Factsheet for HORVU4Hr1G014630.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G083300.1	Wheat	cytosol	92.75	92.75
TraesCS4B01G085300.2	Wheat	plastid	82.12	78.27
TraesCS4A01G230600.2	Wheat	plastid	82.12	78.27
Os11t0264200-01	Rice	cytosol	75.39	76.38
EES09509	Sorghum	cytosol	68.13	68.13
Zm00001d007294_P001	Maize	cytosol	61.4	58.37
GSMUA_Achr8P28940_001	Banana	cytosol	51.55	52.37
KRH47976	Soybean	cytosol	44.82	44.59
PGSC0003DMT400053176	Potato	cytosol	44.56	44.1
Solyc06g007680.1.1	Tomato	cytosol	44.3	42.75
CDY35942	Canola	cytosol	42.75	41.77
AT3G07550.2	Thale cress	cytosol	42.23	41.27
Bra029656.1-P	Field mustard	cytosol	41.97	41.01
CDY28039	Canola	cytosol	41.19	40.77
HORVU6Hr1G059950.1	Barley	cytosol	20.21	18.7
HORVU1Hr1G065030.2	Barley	cytosol	16.06	16.36
HORVU3Hr1G091200.4	Barley	cytosol	16.58	15.24
HORVU1Hr1G089690.1	Barley	cytosol, extracellular, mitochondrion	9.84	14.29
HORVU5Hr1G047420.2	Barley	cytosol, mitochondrion, plastid	23.58	13.48
HORVU6Hr1G038430.3	Barley	plastid	22.28	13.17
HORVU0Hr1G005070.1	Barley	plastid	18.65	12.9
HORVU7Hr1G090240.1	Barley	cytosol	17.88	12.8
HORVU5Hr1G050420.1	Barley	plastid	17.88	12.5
HORVU3Hr1G012530.12	Barley	cytosol	11.14	12.25
HORVU5Hr1G029670.1	Barley	mitochondrion	16.06	12.09
HORVU5Hr1G024060.1	Barley	cytosol, plastid	24.87	11.39
HORVU5Hr1G000950.4	Barley	plastid	12.44	10.74

Protein Annotations

EnsemblPlants:HORVU4Hr1G014630.1	EnsemblPlantsGene:HORVU4Hr1G014630	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_Cys-con_subtyp	PANTHER:PTHR44001
PFAM:PF13516	SMART:SM00367	SUPFAM:SSF52047	UniParc:UPI000294DF26	UniProt:M0V6F2	MapMan:35.1

Description

No Description!

Coordinates

chrchr4H:+:54137157..54140698

Molecular Weight (calculated)

42072.1 Da

IEP (calculated)

7.229

GRAVY (calculated)

0.150

Length

386 amino acids

Sequence
(BLAST)

001: MERETMDNSV EGYISCLSDD CLLSIFNKLE NESDRNAFGL TCKNWFKVRN IARKSLIFHF SFNAKVYEEH AQCLPKMLAC SPYLKLISLA GLNELSDSAL
101: YEVGVSGTSL ESLSLYSCSG ITDDGLAQVS VRCPNLVIVE LYRCLNITDF GLESLSQGCH SLKSLNLGYC TGISDRGISS ILRNCRNICA LIISHCRGVS
201: GVGFRGCPST LSYLEAESCM LSPAGMLDIS SGGGLQYINL YNLRSSAGLD CLGGVGSMKK LRVLNLRMCR YLTDDSVVAI ASGCPLIEEW NLAVCHGVRL
301: PGWSAIGSNC NKLRILHVNR CRNICDQGLQ ALKDGCMRLE VLHIHGCGKV TTNGLALFSI ARPSVKQVVD EAMSIGPSIE DLFRLQ

Best Arabidopsis Sequence Match ( AT3G07550.2 )
(BLAST)

001: MEDVSESDNN VETSIIHLPD DCLSFIFQRL DSVADHDSFG LTCHRWLNIQ NISRRSLQFQ CSFSVLNPSS LSQTNPDVSS HHLHRLLTRF QWLEHLSLSG
101: CTVLNDSSLD SLRYPGARLH TLYLDCCFGI SDDGISTIAS FCPNLSVVSL YRCNISDIGL ETLARASLSL KCVNLSYCPL VSDFGIKALS QACLQLESVK
201: ISNCKSITGV GFSGCSPTLG YVDADSCQLE PKGITGIISG GGIEFLNISG VSCYIRKDGL VPIGSGIASK LRILNLRMCR TVGDESIEAI AKGCPLLQEW
301: NLALCHEVKI SGWEAVGKWC RNLKKLHVNR CRNLCDQGLL ALRCGCMNLQ ILYMNGNARL TPTAIEMFRL HRADITLRTE EMMVIGPDWR LYAQE

Arabidopsis Description

FBL12F-box/LRR-repeat protein 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRR1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.