Factsheet for Bra029656.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY35942	Canola	cytosol	95.95	95.95
AT3G07550.2	Thale cress	cytosol	82.53	82.53
KRH47976	Soybean	cytosol	54.43	55.41
PGSC0003DMT400053176	Potato	cytosol	52.91	53.59
Solyc06g007680.1.1	Tomato	cytosol	52.91	52.25
GSMUA_Achr8P28940_001	Banana	cytosol	46.58	48.42
Os11t0264200-01	Rice	cytosol	42.28	43.83
HORVU4Hr1G014630.1	Barley	cytosol	41.01	41.97
EES09509	Sorghum	cytosol	41.01	41.97
TraesCS4D01G083300.1	Wheat	cytosol	40.51	41.45
Zm00001d007294_P001	Maize	cytosol	38.23	37.19
TraesCS4B01G085300.2	Wheat	plastid	37.72	36.79
TraesCS4A01G230600.2	Wheat	plastid	37.47	36.54
Bra009671.1-P	Field mustard	cytosol	20.76	20.25
Bra029367.1-P	Field mustard	cytosol	20.0	19.22
Bra012785.1-P	Field mustard	cytosol	24.3	15.29
Bra016422.1-P	Field mustard	cytosol	13.42	15.01
Bra015699.1-P	Field mustard	cytosol	13.16	14.69
Bra009931.1-P	Field mustard	cytosol	23.54	14.53
Bra003692.1-P	Field mustard	cytosol	13.16	14.48
Bra036607.1-P	Field mustard	cytosol	23.29	14.4
Bra005669.1-P	Field mustard	cytosol	24.05	14.22
Bra029994.1-P	Field mustard	cytosol	17.97	13.89
Bra036542.1-P	Field mustard	cytosol	21.52	13.8
Bra037120.1-P	Field mustard	cytosol	18.23	13.69
Bra034254.1-P	Field mustard	cytosol	21.52	13.67
Bra009835.1-P	Field mustard	cytosol	20.76	13.18
Bra032213.1-P	Field mustard	plastid	15.95	12.26
Bra007401.1-P	Field mustard	cytosol	6.58	10.57

Protein Annotations

EnsemblPlants:Bra029656.1	EnsemblPlants:Bra029656.1-P	EnsemblPlantsGene:Bra029656	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:F-box-like_dom_sf	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
InterPro:Leu-rich_rpt_Cys-con_subtyp	PANTHER:PTHR44001	PANTHER:PTHR44001:SF1	PFAM:PF13516	SEG:seg	SMART:SM00367
SUPFAM:SSF52047	SUPFAM:SSF81383	UniParc:UPI0002547EDE	UniProt:M4ELI8	MapMan:35.1	:

Description

AT3G07550 (E=1e-190) | F-box family protein (FBL12)

Coordinates

chrA05:-:22782094..22783281

Molecular Weight (calculated)

43509.6 Da

IEP (calculated)

7.782

GRAVY (calculated)

0.058

Length

395 amino acids

Sequence
(BLAST)

001: MENVSESDDV RTSIIHLPDD CLSFIFQRLD NLDDHDSFGL TCHRFLNIQN INRRSLQFQC SLSLLNSPSL SQPTLAVNSD HLHRLLTRFQ WLEHLSLSGC
101: TVLNDSSLAS LRYPGARLHS LHLDCCYGVS DDGISTVASF CPNLRVVSLY RCSISDIGLE TLARAASLAL RCVNLSYCPL VSDFGVKALT QACLQIESVK
201: ISNCKSITGV GFINSSPTLS YVDAESCQLE PKGVAGIISG GGVEFLNISG PVSYIGKDGL VPIGSGVASR LRVLNLRMCR TVGDESIKAI AKGCPLLQEW
301: NLALCHEVRV EGWEAVGKWC CSLKRLHVNR CRNLCDQGLL GIRRGCKNLR ILYMNGNARL TSTAVEMFKL HRGDVTLRSE EVMVIGPDWR LYTRG

Best Arabidopsis Sequence Match ( AT3G07550.2 )
(BLAST)

001: MEDVSESDNN VETSIIHLPD DCLSFIFQRL DSVADHDSFG LTCHRWLNIQ NISRRSLQFQ CSFSVLNPSS LSQTNPDVSS HHLHRLLTRF QWLEHLSLSG
101: CTVLNDSSLD SLRYPGARLH TLYLDCCFGI SDDGISTIAS FCPNLSVVSL YRCNISDIGL ETLARASLSL KCVNLSYCPL VSDFGIKALS QACLQLESVK
201: ISNCKSITGV GFSGCSPTLG YVDADSCQLE PKGITGIISG GGIEFLNISG VSCYIRKDGL VPIGSGIASK LRILNLRMCR TVGDESIEAI AKGCPLLQEW
301: NLALCHEVKI SGWEAVGKWC RNLKKLHVNR CRNLCDQGLL ALRCGCMNLQ ILYMNGNARL TPTAIEMFRL HRADITLRTE EMMVIGPDWR LYAQE

Arabidopsis Description

FBL12F-box/LRR-repeat protein 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRR1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.