Factsheet for GSMUA_Achr9P17080_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr2P15920_001
GSMUA_Achr4P30680_001
GSMUA_Achr6P05220_001
GSMUA_Achr9P28510_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G27050.1	GSMUA_Achr10P...	AT2G25490.1	14675533
AT2G27050.1	GSMUA_Achr2P15920_001	AT2G25490.1	14675533
AT2G27050.1	GSMUA_Achr4P30680_001	AT2G25490.1	14675533
AT2G27050.1	GSMUA_Achr6P05220_001	AT2G25490.1	14675533
AT2G27050.1	GSMUA_Achr9P28510_001	AT2G25490.1	14675533
AT2G27050.1	GSMUA_Achr10P...	AT5G25350.1	14675533
AT2G27050.1	GSMUA_Achr2P15920_001	AT5G25350.1	14675533
AT2G27050.1	GSMUA_Achr4P30680_001	AT5G25350.1	14675533
AT2G27050.1	GSMUA_Achr6P05220_001	AT5G25350.1	14675533
AT2G27050.1	GSMUA_Achr9P28510_001	AT5G25350.1	14675533
AT3G20770.1	GSMUA_Achr10P...	AT2G25490.1	14675532
AT3G20770.1	GSMUA_Achr2P15920_001	AT2G25490.1	14675532
AT3G20770.1	GSMUA_Achr4P30680_001	AT2G25490.1	14675532
AT3G20770.1	GSMUA_Achr6P05220_001	AT2G25490.1	14675532
AT3G20770.1	GSMUA_Achr9P28510_001	AT2G25490.1	14675532
AT3G20770.1	GSMUA_Achr10P...	AT2G25490.1	14675533
AT3G20770.1	GSMUA_Achr2P15920_001	AT2G25490.1	14675533
AT3G20770.1	GSMUA_Achr4P30680_001	AT2G25490.1	14675533
AT3G20770.1	GSMUA_Achr6P05220_001	AT2G25490.1	14675533
AT3G20770.1	GSMUA_Achr9P28510_001	AT2G25490.1	14675533
AT3G20770.1	GSMUA_Achr10P...	AT5G25350.1	14675532
AT3G20770.1	GSMUA_Achr2P15920_001	AT5G25350.1	14675532
AT3G20770.1	GSMUA_Achr4P30680_001	AT5G25350.1	14675532
AT3G20770.1	GSMUA_Achr6P05220_001	AT5G25350.1	14675532
AT3G20770.1	GSMUA_Achr9P28510_001	AT5G25350.1	14675532
AT3G20770.1	GSMUA_Achr10P...	AT5G25350.1	14675533
AT3G20770.1	GSMUA_Achr2P15920_001	AT5G25350.1	14675533
AT3G20770.1	GSMUA_Achr4P30680_001	AT5G25350.1	14675533
AT3G20770.1	GSMUA_Achr6P05220_001	AT5G25350.1	14675533
AT3G20770.1	GSMUA_Achr9P28510_001	AT5G25350.1	14675533

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P15930_001	Banana	nucleus	60.13	72.2
GSMUA_Achr10P...	Banana	nucleus	60.29	71.84
GSMUA_Achr8P21550_001	Banana	nucleus	70.74	69.4
GSMUA_Achr3P09440_001	Banana	nucleus	58.52	68.81
GSMUA_Achr2P11540_001	Banana	nucleus	63.02	64.9
GSMUA_Achr5P27670_001	Banana	nucleus	63.18	62.68
GSMUA_Achr11P...	Banana	nucleus	56.11	58.95
TraesCS4A01G129400.1	Wheat	nucleus	51.13	58.14
Os03t0324300-02	Rice	nucleus	56.59	54.91
Os03t0324200-01	Rice	nucleus	56.43	54.5
HORVU4Hr1G051680.1	Barley	nucleus	56.75	54.22
TraesCS4B01G175100.1	Wheat	nucleus	56.43	54.0
EER94933	Sorghum	nucleus	55.79	53.97
TraesCS4D01G177000.1	Wheat	nucleus	56.43	53.92
Zm00001d028974_P001	Maize	nucleus	55.63	53.48
Zm00001d047563_P001	Maize	nucleus	54.98	53.27
CDX82228	Canola	nucleus	44.05	50.65
Os07t0685700-01	Rice	mitochondrion, nucleus	47.91	50.25
VIT_13s0047g00250.t01	Wine grape	nucleus	49.52	50.0
KRH18695	Soybean	nucleus	49.84	49.92
KRH14682	Soybean	nucleus	48.87	49.84
CDY27563	Canola	nucleus	46.78	49.57
CDY32390	Canola	nucleus	43.73	49.54
KRG89856	Soybean	nucleus	49.2	49.04
KRH73465	Soybean	nucleus	48.39	49.02
OQU90496	Sorghum	nucleus	46.78	48.99
Zm00001d022530_P001	Maize	nucleus	35.69	48.9
Bra001802.1-P	Field mustard	nucleus	45.5	48.71
AT2G27050.1	Thale cress	nucleus	45.66	48.63
Bra000528.1-P	Field mustard	nucleus	44.53	48.51
CDY38540	Canola	nucleus	43.89	48.49
CDX83250	Canola	nucleus	44.21	48.25
Zm00001d007188_P001	Maize	nucleus	45.98	48.07
KRH18696	Soybean	nucleus	46.95	47.25
AT3G20770.1	Thale cress	nucleus	46.78	46.34
TraesCS2B01G116900.1	Wheat	nucleus	45.66	45.88
TraesCS2D01G099400.1	Wheat	nucleus	45.66	45.81
TraesCS2A01G099900.1	Wheat	nucleus	45.5	45.79
Solyc01g096810.2.1	Tomato	nucleus	44.21	45.76
PGSC0003DMT400070751	Potato	nucleus	43.25	44.98
GSMUA_Achr10P...	Banana	nucleus	24.12	44.51
CDY19606	Canola	nucleus	29.9	40.43
CDY06379	Canola	nucleus	31.51	40.25
CDY60391	Canola	nucleus	27.01	39.53
Bra023927.1-P	Field mustard	nucleus	28.14	39.5
Bra035746.1-P	Field mustard	nucleus	30.55	38.78
GSMUA_AchrUn_...	Banana	nucleus	24.92	35.71
GSMUA_Achr7P21630_001	Banana	nucleus	36.82	34.96
GSMUA_Achr3P11160_001	Banana	nucleus	31.03	33.8
GSMUA_Achr9P27680_001	Banana	nucleus	32.8	33.44
GSMUA_Achr6P23310_001	Banana	nucleus	29.26	33.03
GSMUA_Achr8P17130_001	Banana	nucleus	28.78	32.72
GSMUA_Achr8P25580_001	Banana	nucleus	31.99	32.31

