Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
GSMUA_Achr4P30680_001 | Banana | cytosol | 79.97 | 80.21 |
GSMUA_Achr9P28510_001 | Banana | cytosol, nucleus, peroxisome | 79.66 | 79.66 |
GSMUA_Achr2P15920_001 | Banana | cytosol, peroxisome, plastid | 75.84 | 74.25 |
GSMUA_Achr10P... | Banana | extracellular, plasma membrane, plastid | 75.69 | 74.1 |
HORVU7Hr1G090240.1 | Barley | cytosol | 46.33 | 56.22 |
VIT_11s0016g05410.t01 | Wine grape | cytosol | 56.27 | 55.51 |
PGSC0003DMT400007545 | Potato | cytosol | 53.67 | 55.1 |
Zm00001d015778_P001 | Maize | cytosol | 54.13 | 55.05 |
Zm00001d053642_P001 | Maize | cytosol | 54.28 | 54.53 |
KRH20255 | Soybean | cytosol | 53.06 | 54.3 |
EES06473 | Sorghum | cytosol, peroxisome, plasma membrane | 54.28 | 54.2 |
KRH03688 | Soybean | cytosol | 52.91 | 54.15 |
HORVU1Hr1G089690.1 | Barley | cytosol, extracellular, mitochondrion | 22.02 | 54.14 |
Solyc12g009560.1.1 | Tomato | cytosol | 52.6 | 54.0 |
EER90022 | Sorghum | cytosol, plastid | 51.07 | 53.35 |
TraesCS6A01G181900.1 | Wheat | cytosol | 52.91 | 53.31 |
TraesCS6D01G169200.1 | Wheat | cytosol | 52.91 | 53.31 |
TraesCS6B01G210700.1 | Wheat | cytosol | 52.91 | 53.31 |
PGSC0003DMT400079445 | Potato | cytosol, nucleus, peroxisome | 52.14 | 53.12 |
Solyc07g008250.2.1 | Tomato | cytosol, nucleus, peroxisome | 51.99 | 53.04 |
VIT_04s0008g05470.t01 | Wine grape | cytosol | 53.98 | 52.92 |
TraesCS7B01G278800.1 | Wheat | cytosol | 52.29 | 52.86 |
HORVU6Hr1G038430.3 | Barley | plastid | 52.45 | 52.53 |
TraesCS7A01G377500.1 | Wheat | cytosol | 51.99 | 52.39 |
TraesCS7D01G373800.1 | Wheat | cytosol | 51.99 | 52.23 |
KRH62989 | Soybean | cytosol | 51.68 | 52.0 |
KRH52439 | Soybean | cytosol, nucleus, peroxisome | 50.61 | 51.88 |
PGSC0003DMT400040977 | Potato | nucleus | 53.06 | 51.87 |
KRH61771 | Soybean | cytosol | 50.31 | 51.73 |
Solyc08g060810.2.1 | Tomato | plastid | 52.6 | 51.73 |
Os06t0605900-01 | Rice | cytosol | 49.54 | 51.67 |
Os02t0200900-01 | Rice | cytosol | 51.83 | 51.36 |
KRH15886 | Soybean | cytosol | 50.15 | 50.93 |
AT2G25490.1 | Thale cress | plastid | 48.47 | 50.48 |
KRH05167 | Soybean | cytosol | 46.94 | 50.33 |
CDX87090 | Canola | cytosol | 47.09 | 50.0 |
AT5G25350.1 | Thale cress | cytosol | 47.55 | 49.92 |
Bra036542.1-P | Field mustard | cytosol | 46.48 | 49.35 |
CDY19807 | Canola | cytosol | 46.33 | 49.19 |
CDX88173 | Canola | cytosol | 46.33 | 48.71 |
Bra009835.1-P | Field mustard | cytosol | 46.18 | 48.55 |
CDX80503 | Canola | cytosol | 46.02 | 48.47 |
CDX76980 | Canola | cytosol | 44.19 | 48.25 |
CDY35358 | Canola | cytosol | 45.57 | 47.83 |
Bra034254.1-P | Field mustard | cytosol | 45.41 | 47.75 |
PGSC0003DMT400089433 | Potato | mitochondrion | 32.57 | 46.41 |
