Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra029656.1-P | Field mustard | cytosol | 82.53 | 82.53 |
| CDY28039 | Canola | cytosol | 81.01 | 82.05 |
| CDY35942 | Canola | cytosol | 81.77 | 81.77 |
| KRH47976 | Soybean | cytosol | 56.2 | 57.22 |
| PGSC0003DMT400053176 | Potato | cytosol | 55.19 | 55.9 |
| Solyc06g007680.1.1 | Tomato | cytosol | 55.19 | 54.5 |
| GSMUA_Achr8P28940_001 | Banana | cytosol | 48.86 | 50.79 |
| Os11t0264200-01 | Rice | cytosol | 42.28 | 43.83 |
| EES09509 | Sorghum | cytosol | 41.52 | 42.49 |
| HORVU4Hr1G014630.1 | Barley | cytosol | 41.27 | 42.23 |
| TraesCS4D01G083300.1 | Wheat | cytosol | 41.01 | 41.97 |
| Zm00001d007294_P001 | Maize | cytosol | 37.97 | 36.95 |
| TraesCS4B01G085300.2 | Wheat | plastid | 37.72 | 36.79 |
| TraesCS4A01G230600.2 | Wheat | plastid | 37.47 | 36.54 |
| AT5G23340.1 | Thale cress | cytosol | 22.28 | 21.73 |
| AT4G15475.1 | Thale cress | cytosol | 25.57 | 16.56 |
| AT1G21410.1 | Thale cress | cytosol | 13.67 | 15.0 |
| AT1G77000.1 | Thale cress | cytosol | 13.42 | 14.72 |
| AT5G27920.1 | Thale cress | cytosol, extracellular, peroxisome | 23.54 | 14.49 |
| AT5G01720.1 | Thale cress | vacuole | 24.05 | 14.29 |
| AT1G47056.1 | Thale cress | cytosol, plastid | 18.48 | 14.09 |
| AT5G67250.1 | Thale cress | cytosol | 18.48 | 13.85 |
| AT5G25350.1 | Thale cress | cytosol | 21.52 | 13.64 |
| AT4G07400.1 | Thale cress | nucleus | 18.73 | 13.36 |
| AT2G25490.1 | Thale cress | plastid | 21.01 | 13.22 |
| AT3G58530.1 | Thale cress | cytosol | 11.65 | 13.03 |
| AT3G50080.1 | Thale cress | cytosol | 16.71 | 12.64 |
Protein Annotations
| Gene3D:3.80.10.10 | MapMan:35.1 | EntrezGene:819944 | UniProt:A0A178VG45 | ProteinID:AAF02159.1 | ProteinID:AEE74559.1 |
| ProteinID:AEE74560.1 | EMBL:AK118929 | ArrayExpress:AT3G07550 | EnsemblPlantsGene:AT3G07550 | RefSeq:AT3G07550 | TAIR:AT3G07550 |
| RefSeq:AT3G07550-TAIR-G | EnsemblPlants:AT3G07550.2 | TAIR:AT3G07550.2 | Unigene:At.18420 | EMBL:BT008530 | InterPro:F-box-like_dom_sf |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR001611 | InterPro:IPR032675 | InterPro:LRR_dom_sf |
| InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_Cys-con_subtyp | RefSeq:NP_566312.1 | RefSeq:NP_850534.1 | ProteinID:OAP05330.1 | PFAM:PF13516 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PANTHER:PTHR44001 | PANTHER:PTHR44001:SF1 | UniProt:Q9SRR1 | SMART:SM00367 | SUPFAM:SSF52047 | SUPFAM:SSF81383 |
| UniParc:UPI00000ABF68 | SEG:seg | : | : | : | : |
Description
FBL12F-box/LRR-repeat protein 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRR1]
Coordinates
chr3:+:2409489..2411294
Molecular Weight (calculated)
43679.8 Da
IEP (calculated)
6.694
GRAVY (calculated)
0.067
Length
395 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDVSESDNN VETSIIHLPD DCLSFIFQRL DSVADHDSFG LTCHRWLNIQ NISRRSLQFQ CSFSVLNPSS LSQTNPDVSS HHLHRLLTRF QWLEHLSLSG
101: CTVLNDSSLD SLRYPGARLH TLYLDCCFGI SDDGISTIAS FCPNLSVVSL YRCNISDIGL ETLARASLSL KCVNLSYCPL VSDFGIKALS QACLQLESVK
201: ISNCKSITGV GFSGCSPTLG YVDADSCQLE PKGITGIISG GGIEFLNISG VSCYIRKDGL VPIGSGIASK LRILNLRMCR TVGDESIEAI AKGCPLLQEW
301: NLALCHEVKI SGWEAVGKWC RNLKKLHVNR CRNLCDQGLL ALRCGCMNLQ ILYMNGNARL TPTAIEMFRL HRADITLRTE EMMVIGPDWR LYAQE
101: CTVLNDSSLD SLRYPGARLH TLYLDCCFGI SDDGISTIAS FCPNLSVVSL YRCNISDIGL ETLARASLSL KCVNLSYCPL VSDFGIKALS QACLQLESVK
201: ISNCKSITGV GFSGCSPTLG YVDADSCQLE PKGITGIISG GGIEFLNISG VSCYIRKDGL VPIGSGIASK LRILNLRMCR TVGDESIEAI AKGCPLLQEW
301: NLALCHEVKI SGWEAVGKWC RNLKKLHVNR CRNLCDQGLL ALRCGCMNLQ ILYMNGNARL TPTAIEMFRL HRADITLRTE EMMVIGPDWR LYAQE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.