Factsheet for TraesCS4D01G083300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU4Hr1G014630.1	Barley	cytosol	92.75	92.75
TraesCS4B01G085300.2	Wheat	plastid	86.01	81.98
TraesCS4A01G230600.2	Wheat	plastid	85.49	81.48
Os11t0264200-01	Rice	cytosol	77.46	78.48
EES09509	Sorghum	cytosol	69.69	69.69
Zm00001d007294_P001	Maize	cytosol	62.44	59.36
GSMUA_Achr8P28940_001	Banana	cytosol	52.07	52.89
KRH47976	Soybean	cytosol	45.85	45.62
PGSC0003DMT400053176	Potato	cytosol	45.08	44.62
Solyc06g007680.1.1	Tomato	cytosol	44.56	43.0
AT3G07550.2	Thale cress	cytosol	41.97	41.01
CDY35942	Canola	cytosol	41.97	41.01
Bra029656.1-P	Field mustard	cytosol	41.45	40.51
CDY28039	Canola	cytosol	40.67	40.26
TraesCS6D01G216400.1	Wheat	cytosol	20.47	18.94
TraesCS3D01G402900.2	Wheat	cytosol	16.58	16.84
TraesCS1D01G265100.1	Wheat	cytosol	15.8	16.49
TraesCS4D01G148000.1	Wheat	cytosol	23.06	14.24
TraesCS5D01G103900.3	Wheat	cytosol	24.35	14.11
TraesCS5D01G155900.1	Wheat	mitochondrion	24.35	13.56
TraesCS6D01G169200.1	Wheat	cytosol	22.02	13.1
TraesCS2D01G358900.1	Wheat	mitochondrion, plastid	14.77	12.93
TraesCS5D01G166300.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	17.62	12.9
TraesCS7D01G373800.1	Wheat	cytosol	21.24	12.6
TraesCS3D01G067600.2	Wheat	cytosol	10.36	11.43

Protein Annotations

EnsemblPlants:TraesCS4D01G083300.1	EnsemblPlantsGene:TraesCS4D01G083300	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_Cys-con_subtyp	PANTHER:PTHR44001
PANTHER:PTHR44001:SF1	PFAM:PF13516	SMART:SM00367	SUPFAM:SSF52047	MapMan:35.1	:

Description

No Description!

Coordinates

chr4D:-:57076214..57077374

Molecular Weight (calculated)

42186.5 Da

IEP (calculated)

7.556

GRAVY (calculated)

0.174

Length

386 amino acids

Sequence
(BLAST)

001: MEKEMMDNSI EGCISCLSDD CLLSIFNKLE SESDKNAFGL TCKNWFKVRN IARKSLIFHF SFNAKEYKEH AQCLPKMLAR SPYLKLISLA GLSELSDSAL
101: YEVGVSGTSL QSFSLYSCSG ITDDGLAQVS IGCPNLVIVE LYRCLNITDL GLESLSKGCH SLKSLNLGYC TVISDRGISS IFRNCRNICA LIISYCRGVS
201: GVGFRGCPST LSYLEAESCM LSPEGMLDIS SGGGLQYINL YNLRSSVGLD CLGGVGSMKK LRVLNLRMCR YLTDDSVVAI ASGCPLIEEW SLAVCHGVRL
301: PGWSAIGLNC NKLRILHVNR CRNICDQGLQ ALKDGCVRLE VLHIHGCSKI TNNGLALFSI ARPSVKQMVD EAMSIGPSIE DLFRLQ

Best Arabidopsis Sequence Match ( AT3G07550.2 )
(BLAST)

001: MEDVSESDNN VETSIIHLPD DCLSFIFQRL DSVADHDSFG LTCHRWLNIQ NISRRSLQFQ CSFSVLNPSS LSQTNPDVSS HHLHRLLTRF QWLEHLSLSG
101: CTVLNDSSLD SLRYPGARLH TLYLDCCFGI SDDGISTIAS FCPNLSVVSL YRCNISDIGL ETLARASLSL KCVNLSYCPL VSDFGIKALS QACLQLESVK
201: ISNCKSITGV GFSGCSPTLG YVDADSCQLE PKGITGIISG GGIEFLNISG VSCYIRKDGL VPIGSGIASK LRILNLRMCR TVGDESIEAI AKGCPLLQEW
301: NLALCHEVKI SGWEAVGKWC RNLKKLHVNR CRNLCDQGLL ALRCGCMNLQ ILYMNGNARL TPTAIEMFRL HRADITLRTE EMMVIGPDWR LYAQE

Arabidopsis Description

FBL12F-box/LRR-repeat protein 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRR1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.