PGSC0003DMT400094835 | Potato | cytosol | 16.82 | 44.9 |
HORVU5Hr1G029670.1 | Barley | mitochondrion | 35.02 | 44.64 |
Zm00001d036880_P003 | Maize | cytosol | 49.85 | 44.29 |
PGSC0003DMT400042949 | Potato | cytosol | 37.31 | 44.2 |
KRH04870 | Soybean | cytosol | 18.35 | 44.12 |
Solyc06g049010.1.1 | Tomato | plastid | 41.74 | 44.03 |
Zm00001d000408_P001 | Maize | cytosol | 49.39 | 43.47 |
HORVU5Hr1G000950.4 | Barley | plastid | 29.66 | 43.4 |
Solyc06g030610.1.1 | Tomato | cytosol | 17.13 | 40.88 |
Solyc06g030620.1.1 | Tomato | cytosol | 12.39 | 40.3 |
GSMUA_Achr8P13910_001 | Banana | mitochondrion | 14.07 | 25.99 |
GSMUA_Achr8P15580_001 | Banana | cytosol | 15.9 | 25.49 |
GSMUA_Achr5P19410_001 | Banana | cytosol | 16.21 | 24.94 |
GSMUA_Achr8P28940_001 | Banana | cytosol | 13.76 | 23.68 |
GSMUA_Achr2P17760_001 | Banana | cytosol | 12.69 | 23.45 |
GSMUA_Achr9P11380_001 | Banana | cytosol | 16.05 | 23.44 |
GSMUA_AchrUn_... | Banana | cytosol | 13.15 | 23.37 |
GSMUA_Achr6P18620_001 | Banana | cytosol | 13.0 | 23.16 |
GSMUA_Achr10P... | Banana | cytosol | 12.54 | 23.1 |
GSMUA_Achr3P28280_001 | Banana | plastid | 16.67 | 22.11 |
GSMUA_Achr3P22880_001 | Banana | cytosol | 21.41 | 21.88 |
GSMUA_Achr6P20450_001 | Banana | cytosol | 21.56 | 21.36 |
GSMUA_Achr11P... | Banana | cytosol | 21.41 | 21.34 |
GSMUA_Achr7P22290_001 | Banana | cytosol | 23.09 | 21.09 |
GSMUA_Achr10P... | Banana | cytosol, nucleus, peroxisome | 22.63 | 20.73 |
GSMUA_Achr2P05250_001 | Banana | cytosol | 15.29 | 20.58 |
GSMUA_Achr9P22570_001 | Banana | plastid | 13.61 | 20.23 |
GSMUA_Achr4P12920_001 | Banana | plastid | 14.83 | 18.98 |
GSMUA_Achr9P18840_001 | Banana | plastid | 15.44 | 13.84 |
Protein Annotations
MapMan:11.5.2.6 | MapMan:19.2.2.8.1.4.2 | Gene3D:3.80.10.10 | InterPro:F-box-like_dom_sf | InterPro:F-box_dom | GO:GO:0003674 |
GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSMUA_Achr6G05220_001 | EnsemblPlants:GSMUA_Achr6P05220_001 | EnsemblPlants:GSMUA_Achr6T05220_001 | InterPro:IPR001611 |
InterPro:IPR001810 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_Cys-con_subtyp | UniProt:M0T4C0 |
PFAM:PF00646 | PFAM:PF13516 | PANTHER:PTHR44327 | PANTHER:PTHR44327:SF1 | SMART:SM00367 | SUPFAM:SSF52047 |
SUPFAM:SSF81383 | UniParc:UPI000295BD00 | SEG:seg | : | : | : |
Description
Putative EIN3-binding F-box protein 1 [Source:GMGC_GENE;Acc:GSMUA_Achr6G05220_001]
Coordinates
chr6:+:3525834..3529222
Molecular Weight (calculated)
70180.5 Da
IEP (calculated)
7.857
GRAVY (calculated)
0.116
Length
654 amino acids
Sequence
(BLAST)
(BLAST)
001: MAALVNCAGN DDIGPGGPLF SNLMDSSLLL SLTYNFDAYC PPSKRYRITS LICKAGEKTA DEKQQPRSID TLPDECLFEI LRRLPGDKER SNSACVSKRW
