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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 3
  • cytosol 2
  • mitochondrion 1
PPI

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G25490.1 GSMUA_Achr10P... AT2G27050.1 14675533
AT2G25490.1 GSMUA_Achr11P... AT2G27050.1 14675533
AT2G25490.1 GSMUA_Achr2P11540_001 AT2G27050.1 14675533
AT2G25490.1 GSMUA_Achr3P09440_001 AT2G27050.1 14675533
AT2G25490.1 GSMUA_Achr5P27670_001 AT2G27050.1 14675533
AT2G25490.1 GSMUA_Achr6P15930_001 AT2G27050.1 14675533
AT2G25490.1 GSMUA_Achr8P21550_001 AT2G27050.1 14675533
AT2G25490.1 GSMUA_Achr9P17080_001 AT2G27050.1 14675533
AT2G25490.1 GSMUA_Achr10P... AT3G20770.1 14675532
AT2G25490.1 GSMUA_Achr11P... AT3G20770.1 14675532
AT2G25490.1 GSMUA_Achr2P11540_001 AT3G20770.1 14675532
AT2G25490.1 GSMUA_Achr3P09440_001 AT3G20770.1 14675532
AT2G25490.1 GSMUA_Achr5P27670_001 AT3G20770.1 14675532
AT2G25490.1 GSMUA_Achr6P15930_001 AT3G20770.1 14675532
AT2G25490.1 GSMUA_Achr8P21550_001 AT3G20770.1 14675532
AT2G25490.1 GSMUA_Achr9P17080_001 AT3G20770.1 14675532
AT2G25490.1 GSMUA_Achr10P... AT3G20770.1 14675533
AT2G25490.1 GSMUA_Achr11P... AT3G20770.1 14675533
AT2G25490.1 GSMUA_Achr2P11540_001 AT3G20770.1 14675533
AT2G25490.1 GSMUA_Achr3P09440_001 AT3G20770.1 14675533
AT2G25490.1 GSMUA_Achr5P27670_001 AT3G20770.1 14675533
AT2G25490.1 GSMUA_Achr6P15930_001 AT3G20770.1 14675533
AT2G25490.1 GSMUA_Achr8P21550_001 AT3G20770.1 14675533
AT2G25490.1 GSMUA_Achr9P17080_001 AT3G20770.1 14675533
AT2G25490.1 GSMUA_Achr1P11740_001 AT3G28715.1 21798944
AT2G25490.1 GSMUA_Achr6P35890_001 AT3G28715.1 21798944
AT2G25490.1 GSMUA_Achr9P17620_001 AT4G02570.1 14675533
AT5G25350.1 GSMUA_Achr10P... AT3G20770.1 14675532
AT5G25350.1 GSMUA_Achr11P... AT3G20770.1 14675532
AT5G25350.1 GSMUA_Achr2P11540_001 AT3G20770.1 14675532
AT5G25350.1 GSMUA_Achr3P09440_001 AT3G20770.1 14675532
AT5G25350.1 GSMUA_Achr5P27670_001 AT3G20770.1 14675532
AT5G25350.1 GSMUA_Achr6P15930_001 AT3G20770.1 14675532
AT5G25350.1 GSMUA_Achr8P21550_001 AT3G20770.1 14675532
AT5G25350.1 GSMUA_Achr9P17080_001 AT3G20770.1 14675532
AT5G25350.1 GSMUA_Achr10P... AT3G20770.1 14675533
AT5G25350.1 GSMUA_Achr11P... AT3G20770.1 14675533
AT5G25350.1 GSMUA_Achr2P11540_001 AT3G20770.1 14675533
AT5G25350.1 GSMUA_Achr3P09440_001 AT3G20770.1 14675533
AT5G25350.1 GSMUA_Achr5P27670_001 AT3G20770.1 14675533
AT5G25350.1 GSMUA_Achr6P15930_001 AT3G20770.1 14675533
AT5G25350.1 GSMUA_Achr8P21550_001 AT3G20770.1 14675533
AT5G25350.1 GSMUA_Achr9P17080_001 AT3G20770.1 14675533
AT5G25350.1 GSMUA_Achr9P17620_001 AT4G02570.1 14675533
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr4P30680_001 Banana cytosol 79.97 80.21
GSMUA_Achr9P28510_001 Banana cytosol, nucleus, peroxisome 79.66 79.66
GSMUA_Achr2P15920_001 Banana cytosol, peroxisome, plastid 75.84 74.25
GSMUA_Achr10P... Banana extracellular, plasma membrane, plastid 75.69 74.1
HORVU7Hr1G090240.1 Barley cytosol 46.33 56.22
