRLKK LKLFAPLRFL LSSELLEMLH ARGCRIRWD

Best Arabidopsis Sequence Match ( AT5G27920.1 )
(BLAST)

001: MSTSPSILSV LSEDLLVRVY ECLDPPCRKT WRLISKDFLR VDSLTRTTIR ILRVEFLPTL LFKYPNLSSL DLSVCPKLDD DVVLRLALDG AISTLGIKSL
101: NLSRSTAVRA RGLETLARMC HALERVDVSH CWGFGDREAA ALSSATGLRE LKMDKCLSLS DVGLARIVVG CSNLNKISLK WCMEISDLGI DLLCKICKGL
201: KSLDVSYLKI TNDSIRSIAL LVKLEVLDMV SCPLIDDGGL QFLENGSPSL QEVDVTRCDR VSLSGLISIV RGHPDIQLLK ASHCVSEVSG SFLKYIKGLK
301: HLKTIWIDGA HVSDSSLVSL SSSCRSLMEI GLSRCVDVTD IGMISLARNC LNLKTLNLAC CGFVTDVAIS AVAQSCRNLG TLKLESCHLI TEKGLQSLGC
401: YSMLVQELDL TDCYGVNDRG LEYISKCSNL QRLKLGLCTN ISDKGIFHIG SKCSKLLELD LYRCAGFGDD GLAALSRGCK SLNRLILSYC CELTDTGVEQ
501: IRQLELLSHL ELRGLKNITG VGLAAIASGC KKLGYLDVKL CENIDDSGFW ALAYFSKNLR QINLCNCSVS DTALCMLMSN LSRVQDVDLV HLSRVTVEGF
601: EFALRACCNR LKKLKLLAPL RFLLSSELLE TLHARGCRIR WD

Arabidopsis Description

At5g27920 [Source:UniProtKB/TrEMBL;Acc:Q8GZ31]
SUBAcon: [extracellular,cytosol,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.