101: LMLLCSIRSS ELADRKKHRN ESVKKPLPDL NKDVSEDEQE SENNGFLTRR LDAEEATDIR LASIALGTCS RGGLGKLLIR GSNSTRVTDV GLSAIAHGCP
201: SLRALSMWKV PLITDAGLSE IADGCPLLEK LDLCQCPQIS DRGLIAVAQK CPKLTSLTIE SCSSVGNEGL QAIGRCCPKL KSVTIKNCLH VGDQGITSLV
301: SSASSSLERI KLQTLSISDV ALAVIGHCGK NIIDLSLSGL QNVYEKGFWV MGSTLGLRKL RSISITCCNG LTDIALQAIA KGSPFLKHLF VRKSCYLSDS
401: GLSAFAESAK ELENLHLEDC NQITLIGVLG ALSKCSPQLK SLSLVRCLGI KDTAFAPVQL PSCISLRSLT IRDCPGVSSA SLQVVGKICP QLQNIDLSGQ
501: VGVTDTFLLP LIKSSDVGFV QVNLNGCVNV TDDLVTTLVK AHGSTLKMLN LRGCKKITDR SLLAIADGCS VIEDLDLSSC SVSDYGVAVL ASARQLQLQI
601: LSLASCSKVT VKSLPFLGNL GQSMVGLNLQ HCSLISTRGM KLLEEKLWWC DIIS
101: LMLLCSIRSS ELADRKKHRN ESVKKPLPDL NKDVSEDEQE SENNGFLTRR LDAEEATDIR LASIALGTCS RGGLGKLLIR GSNSTRVTDV GLSAIAHGCP
201: SLRALSMWKV PLITDAGLSE IADGCPLLEK LDLCQCPQIS DRGLIAVAQK CPKLTSLTIE SCSSVGNEGL QAIGRCCPKL KSVTIKNCLH VGDQGITSLV
301: SSASSSLERI KLQTLSISDV ALAVIGHCGK NIIDLSLSGL QNVYEKGFWV MGSTLGLRKL RSISITCCNG LTDIALQAIA KGSPFLKHLF VRKSCYLSDS
401: GLSAFAESAK ELENLHLEDC NQITLIGVLG ALSKCSPQLK SLSLVRCLGI KDTAFAPVQL PSCISLRSLT IRDCPGVSSA SLQVVGKICP QLQNIDLSGQ
501: VGVTDTFLLP LIKSSDVGFV QVNLNGCVNV TDDLVTTLVK AHGSTLKMLN LRGCKKITDR SLLAIADGCS VIEDLDLSSC SVSDYGVAVL ASARQLQLQI
601: LSLASCSKVT VKSLPFLGNL GQSMVGLNLQ HCSLISTRGM KLLEEKLWWC DIIS
001: MSQIFSFAGE NDFYRRGAIY PNPKDASLLL SLGSFADVYF PPSKRSRVVA PTIFSAFEKK PVSIDVLPDE CLFEIFRRLS GPQERSACAF VSKQWLTLVS
101: SIRQKEIDVP SKITEDGDDC EGCLSRSLDG KKATDVRLAA IAVGTAGRGG LGKLSIRGSN SAKVSDLGLR SIGRSCPSLG SLSLWNVSTI TDNGLLEIAE
201: GCAQLEKLEL NRCSTITDKG LVAIAKSCPN LTELTLEACS RIGDEGLLAI ARSCSKLKSV SIKNCPLVRD QGIASLLSNT TCSLAKLKLQ MLNVTDVSLA
301: VVGHYGLSIT DLVLAGLSHV SEKGFWVMGN GVGLQKLNSL TITACQGVTD MGLESVGKGC PNMKKAIISK SPLLSDNGLV SFAKASLSLE SLQLEECHRV
401: TQFGFFGSLL NCGEKLKAFS LVNCLSIRDL TTGLPASSHC SALRSLSIRN CPGFGDANLA AIGKLCPQLE DIDLCGLKGI TESGFLHLIQ SSLVKINFSG
501: CSNLTDRVIS AITARNGWTL EVLNIDGCSN ITDASLVSIA ANCQILSDLD ISKCAISDSG IQALASSDKL KLQILSVAGC SMVTDKSLPA IVGLGSTLLG
601: LNLQQCRSIS NSTVDFLVER LYKCDILS
101: SIRQKEIDVP SKITEDGDDC EGCLSRSLDG KKATDVRLAA IAVGTAGRGG LGKLSIRGSN SAKVSDLGLR SIGRSCPSLG SLSLWNVSTI TDNGLLEIAE
201: GCAQLEKLEL NRCSTITDKG LVAIAKSCPN LTELTLEACS RIGDEGLLAI ARSCSKLKSV SIKNCPLVRD QGIASLLSNT TCSLAKLKLQ MLNVTDVSLA
301: VVGHYGLSIT DLVLAGLSHV SEKGFWVMGN GVGLQKLNSL TITACQGVTD MGLESVGKGC PNMKKAIISK SPLLSDNGLV SFAKASLSLE SLQLEECHRV
401: TQFGFFGSLL NCGEKLKAFS LVNCLSIRDL TTGLPASSHC SALRSLSIRN CPGFGDANLA AIGKLCPQLE DIDLCGLKGI TESGFLHLIQ SSLVKINFSG
501: CSNLTDRVIS AITARNGWTL EVLNIDGCSN ITDASLVSIA ANCQILSDLD ISKCAISDSG IQALASSDKL KLQILSVAGC SMVTDKSLPA IVGLGSTLLG
601: LNLQQCRSIS NSTVDFLVER LYKCDILS
Arabidopsis Description
EBF1EIN3-binding F-box protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKK0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.