VIT_11s0016g05410.t01 Wine grape cytosol 56.27 55.51
PGSC0003DMT400007545 Potato cytosol 53.67 55.1
Zm00001d015778_P001 Maize cytosol 54.13 55.05
Zm00001d053642_P001 Maize cytosol 54.28 54.53
KRH20255 Soybean cytosol 53.06 54.3
EES06473 Sorghum cytosol, peroxisome, plasma membrane 54.28 54.2
KRH03688 Soybean cytosol 52.91 54.15
HORVU1Hr1G089690.1 Barley cytosol, extracellular, mitochondrion 22.02 54.14
Solyc12g009560.1.1 Tomato cytosol 52.6 54.0
EER90022 Sorghum cytosol, plastid 51.07 53.35
TraesCS6A01G181900.1 Wheat cytosol 52.91 53.31
TraesCS6D01G169200.1 Wheat cytosol 52.91 53.31
TraesCS6B01G210700.1 Wheat cytosol 52.91 53.31
PGSC0003DMT400079445 Potato cytosol, nucleus, peroxisome 52.14 53.12
Solyc07g008250.2.1 Tomato cytosol, nucleus, peroxisome 51.99 53.04
VIT_04s0008g05470.t01 Wine grape cytosol 53.98 52.92
TraesCS7B01G278800.1 Wheat cytosol 52.29 52.86
HORVU6Hr1G038430.3 Barley plastid 52.45 52.53
TraesCS7A01G377500.1 Wheat cytosol 51.99 52.39
TraesCS7D01G373800.1 Wheat cytosol 51.99 52.23
KRH62989 Soybean cytosol 51.68 52.0
KRH52439 Soybean cytosol, nucleus, peroxisome 50.61 51.88
PGSC0003DMT400040977 Potato nucleus 53.06 51.87
KRH61771 Soybean cytosol 50.31 51.73
Solyc08g060810.2.1 Tomato plastid 52.6 51.73
Os06t0605900-01 Rice cytosol 49.54 51.67
Os02t0200900-01 Rice cytosol 51.83 51.36
KRH15886 Soybean cytosol 50.15 50.93
AT2G25490.1 Thale cress plastid 48.47 50.48
KRH05167 Soybean cytosol 46.94 50.33
CDX87090 Canola cytosol 47.09 50.0
AT5G25350.1 Thale cress cytosol 47.55 49.92
Bra036542.1-P Field mustard cytosol 46.48 49.35
CDY19807 Canola cytosol 46.33 49.19
CDX88173 Canola cytosol 46.33 48.71
Bra009835.1-P Field mustard cytosol 46.18 48.55
CDX80503 Canola cytosol 46.02 48.47
CDX76980 Canola cytosol 44.19 48.25
CDY35358 Canola cytosol 45.57 47.83
Bra034254.1-P Field mustard cytosol 45.41 47.75
PGSC0003DMT400089433 Potato mitochondrion 32.57 46.41
PGSC0003DMT400094835 Potato cytosol 16.82 44.9
HORVU5Hr1G029670.1 Barley mitochondrion 35.02 44.64
Zm00001d036880_P003 Maize cytosol 49.85 44.29
PGSC0003DMT400042949 Potato cytosol 37.31 44.2
KRH04870 Soybean cytosol 18.35 44.12
Solyc06g049010.1.1 Tomato plastid 41.74 44.03
Zm00001d000408_P001 Maize cytosol 49.39 43.47
HORVU5Hr1G000950.4 Barley plastid 29.66 43.4
Solyc06g030610.1.1 Tomato cytosol 17.13 40.88
Solyc06g030620.1.1 Tomato cytosol 12.39 40.3
GSMUA_Achr8P13910_001 Banana mitochondrion 14.07 25.99
GSMUA_Achr8P15580_001 Banana cytosol 15.9 25.49
GSMUA_Achr5P19410_001 Banana cytosol 16.21 24.94
GSMUA_Achr8P28940_001 Banana cytosol 13.76 23.68
GSMUA_Achr2P17760_001 Banana cytosol 12.69 23.45
GSMUA_Achr9P11380_001 Banana cytosol 16.05 23.44
GSMUA_AchrUn_... Banana cytosol 13.15 23.37
GSMUA_Achr6P18620_001 Banana cytosol 13.0 23.16
GSMUA_Achr10P... Banana cytosol 12.54 23.1
GSMUA_Achr3P28280_001 Banana plastid 16.67 22.11
GSMUA_Achr3P22880_001 Banana cytosol 21.41 21.88
