Factsheet for Zm00001d044622_P002

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG22793	Sorghum	nucleus	88.64	89.66
EES07863	Sorghum	nucleus	86.79	88.42
Zm00001d005072_P003	Maize	mitochondrion	88.07	85.52
TraesCS5B01G149400.1	Wheat	mitochondrion	76.7	79.18
HORVU5Hr1G047420.2	Barley	cytosol, mitochondrion, plastid	75.85	79.11
TraesCS5A01G150800.2	Wheat	mitochondrion	76.42	78.89
TraesCS5D01G155900.1	Wheat	mitochondrion	74.72	75.9
Os12t0108500-01	Rice	cytosol, plasma membrane, plastid	72.16	72.88
Os11t0108932-01	Rice	nucleus	30.54	68.91
GSMUA_Achr10P...	Banana	cytosol, nucleus, peroxisome	57.53	56.72
GSMUA_Achr7P22290_001	Banana	cytosol	56.68	55.73
KRH76059	Soybean	cytosol, nucleus, peroxisome	52.13	54.69
VIT_08s0058g00700.t01	Wine grape	cytosol	50.85	54.0
PGSC0003DMT400030966	Potato	cytosol, plasma membrane, plastid	50.57	53.53
Solyc10g076290.1.1	Tomato	cytosol	50.71	52.89
KRH65525	Soybean	cytosol, peroxisome, plastid	52.56	52.26
VIT_06s0004g07520.t01	Wine grape	cytosol	49.01	52.11
Bra005669.1-P	Field mustard	cytosol	48.58	51.2
AT5G01720.1	Thale cress	vacuole	48.3	51.13
CDY11182	Canola	cytosol, endoplasmic reticulum, nucleus	48.72	50.74
CDX80753	Canola	endoplasmic reticulum	48.15	50.15
KRH17127	Soybean	cytosol	44.89	48.47
KRH72766	Soybean	cytosol	34.8	45.54
Zm00001d023825_P001	Maize	cytosol	38.35	40.91
Zm00001d041635_P002	Maize	cytosol	38.21	40.57
Zm00001d048695_P001	Maize	cytosol	36.65	39.81
Zm00001d007640_P001	Maize	cytosol	24.57	27.55
Zm00001d051219_P001	Maize	cytosol	15.77	26.62
Zm00001d007294_P001	Maize	cytosol	14.06	24.38
Zm00001d015974_P002	Maize	cytosol	12.36	24.3
Zm00001d015778_P001	Maize	cytosol	20.31	22.24
Zm00001d053642_P001	Maize	cytosol	20.45	22.12
Zm00001d038224_P004	Maize	cytosol	11.51	22.01
Zm00001d003103_P001	Maize	plastid	15.77	21.35
Zm00001d019677_P001	Maize	cytosol	15.91	21.33
Zm00001d000224_P001	Maize	cytosol	12.5	20.32
Zm00001d036880_P003	Maize	cytosol	21.16	20.24
Zm00001d000408_P001	Maize	cytosol	21.02	19.92
Zm00001d037295_P001	Maize	mitochondrion	6.82	19.67
Zm00001d025808_P001	Maize	plastid	15.06	19.41
Zm00001d025812_P001	Maize	plastid	15.06	19.41
Zm00001d028552_P001	Maize	cytosol, extracellular, mitochondrion, plastid	6.11	19.37
Zm00001d039723_P001	Maize	cytosol, extracellular, plastid	6.25	18.88

Protein Annotations

EnsemblPlants:Zm00001d044622_P002	EnsemblPlants:Zm00001d044622_T002	EnsemblPlantsGene:Zm00001d044622	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_Cys-con_subtyp
PANTHER:PTHR44309	PANTHER:PTHR44309:SF3	PFAM:PF13516	ProteinID:ONM42062.1	SEG:seg	SMART:SM00367
SMART:SM00368	SUPFAM:SSF52047	UniParc:UPI0008429527	UniProt:A0A1D6NQ35	MapMan:35.1	:

