Factsheet for Bra001802.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra009835.1-P
Bra034254.1-P
Bra036542.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G20770.1	Bra034254.1-P	AT2G25490.1	14675532
AT3G20770.1	Bra034254.1-P	AT2G25490.1	14675533
AT3G20770.1	Bra009835.1-P	AT5G25350.1	14675532
AT3G20770.1	Bra036542.1-P	AT5G25350.1	14675532
AT3G20770.1	Bra009835.1-P	AT5G25350.1	14675533
AT3G20770.1	Bra036542.1-P	AT5G25350.1	14675533

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX82228	Canola	nucleus	91.91	98.71
CDY32390	Canola	nucleus	89.5	94.72
AT3G20770.1	Thale cress	nucleus	88.47	81.85
Bra035746.1-P	Field mustard	nucleus	68.33	81.02
Bra023927.1-P	Field mustard	nucleus	59.72	78.33
Bra000528.1-P	Field mustard	nucleus	67.13	68.3
KRG89856	Soybean	nucleus	65.92	61.38
KRH18695	Soybean	nucleus	64.89	60.71
KRH14682	Soybean	nucleus	62.99	60.0
PGSC0003DMT400022477	Potato	nucleus	62.99	59.61
KRH73465	Soybean	nucleus	62.99	59.61
Solyc01g009170.2.1	Tomato	nucleus	62.31	58.96
KRH18696	Soybean	nucleus	62.31	58.58
Solyc06g073720.1.1	Tomato	nucleus	60.93	58.03
PGSC0003DMT400015148	Potato	nucleus	60.07	57.21
Solyc06g073730.1.1	Tomato	nucleus	59.38	57.02
VIT_06s0009g01380.t01	Wine grape	nucleus	59.21	56.39
PGSC0003DMT400015145	Potato	nucleus	58.0	56.26
GSMUA_Achr6P15930_001	Banana	nucleus	47.5	53.28
GSMUA_Achr10P...	Banana	nucleus	46.47	51.72
TraesCS4A01G129400.1	Wheat	nucleus	45.27	48.08
GSMUA_Achr2P11540_001	Banana	nucleus	49.23	47.35
GSMUA_Achr3P09440_001	Banana	nucleus	42.86	47.07
GSMUA_Achr5P27670_001	Banana	nucleus	49.4	45.77
EER94933	Sorghum	nucleus	50.43	45.57
GSMUA_Achr9P17080_001	Banana	nucleus	48.71	45.5
Zm00001d047563_P001	Maize	nucleus	50.26	45.48
Zm00001d028974_P001	Maize	nucleus	50.26	45.13
GSMUA_Achr8P21550_001	Banana	nucleus	49.23	45.11
TraesCS4B01G175100.1	Wheat	nucleus	50.26	44.92
TraesCS4D01G177000.1	Wheat	nucleus	50.09	44.7
GSMUA_Achr11P...	Banana	nucleus	45.44	44.59
HORVU4Hr1G051680.1	Barley	nucleus	49.91	44.55
Zm00001d022530_P001	Maize	nucleus	34.77	44.49
Zm00001d007188_P001	Maize	nucleus	44.92	43.87
Bra014281.1-P	Field mustard	nucleus	12.56	43.45
OQU90496	Sorghum	nucleus	43.03	42.09
TraesCS2D01G099400.1	Wheat	nucleus	43.2	40.48
TraesCS2A01G099900.1	Wheat	nucleus	43.03	40.45
TraesCS2B01G116900.1	Wheat	nucleus	42.34	39.74
Os02t0689132-00	Rice	nucleus	11.88	38.98
Bra008110.1-P	Field mustard	nucleus	36.14	38.96
Bra028601.1-P	Field mustard	nucleus	30.29	38.68
Bra002358.1-P	Field mustard	nucleus	33.39	38.04
Bra015970.1-P	Field mustard	nucleus	36.32	35.95
Bra003831.1-P	Field mustard	nucleus	33.91	35.69
Bra020146.1-P	Field mustard	nucleus	20.83	31.19
Bra006050.1-P	Field mustard	nucleus	16.35	28.88
Bra024354.1-P	Field mustard	nucleus	15.66	25.63

