Factsheet for VIT_08s0058g00700.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400030966	Potato	cytosol, plasma membrane, plastid	74.81	74.59
Solyc10g076290.1.1	Tomato	cytosol	74.96	73.63
KRH76059	Soybean	cytosol, nucleus, peroxisome	69.68	68.85
VIT_06s0004g07520.t01	Wine grape	cytosol	67.72	67.82
AT5G01720.1	Thale cress	vacuole	66.06	65.86
KRH65525	Soybean	cytosol, peroxisome, plastid	69.83	65.4
CDY11182	Canola	cytosol, endoplasmic reticulum, nucleus	64.86	63.61
Bra005669.1-P	Field mustard	cytosol	63.95	63.47
CDX80753	Canola	endoplasmic reticulum	63.65	62.43
GSMUA_Achr7P22290_001	Banana	cytosol	64.56	59.78
GSMUA_Achr10P...	Banana	cytosol, nucleus, peroxisome	63.35	58.82
KXG22793	Sorghum	nucleus	54.45	51.87
TraesCS5A01G150800.2	Wheat	mitochondrion	53.24	51.76
TraesCS5B01G149400.1	Wheat	mitochondrion	52.94	51.47
HORVU5Hr1G047420.2	Barley	cytosol, mitochondrion, plastid	52.34	51.41
Os12t0108500-01	Rice	cytosol, plasma membrane, plastid	54.0	51.36
EES07863	Sorghum	nucleus	53.24	51.09
Zm00001d044622_P002	Maize	mitochondrion	54.0	50.85
TraesCS5D01G155900.1	Wheat	mitochondrion	52.34	50.07
Zm00001d005072_P003	Maize	mitochondrion	53.24	48.69
Os11t0108932-01	Rice	nucleus	21.27	45.19
VIT_14s0060g01970.t01	Wine grape	cytosol, plastid	39.06	40.28
VIT_10s0071g00310.t01	Wine grape	cytosol	17.8	28.57
VIT_05s0020g02400.t01	Wine grape	cytosol	24.13	26.19
VIT_08s0007g07030.t01	Wine grape	cytosol	12.22	23.14
VIT_04s0008g05470.t01	Wine grape	cytosol	22.78	22.64
VIT_11s0016g05410.t01	Wine grape	cytosol	22.32	22.32
VIT_18s0001g09940.t01	Wine grape	plastid	17.04	20.89
VIT_07s0129g01110.t01	Wine grape	plastid	17.5	20.6
VIT_18s0001g15010.t01	Wine grape	mitochondrion	12.22	18.93
VIT_18s0072g00820.t01	Wine grape	cytosol, extracellular, peroxisome	13.88	17.1

Protein Annotations

EntrezGene:100258428	wikigene:100258428	Gene3D:3.80.10.10	MapMan:35.1	ProteinID:CBI18091	ProteinID:CBI18091.3
UniProt:D7SR46	EMBL:FN594967	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001611
InterPro:IPR032675	EntrezGene:LOC100258428	wikigene:LOC100258428	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_Cys-con_subtyp
PFAM:PF13516	PANTHER:PTHR44309	PANTHER:PTHR44309:SF1	SMART:SM00367	SUPFAM:SSF52047	UniParc:UPI0001983D65
ArrayExpress:VIT_08s0058g00700	EnsemblPlantsGene:VIT_08s0058g00700	EnsemblPlants:VIT_08s0058g00700.t01	unigene:Vvi.23290	RefSeq:XP_002265215	RefSeq:XP_002265215.1
RefSeq:XP_019077423.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr8:-:9808604..9813689

Molecular Weight (calculated)

72346.1 Da

IEP (calculated)

7.666

GRAVY (calculated)

0.247

Length

663 amino acids

Sequence
(BLAST)

001: MKRQKGVVDE NIFDVLTEEI VFTILDFLDP NPLDKKSFSL ACKAFYGIES RHRKALKPLR SEHLITVLKR YPHLEHLDLS LCPRITDNSL TIISVLCKST
101: LRSIDLSQSR FFSHVGLWNL ATNCSGLVEI DLSNATELRD AGAAAIAEAK NLERLWLARC KLITDMGIGC IAVGCKKLRS ISLKWCLGVG DLGVGLIAVK
201: CKQIRHLDLS YLPITNKCLP CILQLQYLED LILVGCFSID DDSLVALKHG CKSLKKLDMS SCQNVSHVGL SSLTSDARSL QQLALAYGSP VTHALADSLQ
301: DLSMLQSIKL DGCAVTYAGL KGIGNSCALL REVSLSKCLG VTDEGLSSLV MKHRDLRKLD VTCCRKITQV SIAYITNSCP ALTSLKMESC TLVPSEAFVL
401: IGQRCLCLEE LDLTDNEIDD EGLKSISRCF KLTSLKLGIC LNITDEGLGH VGMCCSKLIE LDLYRCVGIT DSGILAIAHG CPGLEMINVA YCKDITDSSL
501: ISLSKCPRLN TFESRGCPSI TSLGLAAIAV GCKQLAKLDI KKCHNINDAG MIPLAHFSQN LRQINLSYSS VTDVGLLSLA SISCLQSMTI LHLKGLTASG
601: LAAALLACGG LTKVKLQASF KSLLPQPLFE HLEARGCMFQ WRDKVFQAEL DPICWKLQLE DRI

Best Arabidopsis Sequence Match ( AT5G01720.1 )
(BLAST)

001: MKKVKQIRVL KPFDLLSEEL VFIILDLISP NPSDLKSFSL TCKSFYQLES KHRGSLKPLR SDYLPRILTR YRNTTDLDLT FCPRVTDYAL SVVGCLSGPT
101: LRSLDLSRSG SFSAAGLLRL ALKCVNLVEI DLSNATEMRD ADAAVVAEAR SLERLKLGRC KMLTDMGIGC IAVGCKKLNT VSLKWCVGVG DLGVGLLAVK
201: CKDIRTLDLS YLPITGKCLH DILKLQHLEE LLLEGCFGVD DDSLKSLRHD CKSLKKLDAS SCQNLTHRGL TSLLSGAGYL QRLDLSHCSS VISLDFASSL
301: KKVSALQSIR LDGCSVTPDG LKAIGTLCNS LKEVSLSKCV SVTDEGLSSL VMKLKDLRKL DITCCRKLSR VSITQIANSC PLLVSLKMES CSLVSREAFW
401: LIGQKCRLLE ELDLTDNEID DEGLKSISSC LSLSSLKLGI CLNITDKGLS YIGMGCSNLR ELDLYRSVGI TDVGISTIAQ GCIHLETINI SYCQDITDKS
501: LVSLSKCSLL QTFESRGCPN ITSQGLAAIA VRCKRLAKVD LKKCPSINDA GLLALAHFSQ NLKQINVSDT AVTEVGLLSL ANIGCLQNIA VVNSSGLRPS
601: GVAAALLGCG GLRKAKLHAS LRSLLPLSLI HHLEARGCAF LWKDNTLQAE LDPKYWKQQL EEMAP

Arabidopsis Description

FBL3F-box/LRR-repeat protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWU5]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.