Protein Annotations

Gene3D:1.10.3180.10	MapMan:11.5.2.4	MapMan:15.5.11	ncoils:Coil	InterPro:Ethylene_insens-like_DNA-bd	GO:GO:0003674
GO:GO:0003700	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr9G17080_001
EnsemblPlants:GSMUA_Achr9P17080_001	EnsemblPlants:GSMUA_Achr9T17080_001	InterPro:IPR023278	UniProt:M0U115	PFAM:PF04873	PANTHER:PTHR33305
PANTHER:PTHR33305:SF1	SUPFAM:SSF116768	UniParc:UPI000295B3CF	SEG:seg	:	:

Description

Putative ETHYLENE INSENSITIVE 3-like 1 protein [Source:GMGC_GENE;Acc:GSMUA_Achr9G17080_001]

Coordinates

chr9:-:11613918..11616137

Molecular Weight (calculated)

70350.1 Da

IEP (calculated)

6.371

GRAVY (calculated)

-0.761

Length

622 amino acids

Sequence
(BLAST)

001: MMGGLLMEGM VYPGEPNYVQ NISYGSLHQP LVGECNGQGH LIDPPQDNFA EVCDEESDDE DVDIEELEHR LWRDRMRLKH LKEQQQQQSR SKSKNKEQGD
101: SAKQRQCHDQ ALRKKMSRAQ DGILKYMLKM MEVCNAQGFV YGIIPEKGKP VSGASDNLRG WWKEKVRFDR NGPVAIAKYQ VDNAIVGSNS EMSSGTASLH
201: SLQELQDTTL GSLLSALMQH CDPPQRRFPL EKGVAPPWWP TGKEEWWPQL GIPNDQRPPP YKKPHDLKKA WKVSVLTCVI KHMSPDINKI RRLVRQSKCL
301: QDKMTAKESA TWLAVIKQEE DMYMKLHPEA YFPPSSGSCI SGSISFVSSC SEYDAEGVDE GKCEDVVNHK LHAEGNPFDL SGTARKEKTV KEEMNMEFTR
401: KRNVAEPESV LNQCIYTCDN VQCPHHDPRH GFLDRNARNS HRYVCKYQGT GVAFNSFPVK ENKLLSFSMS YDTQPNPTSL ESGPIPANTS DLGIPSDGQR
501: SIDELMSLYD KNLNANKSFN SRGIGMSEGR TPLQPRTRVE DNFFPQGTKA IGGMLEEVSN LVQQQQQFPV RENVMPFQQQ FGNPSDEMSG DLCYGSAFSM
601: PSMDYSDALH RLQKAEAANW FY

Best Arabidopsis Sequence Match ( AT1G73730.1 )
(BLAST)

001: MGDLAMSVAD IRMENEPDDL ASDNVAEIDV SDEEIDADDL ERRMWKDRVR LKRIKERQKA GSQGAQTKET PKKISDQAQR KKMSRAQDGI LKYMLKLMEV
101: CKVRGFVYGI IPEKGKPVSG SSDNIRAWWK EKVKFDKNGP AAIAKYEEEC LAFGKSDGNR NSQFVLQDLQ DATLGSLLSS LMQHCDPPQR KYPLEKGTPP
201: PWWPTGNEEW WVKLGLPKSQ SPPYRKPHDL KKMWKVGVLT AVINHMLPDI AKIKRHVRQS KCLQDKMTAK ESAIWLAVLN QEESLIQQPS SDNGNSNVTE
301: THRRGNNADR RKPVVNSDSD YDVDGTEEAS GSVSSKDSRR NQIQKEQPTA ISHSVRDQDK AEKHRRRKRP RIRSGTVNRQ EEEQPEAQQR NILPDMNHVD
401: APLLEYNING THQEDDVVDP NIALGPEDNG LELVVPEFNN NYTYLPLVNE QTMMPVDERP MLYGPNPNQE LQFGSGYNFY NPSAVFVHNQ EDDILHTQIE
501: MNTQAPPHNS GFEEAPGGVL QPLGLLGNED GVTGSELPQY QSGILSPLTD LDFDYGGFGD DFSWFGA

Arabidopsis Description

EIL3SLIM1 [Source:UniProtKB/TrEMBL;Acc:A0A178VZZ3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.