Description

F-box/LRR-repeat protein 3

Coordinates

chr3:+:233498011..233502120

Molecular Weight (calculated)

75720.9 Da

IEP (calculated)

8.044

GRAVY (calculated)

0.203

Length

704 amino acids

Sequence
(BLAST)

001: MAMAAQQHRH HKRRRIALSP SPSPSLAPIP GAPTPPLDSL ADELLFLVLD RVAQADPRAL KSFALASRAC HAAESRHRRT LRPLRADLLP AALARYPSAT
101: RLDLTLCARV PDAALASAAV SGSSALRAVD LSRSRGFGAA GVAALAAACP DLADLDLSNG VHLGDAAAAE VARARALRRL SLVRWKPLTD MGLGCVAVGC
201: TELKDLSLKW CLGLTDLGIQ LLALKCRKLT SLDLSYTMIT KDSLPSIMKL PNLQELTLVG CIGIDDGALV SLERECSKSL QVLDMSQCQN ITDVGVSSIL
301: KSVPNLLELD LSYCCPVTPS MVRNFQKLPK LQALKLEGCK FMANGLKAIG TSCVSLRELS LSKSSGVTDT ELSFVVSRLK NLLKLDITCC RSITDVSLAA
401: ITSSCTSLIS LRMESCSHVS SGALQLIGKH CSHLEELDLT DSDLDDEGLK ALARCSELSS LKIGICLKIS DEGLSHIGRS CPKLREIDLY RCGVISDDGI
501: IQIAQGCPML ESINLSYCTE ITDRSLISLS KCAKLNTLEI RGCPSVSSIG LSEIAMGCRL LSKLDIKKCF GINDVGMLYL SQFAHSLRQI NLSYCSVTDV
601: GLLSLSSISG LQNMTIVHLA GITPNGLTAT LMVCGGLTKV KLHEAFRSMM PPHTIKNVEA RGCVFQWIDK PFKVFYCSPG CFTHSVEVEP CDVWKQQSQD
701: VLVR

Best Arabidopsis Sequence Match ( AT5G01720.1 )
(BLAST)

001: MKKVKQIRVL KPFDLLSEEL VFIILDLISP NPSDLKSFSL TCKSFYQLES KHRGSLKPLR SDYLPRILTR YRNTTDLDLT FCPRVTDYAL SVVGCLSGPT
101: LRSLDLSRSG SFSAAGLLRL ALKCVNLVEI DLSNATEMRD ADAAVVAEAR SLERLKLGRC KMLTDMGIGC IAVGCKKLNT VSLKWCVGVG DLGVGLLAVK
201: CKDIRTLDLS YLPITGKCLH DILKLQHLEE LLLEGCFGVD DDSLKSLRHD CKSLKKLDAS SCQNLTHRGL TSLLSGAGYL QRLDLSHCSS VISLDFASSL
301: KKVSALQSIR LDGCSVTPDG LKAIGTLCNS LKEVSLSKCV SVTDEGLSSL VMKLKDLRKL DITCCRKLSR VSITQIANSC PLLVSLKMES CSLVSREAFW
401: LIGQKCRLLE ELDLTDNEID DEGLKSISSC LSLSSLKLGI CLNITDKGLS YIGMGCSNLR ELDLYRSVGI TDVGISTIAQ GCIHLETINI SYCQDITDKS
501: LVSLSKCSLL QTFESRGCPN ITSQGLAAIA VRCKRLAKVD LKKCPSINDA GLLALAHFSQ NLKQINVSDT AVTEVGLLSL ANIGCLQNIA VVNSSGLRPS
601: GVAAALLGCG GLRKAKLHAS LRSLLPLSLI HHLEARGCAF LWKDNTLQAE LDPKYWKQQL EEMAP

Arabidopsis Description

FBL3F-box/LRR-repeat protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWU5]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.