Factsheet for GSMUA_Achr10P29380_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 1
nucleus 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P22290_001	Banana	cytosol	83.19	82.96
VIT_08s0058g00700.t01	Wine grape	cytosol	58.82	63.35
PGSC0003DMT400030966	Potato	cytosol, plasma membrane, plastid	56.3	60.45
KRH76059	Soybean	cytosol, nucleus, peroxisome	56.58	60.21
Solyc10g076290.1.1	Tomato	cytosol	56.3	59.56
VIT_06s0004g07520.t01	Wine grape	cytosol	54.48	58.76
TraesCS5B01G149400.1	Wheat	mitochondrion	56.02	58.65
TraesCS5A01G150800.2	Wheat	mitochondrion	55.74	58.36
KRH65525	Soybean	cytosol, peroxisome, plastid	57.42	57.91
EES07863	Sorghum	nucleus	56.02	57.89
HORVU5Hr1G047420.2	Barley	cytosol, mitochondrion, plastid	54.62	57.78
KXG22793	Sorghum	nucleus	56.3	57.76
Zm00001d044622_P002	Maize	mitochondrion	56.72	57.53
Os12t0108500-01	Rice	cytosol, plasma membrane, plastid	55.6	56.96
TraesCS5D01G155900.1	Wheat	mitochondrion	54.9	56.57
AT5G01720.1	Thale cress	vacuole	51.96	55.79
Bra005669.1-P	Field mustard	cytosol	51.26	54.79
Zm00001d005072_P003	Maize	mitochondrion	55.6	54.76
KRH17127	Soybean	cytosol	49.86	54.6
CDX80753	Canola	endoplasmic reticulum	51.54	54.44
CDY11182	Canola	cytosol, endoplasmic reticulum, nucleus	51.54	54.44
Os11t0108932-01	Rice	nucleus	22.97	52.56
KRH72766	Soybean	cytosol	39.36	52.23
GSMUA_Achr11P...	Banana	cytosol	37.25	40.55
GSMUA_Achr6P20450_001	Banana	cytosol	36.55	39.55
GSMUA_Achr5P19410_001	Banana	cytosol	16.39	27.53
GSMUA_Achr8P13910_001	Banana	mitochondrion	13.59	27.4
GSMUA_Achr3P22880_001	Banana	cytosol	23.11	25.78
GSMUA_Achr2P17760_001	Banana	cytosol	12.32	24.86
GSMUA_Achr8P28940_001	Banana	cytosol	12.89	24.21
GSMUA_Achr10P...	Banana	cytosol	11.48	23.1
GSMUA_Achr8P15580_001	Banana	cytosol	13.17	23.04
GSMUA_Achr10P...	Banana	extracellular, plasma membrane, plastid	21.29	22.75
GSMUA_Achr2P05250_001	Banana	cytosol	15.41	22.63
GSMUA_Achr6P05220_001	Banana	cytosol	20.73	22.63
GSMUA_Achr3P28280_001	Banana	plastid	15.55	22.52
GSMUA_Achr4P12920_001	Banana	plastid	15.97	22.31
GSMUA_Achr4P30680_001	Banana	cytosol	19.75	21.63
GSMUA_Achr9P28510_001	Banana	cytosol, nucleus, peroxisome	19.61	21.41
GSMUA_Achr9P11380_001	Banana	cytosol	13.17	20.98
GSMUA_AchrUn_...	Banana	cytosol	10.78	20.92
GSMUA_Achr6P18620_001	Banana	cytosol	10.64	20.71
GSMUA_Achr2P15920_001	Banana	cytosol, peroxisome, plastid	18.91	20.21
GSMUA_Achr9P22570_001	Banana	plastid	12.04	19.55
GSMUA_Achr9P18840_001	Banana	plastid	16.11	15.75

Protein Annotations

EnsemblPlants:GSMUA_Achr10P29380_001	EnsemblPlants:GSMUA_Achr10T29380_001	EnsemblPlantsGene:GSMUA_Achr10G29380_001	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:F-box-like_dom_sf	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
InterPro:Leu-rich_rpt_Cys-con_subtyp	PANTHER:PTHR44309	PANTHER:PTHR44309:SF3	PFAM:PF13516	SEG:seg	SMART:SM00367
SUPFAM:SSF52047	SUPFAM:SSF81383	UniParc:UPI0002953BC7	UniProt:M0RMG2	MapMan:35.1	:

