Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 2
- endoplasmic reticulum 2
- vacuole 3
- plasma membrane 2
- golgi 2
- cytosol 1
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra005669.1-P | Field mustard | cytosol | 86.62 | 86.23 |
| CDY11182 | Canola | cytosol, endoplasmic reticulum, nucleus | 87.22 | 85.8 |
| CDX80753 | Canola | endoplasmic reticulum | 86.47 | 85.06 |
| VIT_08s0058g00700.t01 | Wine grape | cytosol | 65.86 | 66.06 |
| PGSC0003DMT400030966 | Potato | cytosol, plasma membrane, plastid | 63.31 | 63.31 |
| Solyc10g076290.1.1 | Tomato | cytosol | 63.76 | 62.81 |
| KRH76059 | Soybean | cytosol, nucleus, peroxisome | 62.86 | 62.3 |
| KRH65525 | Soybean | cytosol, peroxisome, plastid | 63.76 | 59.89 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, peroxisome | 55.79 | 51.96 |
| GSMUA_Achr7P22290_001 | Banana | cytosol | 55.49 | 51.54 |
| KXG22793 | Sorghum | nucleus | 51.28 | 48.99 |
| TraesCS5A01G150800.2 | Wheat | mitochondrion | 50.08 | 48.83 |
| Zm00001d044622_P002 | Maize | mitochondrion | 51.13 | 48.3 |
| TraesCS5B01G149400.1 | Wheat | mitochondrion | 49.47 | 48.24 |
| Os12t0108500-01 | Rice | cytosol, plasma membrane, plastid | 50.53 | 48.21 |
| EES07863 | Sorghum | nucleus | 49.92 | 48.05 |
| HORVU5Hr1G047420.2 | Barley | cytosol, mitochondrion, plastid | 48.57 | 47.85 |
| TraesCS5D01G155900.1 | Wheat | mitochondrion | 49.02 | 47.04 |
| Zm00001d005072_P003 | Maize | mitochondrion | 50.38 | 46.21 |
| Os11t0108932-01 | Rice | nucleus | 21.5 | 45.83 |
| AT5G27920.1 | Thale cress | cytosol, extracellular, peroxisome | 36.84 | 38.16 |
| AT5G23340.1 | Thale cress | cytosol | 16.24 | 26.67 |
| AT4G15475.1 | Thale cress | cytosol | 24.21 | 26.39 |
| AT1G77000.1 | Thale cress | cytosol | 13.68 | 25.28 |
| AT3G58530.1 | Thale cress | cytosol | 13.08 | 24.65 |
| AT1G21410.1 | Thale cress | cytosol | 13.08 | 24.17 |
| AT3G07550.2 | Thale cress | cytosol | 14.29 | 24.05 |
| AT2G25490.1 | Thale cress | plastid | 22.26 | 23.57 |
| AT5G25350.1 | Thale cress | cytosol | 21.5 | 22.95 |
| AT1G47056.1 | Thale cress | cytosol, plastid | 15.94 | 20.46 |
| AT4G07400.1 | Thale cress | nucleus | 16.24 | 19.49 |
| AT3G50080.1 | Thale cress | cytosol | 14.89 | 18.97 |
| AT5G67250.1 | Thale cress | cytosol | 14.74 | 18.6 |
Protein Annotations
| Gene3D:3.80.10.10 | MapMan:35.1 | EntrezGene:831688 | ProteinID:AED90382.1 | EMBL:AK229588 | ArrayExpress:AT5G01720 |
| EnsemblPlantsGene:AT5G01720 | RefSeq:AT5G01720 | TAIR:AT5G01720 | RefSeq:AT5G01720-TAIR-G | EnsemblPlants:AT5G01720.1 | TAIR:AT5G01720.1 |
| EMBL:AY086589 | EMBL:AY091103 | EMBL:AY122938 | ProteinID:CAB82288.1 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:IPR001611 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_Cys-con_subtyp |
| RefSeq:NP_568094.2 | PFAM:PF13516 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020100 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR44309 | PANTHER:PTHR44309:SF3 |
| UniProt:Q8RWU5 | SMART:SM00367 | SUPFAM:SSF52047 | UniParc:UPI00000A54B0 | SEG:seg | : |
Description
FBL3F-box/LRR-repeat protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWU5]
Coordinates
chr5:-:266278..270646
Molecular Weight (calculated)
72278.8 Da
IEP (calculated)
8.269
GRAVY (calculated)
0.155
Length
665 amino acids
Sequence
(BLAST)
(BLAST)
001: MKKVKQIRVL KPFDLLSEEL VFIILDLISP NPSDLKSFSL TCKSFYQLES KHRGSLKPLR SDYLPRILTR YRNTTDLDLT FCPRVTDYAL SVVGCLSGPT
101: LRSLDLSRSG SFSAAGLLRL ALKCVNLVEI DLSNATEMRD ADAAVVAEAR SLERLKLGRC KMLTDMGIGC IAVGCKKLNT VSLKWCVGVG DLGVGLLAVK
201: CKDIRTLDLS YLPITGKCLH DILKLQHLEE LLLEGCFGVD DDSLKSLRHD CKSLKKLDAS SCQNLTHRGL TSLLSGAGYL QRLDLSHCSS VISLDFASSL
301: KKVSALQSIR LDGCSVTPDG LKAIGTLCNS LKEVSLSKCV SVTDEGLSSL VMKLKDLRKL DITCCRKLSR VSITQIANSC PLLVSLKMES CSLVSREAFW
401: LIGQKCRLLE ELDLTDNEID DEGLKSISSC LSLSSLKLGI CLNITDKGLS YIGMGCSNLR ELDLYRSVGI TDVGISTIAQ GCIHLETINI SYCQDITDKS
501: LVSLSKCSLL QTFESRGCPN ITSQGLAAIA VRCKRLAKVD LKKCPSINDA GLLALAHFSQ NLKQINVSDT AVTEVGLLSL ANIGCLQNIA VVNSSGLRPS
601: GVAAALLGCG GLRKAKLHAS LRSLLPLSLI HHLEARGCAF LWKDNTLQAE LDPKYWKQQL EEMAP
101: LRSLDLSRSG SFSAAGLLRL ALKCVNLVEI DLSNATEMRD ADAAVVAEAR SLERLKLGRC KMLTDMGIGC IAVGCKKLNT VSLKWCVGVG DLGVGLLAVK
201: CKDIRTLDLS YLPITGKCLH DILKLQHLEE LLLEGCFGVD DDSLKSLRHD CKSLKKLDAS SCQNLTHRGL TSLLSGAGYL QRLDLSHCSS VISLDFASSL
301: KKVSALQSIR LDGCSVTPDG LKAIGTLCNS LKEVSLSKCV SVTDEGLSSL VMKLKDLRKL DITCCRKLSR VSITQIANSC PLLVSLKMES CSLVSREAFW
401: LIGQKCRLLE ELDLTDNEID DEGLKSISSC LSLSSLKLGI CLNITDKGLS YIGMGCSNLR ELDLYRSVGI TDVGISTIAQ GCIHLETINI SYCQDITDKS
501: LVSLSKCSLL QTFESRGCPN ITSQGLAAIA VRCKRLAKVD LKKCPSINDA GLLALAHFSQ NLKQINVSDT AVTEVGLLSL ANIGCLQNIA VVNSSGLRPS
601: GVAAALLGCG GLRKAKLHAS LRSLLPLSLI HHLEARGCAF LWKDNTLQAE LDPKYWKQQL EEMAP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.