Factsheet for TraesCS5B01G149400.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
cytosol 1
extracellular 1
golgi 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid, secretory
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G150800.2	Wheat	mitochondrion	96.48	96.48
HORVU5Hr1G047420.2	Barley	cytosol, mitochondrion, plastid	93.84	94.81
TraesCS5D01G155900.1	Wheat	mitochondrion	93.99	92.5
Zm00001d044622_P002	Maize	mitochondrion	79.18	76.7
EES07863	Sorghum	nucleus	77.13	76.12
KXG22793	Sorghum	nucleus	77.13	75.57
Os12t0108500-01	Rice	cytosol, plasma membrane, plastid	76.39	74.75
Zm00001d005072_P003	Maize	mitochondrion	75.66	71.17
Os11t0108932-01	Rice	nucleus	32.55	71.15
GSMUA_Achr10P...	Banana	cytosol, nucleus, peroxisome	58.65	56.02
GSMUA_Achr7P22290_001	Banana	cytosol	58.5	55.73
VIT_08s0058g00700.t01	Wine grape	cytosol	51.47	52.94
PGSC0003DMT400030966	Potato	cytosol, plasma membrane, plastid	50.88	52.18
KRH76059	Soybean	cytosol, nucleus, peroxisome	50.29	51.12
Solyc10g076290.1.1	Tomato	cytosol	50.59	51.11
VIT_06s0004g07520.t01	Wine grape	cytosol	48.39	49.85
AT5G01720.1	Thale cress	vacuole	48.24	49.47
KRH65525	Soybean	cytosol, peroxisome, plastid	50.73	48.87
Bra005669.1-P	Field mustard	cytosol	47.65	48.65
KRH17127	Soybean	cytosol	46.33	48.47
CDY11182	Canola	cytosol, endoplasmic reticulum, nucleus	47.8	48.22
CDX80753	Canola	endoplasmic reticulum	47.51	47.93
KRH72766	Soybean	cytosol	35.48	44.98
TraesCS5B01G097800.2	Wheat	cytosol	36.22	37.37
TraesCS6B01G262900.1	Wheat	cytosol	16.57	27.1
TraesCS3B01G080300.1	Wheat	cytosol	13.2	25.64
TraesCS4B01G085300.2	Wheat	plastid	13.2	22.22
TraesCS5B01G158800.1	Wheat	plastid	15.98	20.68
TraesCS1B01G275600.1	Wheat	cytosol	11.44	20.58
TraesCS6B01G210700.1	Wheat	cytosol	19.5	20.49
TraesCS7B01G278800.1	Wheat	cytosol	19.21	20.25
TraesCS3B01G440600.2	Wheat	cytosol	11.14	19.95

Protein Annotations

EnsemblPlants:TraesCS5B01G149400.1	EnsemblPlantsGene:TraesCS5B01G149400	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_Cys-con_subtyp	PANTHER:PTHR44309
PANTHER:PTHR44309:SF3	PFAM:PF13516	SEG:seg	SMART:SM00367	SUPFAM:SSF52047	MapMan:35.1

Description

No Description!

Coordinates

chr5B:-:277265780..277269091

Molecular Weight (calculated)

73456.7 Da

IEP (calculated)

8.157

GRAVY (calculated)

0.260

Length

682 amino acids

Sequence
(BLAST)

001: MAMATHGHLH KRRRVCPAAA AAAAAPIDSL ADELLFLVLD RVAAADPRAL KSFALASRAC HAAESRHRRV LRPYRADLLR AALARYPTAV RLDLTLCPRV
101: PGAALAALSS APMPCLRAVD LSRSRGFGAP GLAALVAACP GLADLDLSNG VDLGDAAAAE LARARGLQRL CLSRCKPMTD MGLGCIAVGC PDLRELTLNW
201: CLGITDLGVQ LLALKCKKLR TLNLSYTMIS KDCLPAIMKL PNLEVLALVG CVGIDDDALS GPENECSKSL RVLDMSTCRN VTHAGVSSVV KAVPNLLELN
301: LSYCCNVTPS MGRCFQILPK LQTLKLEGCK FMADGLKYIG ISCVSLRELS LSKCSGMTDT DLSFVVSRLK NLLKLDITCN RNITDVSLAA ITSSCPSLIS
401: LRMESCSHFS SEGLRLIGKR FCHLEELDIT DSDLDDEGLK ALSGCRKLSS LKIGICMRIS DEALIHIGKS CPELRDIDLY RSGGISDEGV TQIAQGCPML
501: ESINLSYCTE ITDVSLVSLS KCAKLNTLEI RGCPSVSSAG LSEIAIGCRL LAKLDIKKCF AINDVGMLFL SQFSHSLRQI NLSYCSVTDI GLLSLSSICG
601: LQNMTIVHLA GITPNGLMAA LMVSGGLTRV KLHAAFRSMM PPHMLKVVEA RGCAFQWIDK PFKVEQERCD IWQQQSRDVL VR

Best Arabidopsis Sequence Match ( AT5G01720.1 )
(BLAST)

001: MKKVKQIRVL KPFDLLSEEL VFIILDLISP NPSDLKSFSL TCKSFYQLES KHRGSLKPLR SDYLPRILTR YRNTTDLDLT FCPRVTDYAL SVVGCLSGPT
101: LRSLDLSRSG SFSAAGLLRL ALKCVNLVEI DLSNATEMRD ADAAVVAEAR SLERLKLGRC KMLTDMGIGC IAVGCKKLNT VSLKWCVGVG DLGVGLLAVK
201: CKDIRTLDLS YLPITGKCLH DILKLQHLEE LLLEGCFGVD DDSLKSLRHD CKSLKKLDAS SCQNLTHRGL TSLLSGAGYL QRLDLSHCSS VISLDFASSL
301: KKVSALQSIR LDGCSVTPDG LKAIGTLCNS LKEVSLSKCV SVTDEGLSSL VMKLKDLRKL DITCCRKLSR VSITQIANSC PLLVSLKMES CSLVSREAFW
401: LIGQKCRLLE ELDLTDNEID DEGLKSISSC LSLSSLKLGI CLNITDKGLS YIGMGCSNLR ELDLYRSVGI TDVGISTIAQ GCIHLETINI SYCQDITDKS
501: LVSLSKCSLL QTFESRGCPN ITSQGLAAIA VRCKRLAKVD LKKCPSINDA GLLALAHFSQ NLKQINVSDT AVTEVGLLSL ANIGCLQNIA VVNSSGLRPS
601: GVAAALLGCG GLRKAKLHAS LRSLLPLSLI HHLEARGCAF LWKDNTLQAE LDPKYWKQQL EEMAP

Arabidopsis Description

FBL3F-box/LRR-repeat protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWU5]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.