Description

F-box/LRR-repeat protein 3 [Source:GMGC_GENE;Acc:GSMUA_Achr10G29380_001]

Coordinates

chr10:+:31915079..31919094

Molecular Weight (calculated)

77292.1 Da

IEP (calculated)

7.747

GRAVY (calculated)

0.155

Length

714 amino acids

Sequence
(BLAST)

001: MAKSRDLCRR IDRSDGFATL TLDLFSGSPN PNPCSYSRSA KRVRVSCASP AAAAAEENRS NPFDSLSEEV LFLILDRLES DPLDKKSFSL VCRSFYAAES
101: RHRRALTPLR SGLLPAALAR YPSVSRLDLS LCPSVTDAAL ASVGGALRSS LRSIDLSRSR GFSYAGIESV AVNCAALVEI NLSNATDLSD AAAAAIGRAR
201: NLEKLWLARC KMVTDMGIGC IAVGCQKLRL LCLKWCLGIS DLGVGLVAVK CKQLRSLDLS FVPITEKCLP AVLQLPHLED LALVGCLSID DEGLMSVKQE
301: SKSLQVLDMS NCQHVNHAGF SSLLSKTPEL REISLAYYCK VTHSLASSLQ KLYNLQSIKL DGCEVTTSGL KTMANSCRSL GELSLSKCSG VTDEGLSFFV
401: TKHKGLVKLD VTCCRNITDL SLASITSSCT SLTNLSMESC ILVSREGFRL IGQHCHLLEE LDLTDNDLDD EGLRAISGCH NLSVLKIGIC LKISDEGLIH
501: VAKGCPNLQE LDLYRSVGIT DIGVMAIARG CPLLQIINLS YCTEVTDYSL RSLSKCSNLN TLEIRGCQVS SSGLAVVAVG CRKLTKLDIK KCYFVDDAGM
601: LLLARFSQNL RQINLSYCSV TDVGLLALAS VSCLQNMTIL HSGGLTSNGL AAVLVACGGL TKVKLHSSFK PLIPKPILEH VEARGCLFQW RDKPFQVELE
701: PSEVWKQQSQ EMHV

Best Arabidopsis Sequence Match ( AT5G01720.1 )
(BLAST)

001: MKKVKQIRVL KPFDLLSEEL VFIILDLISP NPSDLKSFSL TCKSFYQLES KHRGSLKPLR SDYLPRILTR YRNTTDLDLT FCPRVTDYAL SVVGCLSGPT
101: LRSLDLSRSG SFSAAGLLRL ALKCVNLVEI DLSNATEMRD ADAAVVAEAR SLERLKLGRC KMLTDMGIGC IAVGCKKLNT VSLKWCVGVG DLGVGLLAVK
201: CKDIRTLDLS YLPITGKCLH DILKLQHLEE LLLEGCFGVD DDSLKSLRHD CKSLKKLDAS SCQNLTHRGL TSLLSGAGYL QRLDLSHCSS VISLDFASSL
301: KKVSALQSIR LDGCSVTPDG LKAIGTLCNS LKEVSLSKCV SVTDEGLSSL VMKLKDLRKL DITCCRKLSR VSITQIANSC PLLVSLKMES CSLVSREAFW
401: LIGQKCRLLE ELDLTDNEID DEGLKSISSC LSLSSLKLGI CLNITDKGLS YIGMGCSNLR ELDLYRSVGI TDVGISTIAQ GCIHLETINI SYCQDITDKS
501: LVSLSKCSLL QTFESRGCPN ITSQGLAAIA VRCKRLAKVD LKKCPSINDA GLLALAHFSQ NLKQINVSDT AVTEVGLLSL ANIGCLQNIA VVNSSGLRPS
601: GVAAALLGCG GLRKAKLHAS LRSLLPLSLI HHLEARGCAF LWKDNTLQAE LDPKYWKQQL EEMAP

Arabidopsis Description

FBL3F-box/LRR-repeat protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWU5]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.