GSMUA_Achr6P20450_001 Banana cytosol 21.56 21.36
GSMUA_Achr11P... Banana cytosol 21.41 21.34
GSMUA_Achr7P22290_001 Banana cytosol 23.09 21.09
GSMUA_Achr10P... Banana cytosol, nucleus, peroxisome 22.63 20.73
GSMUA_Achr2P05250_001 Banana cytosol 15.29 20.58
GSMUA_Achr9P22570_001 Banana plastid 13.61 20.23
GSMUA_Achr4P12920_001 Banana plastid 14.83 18.98
GSMUA_Achr9P18840_001 Banana plastid 15.44 13.84
Protein Annotations
MapMan:11.5.2.6MapMan:19.2.2.8.1.4.2Gene3D:3.80.10.10InterPro:F-box-like_dom_sfInterPro:F-box_domGO:GO:0003674
GO:GO:0005488GO:GO:0005515EnsemblPlantsGene:GSMUA_Achr6G05220_001EnsemblPlants:GSMUA_Achr6P05220_001EnsemblPlants:GSMUA_Achr6T05220_001InterPro:IPR001611
InterPro:IPR001810InterPro:IPR032675InterPro:LRR_dom_sfInterPro:Leu-rich_rptInterPro:Leu-rich_rpt_Cys-con_subtypUniProt:M0T4C0
PFAM:PF00646PFAM:PF13516PANTHER:PTHR44327PANTHER:PTHR44327:SF1SMART:SM00367SUPFAM:SSF52047
SUPFAM:SSF81383UniParc:UPI000295BD00SEG:seg:::
Description
Putative EIN3-binding F-box protein 1 [Source:GMGC_GENE;Acc:GSMUA_Achr6G05220_001]
Coordinates
chr6:+:3525834..3529222
Molecular Weight (calculated)
70180.5 Da
IEP (calculated)
7.857
GRAVY (calculated)
0.116
Length
654 amino acids
Sequence
(BLAST)
001: MAALVNCAGN DDIGPGGPLF SNLMDSSLLL SLTYNFDAYC PPSKRYRITS LICKAGEKTA DEKQQPRSID TLPDECLFEI LRRLPGDKER SNSACVSKRW
101: LMLLCSIRSS ELADRKKHRN ESVKKPLPDL NKDVSEDEQE SENNGFLTRR LDAEEATDIR LASIALGTCS RGGLGKLLIR GSNSTRVTDV GLSAIAHGCP
201: SLRALSMWKV PLITDAGLSE IADGCPLLEK LDLCQCPQIS DRGLIAVAQK CPKLTSLTIE SCSSVGNEGL QAIGRCCPKL KSVTIKNCLH VGDQGITSLV
301: SSASSSLERI KLQTLSISDV ALAVIGHCGK NIIDLSLSGL QNVYEKGFWV MGSTLGLRKL RSISITCCNG LTDIALQAIA KGSPFLKHLF VRKSCYLSDS
401: GLSAFAESAK ELENLHLEDC NQITLIGVLG ALSKCSPQLK SLSLVRCLGI KDTAFAPVQL PSCISLRSLT IRDCPGVSSA SLQVVGKICP QLQNIDLSGQ
501: VGVTDTFLLP LIKSSDVGFV QVNLNGCVNV TDDLVTTLVK AHGSTLKMLN LRGCKKITDR SLLAIADGCS VIEDLDLSSC SVSDYGVAVL ASARQLQLQI
601: LSLASCSKVT VKSLPFLGNL GQSMVGLNLQ HCSLISTRGM KLLEEKLWWC DIIS
Best Arabidopsis Sequence Match ( AT2G25490.1 )
(BLAST)
001: MSQIFSFAGE NDFYRRGAIY PNPKDASLLL SLGSFADVYF PPSKRSRVVA PTIFSAFEKK PVSIDVLPDE CLFEIFRRLS GPQERSACAF VSKQWLTLVS
101: SIRQKEIDVP SKITEDGDDC EGCLSRSLDG KKATDVRLAA IAVGTAGRGG LGKLSIRGSN SAKVSDLGLR SIGRSCPSLG SLSLWNVSTI TDNGLLEIAE
201: GCAQLEKLEL NRCSTITDKG LVAIAKSCPN LTELTLEACS RIGDEGLLAI ARSCSKLKSV SIKNCPLVRD QGIASLLSNT TCSLAKLKLQ MLNVTDVSLA
301: VVGHYGLSIT DLVLAGLSHV SEKGFWVMGN GVGLQKLNSL TITACQGVTD MGLESVGKGC PNMKKAIISK SPLLSDNGLV SFAKASLSLE SLQLEECHRV
401: TQFGFFGSLL NCGEKLKAFS LVNCLSIRDL TTGLPASSHC SALRSLSIRN CPGFGDANLA AIGKLCPQLE DIDLCGLKGI TESGFLHLIQ SSLVKINFSG
501: CSNLTDRVIS AITARNGWTL EVLNIDGCSN ITDASLVSIA ANCQILSDLD ISKCAISDSG IQALASSDKL KLQILSVAGC SMVTDKSLPA IVGLGSTLLG
601: LNLQQCRSIS NSTVDFLVER LYKCDILS
Arabidopsis Description
EBF1EIN3-binding F-box protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKK0]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.