Protein Annotations

Gene3D:1.10.3180.10	MapMan:11.5.2.4	MapMan:15.5.11	EnsemblPlantsGene:Bra001802	EnsemblPlants:Bra001802.1	EnsemblPlants:Bra001802.1-P
ncoils:Coil	InterPro:Ethylene_insens-like_DNA-bd	GO:GO:0003674	GO:GO:0003700	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR023278	UniProt:M4CC72	PFAM:PF04873	PANTHER:PTHR33305
PANTHER:PTHR33305:SF1	SUPFAM:SSF116768	UniParc:UPI00025405D5	SEG:seg	:	:

Description

AT3G20770 (E=4e-149) EIN3 | EIN3 (ETHYLENE-INSENSITIVE3); transcription factor

Coordinates

chrA03:-:18567827..18569572

Molecular Weight (calculated)

65880.9 Da

IEP (calculated)

5.339

GRAVY (calculated)

-0.698

Length

581 amino acids

Sequence
(BLAST)

001: MMFNEMGLLG GNMDFFGELD FCPPPQPEPV TEDDYTDEEI DVDELERRMW RDKMRLKRLK EHKDKSREGG VDAAKQRQSS QEQARRKKMS RAQDGILKYM
101: LKMMEVCKAQ GFVYGIIPEN GKPVTGASDN LREWWKDKVR FDRNGPAAIS KYQAENSVQG VCEGSGLIGS TPHTLQELQD TTLGSLLSAL MQHCDPPQRR
201: FPLEKGVPPP WWPNGEEEWW CQLGLPKDQG PAPYKKPHDL KKAWKVGVLT AVIKHMFPDV AKIRKLVRQS KCLQDKMTAK ESATWLAIVN QEESLARELY
301: PESCPPSLSG GSCSLLMNDC SQYDVEGVEK ESPYEVEELK PVKEEVPSEF FRKRKPSRDL NTIMVDRAAF TCENPGCVHG DISRGFLDRN SRDNHQLVCP
401: HRDSCLQSRF HVSEVKPVVG YSQPRQPVNS VAQPIDLTGI GVPEDGQKMI SELMSMYDRN VHSNQTSMVM ENQSVSLLQP TVQNHQEHLQ FQGNVVESSF
501: FEDLNIPNRA NNSNQTFFQG SNSNSFEAAV NNGSSNRFQL VYDAPPFDMA SFDYRDDMSM AGVVGTMDGM QQKQQDVSIW F

Best Arabidopsis Sequence Match ( AT3G20770.1 )
(BLAST)

001: MMFNEMGMCG NMDFFSSGSL GEVDFCPVPQ AEPDSIVEDD YTDDEIDVDE LERRMWRDKM RLKRLKEQDK GKEGVDAAKQ RQSQEQARRK KMSRAQDGIL
101: KYMLKMMEVC KAQGFVYGII PENGKPVTGA SDNLREWWKD KVRFDRNGPA AITKYQAENN IPGIHEGNNP IGPTPHTLQE LQDTTLGSLL SALMQHCDPP
201: QRRFPLEKGV PPPWWPNGKE DWWPQLGLPK DQGPAPYKKP HDLKKAWKVG VLTAVIKHMF PDIAKIRKLV RQSKCLQDKM TAKESATWLA IINQEESLAR
301: ELYPESCPPL SLSGGSCSLL MNDCSQYDVE GFEKESHYEV EELKPEKVMN SSNFGMVAKM HDFPVKEEVP AGNSEFMRKR KPNRDLNTIM DRTVFTCENL
401: GCAHSEISRG FLDRNSRDNH QLACPHRDSR LPYGAAPSRF HVNEVKPVVG FPQPRPVNSV AQPIDLTGIV PEDGQKMISE LMSMYDRNVQ SNQTSMVMEN
501: QSVSLLQPTV HNHQEHLQFP GNMVEGSFFE DLNIPNRANN NNSSNNQTFF QGNNNNNNVF KFDTADHNNF EAAHNNNNNS SGNRFQLVFD STPFDMASFD
601: YRDDMSMPGV VGTMDGMQQK QQDVSIWF

Arabidopsis Description

EIN3Protein ETHYLENE INSENSITIVE 3 [Source:UniProtKB/Swiss-Prot;Acc:O24606]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.