CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
EER90022
EES06473

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G27050.1	EER90022	AT2G25490.1	14675533
AT2G27050.1	EES06473	AT2G25490.1	14675533
AT2G27050.1	EER90022	AT5G25350.1	14675533
AT2G27050.1	EES06473	AT5G25350.1	14675533
AT3G20770.1	EER90022	AT2G25490.1	14675532
AT3G20770.1	EES06473	AT2G25490.1	14675532
AT3G20770.1	EER90022	AT2G25490.1	14675533
AT3G20770.1	EES06473	AT2G25490.1	14675533
AT3G20770.1	EER90022	AT5G25350.1	14675532
AT3G20770.1	EES06473	AT5G25350.1	14675532
AT3G20770.1	EER90022	AT5G25350.1	14675533
AT3G20770.1	EES06473	AT5G25350.1	14675533

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d028974_P001	Maize	nucleus	94.09	93.51
Zm00001d047563_P001	Maize	nucleus	92.38	92.52
TraesCS4A01G129400.1	Wheat	nucleus	72.78	85.56
Os03t0324300-02	Rice	nucleus	83.98	84.24
Os03t0324200-01	Rice	nucleus	83.67	83.54
TraesCS4D01G177000.1	Wheat	nucleus	83.2	82.18
TraesCS4B01G175100.1	Wheat	nucleus	83.05	82.15
HORVU4Hr1G051680.1	Barley	nucleus	82.74	81.72
GSMUA_Achr6P15930_001	Banana	nucleus	54.59	67.76
GSMUA_Achr10P...	Banana	nucleus	53.81	66.28
GSMUA_Achr5P27670_001	Banana	nucleus	57.23	58.69
GSMUA_Achr2P11540_001	Banana	nucleus	54.59	58.11
GSMUA_Achr3P09440_001	Banana	nucleus	46.97	57.09
GSMUA_Achr8P21550_001	Banana	nucleus	55.21	55.99
GSMUA_Achr9P17080_001	Banana	nucleus	53.97	55.79
GSMUA_Achr11P...	Banana	nucleus	50.86	55.24
OQU90496	Sorghum	nucleus	50.7	54.88
CDX82228	Canola	nucleus	44.01	52.31
CDY32390	Canola	nucleus	44.32	51.91
VIT_13s0047g00250.t01	Wine grape	nucleus	49.61	51.79
Bra001802.1-P	Field mustard	nucleus	45.57	50.43
KRH14682	Soybean	nucleus	47.74	50.33
CDY38540	Canola	nucleus	43.86	50.09
KRH18695	Soybean	nucleus	48.21	49.92
CDX83250	Canola	nucleus	44.01	49.65
KRG89856	Soybean	nucleus	48.06	49.52
KRH73465	Soybean	nucleus	47.28	49.51
Bra000528.1-P	Field mustard	nucleus	43.86	49.39
CDY27563	Canola	nucleus	44.95	49.23
AT2G27050.1	Thale cress	nucleus	44.63	49.14
KRH18696	Soybean	nucleus	46.5	48.38
AT3G20770.1	Thale cress	nucleus	46.66	47.77
Solyc01g096810.2.1	Tomato	nucleus	44.48	47.59
PGSC0003DMT400070751	Potato	nucleus	43.7	46.99
CDY19606	Canola	nucleus	29.86	41.74
CDY06379	Canola	nucleus	31.1	41.07
Bra035746.1-P	Field mustard	nucleus	31.1	40.82
CDY60391	Canola	nucleus	26.91	40.71
Bra023927.1-P	Field mustard	nucleus	26.91	39.05
EER99089	Sorghum	nucleus	34.37	36.29
OQU80929	Sorghum	nucleus	34.84	36.25
EES05301	Sorghum	nucleus	24.26	32.64
KXG26452	Sorghum	nucleus	22.39	30.64
EES02452	Sorghum	nucleus	8.71	17.39
OQU88707	Sorghum	nucleus, plastid	12.29	15.46

Protein Annotations

Gene3D:1.10.3180.10	MapMan:11.5.2.4	MapMan:15.5.11	EntrezGene:8083691	UniProt:C5X1R5	ncoils:Coil
EnsemblPlants:EER94933	ProteinID:EER94933	ProteinID:EER94933.1	InterPro:Ethylene_insens-like_DNA-bd	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:IPR023278	PFAM:PF04873	PANTHER:PTHR33305	PANTHER:PTHR33305:SF11	EnsemblPlantsGene:SORBI_3001G387600
SUPFAM:SSF116768	unigene:Sbi.6317	UniParc:UPI0001A82E64	RefSeq:XP_002467935.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr1:-:67472693..67476803

Molecular Weight (calculated)

71830.4 Da

IEP (calculated)

4.783

GRAVY (calculated)

-0.738

Length

643 amino acids

Sequence
(BLAST)

001: MMGGGLMMDQ SVVFPGVHNF VDLLQQNGDK NLGFGSLMPQ TSSGDQCVMG EGDLVDPPPE SFPDAGEDDS DDDVEDIEEL ERRMWRDRMK LKRLRELQQS
101: RGKDSIAGGG GLADGSSKPR QSQEQARRKK MSRAQDGILK YMLKMMEVCR AQGFVYGIIP EKGKPVSGAS DNLRAWWKEK VRFDRNGPAA IAKYQADNAV
201: PGAENELTSG AASPHSLQEL QDTTLGSLLS ALMQHCDPPQ RRYPLEKGVP PPWWPTGDEE WWPELGIPKD QGPPPYKKPH DLKKAWKVSV LTAVIKHMSP
301: DIEKIRRLVR QSKCLQDKMT AKEISTWLAV VKQEEELYLK LHPGALPPAS TGGIASAISF NTSSSEYDVD IIDECKGDEA GNQKTGVTDP TAFNLGAAIL
401: SDKFLVQTPM KEETADVEFI QKRNAPAAAE PELMLNNRVY TCNNVQCPHS DYSYGFLDRN TRNSHQYTCK YNEPIPQSTE NKPPPAPPQS QAFQPAFNQP
501: NQSLNNLDFS LPMDGQRSIA ELMNMYDNNF MTNKNMSSDS VTIMERPNAM PQRIQMDEGF FGQGNGVFDD VNSMMQQQQQ APVQQQQQQQ QQQFFIRDDT
601: PFVSQMGDIT STSEFRFGSG FNMSSTVDYP GAAQKNDGTN WFY

Best Arabidopsis Sequence Match ( AT3G20770.1 )
(BLAST)

001: MMFNEMGMCG NMDFFSSGSL GEVDFCPVPQ AEPDSIVEDD YTDDEIDVDE LERRMWRDKM RLKRLKEQDK GKEGVDAAKQ RQSQEQARRK KMSRAQDGIL
101: KYMLKMMEVC KAQGFVYGII PENGKPVTGA SDNLREWWKD KVRFDRNGPA AITKYQAENN IPGIHEGNNP IGPTPHTLQE LQDTTLGSLL SALMQHCDPP
201: QRRFPLEKGV PPPWWPNGKE DWWPQLGLPK DQGPAPYKKP HDLKKAWKVG VLTAVIKHMF PDIAKIRKLV RQSKCLQDKM TAKESATWLA IINQEESLAR
301: ELYPESCPPL SLSGGSCSLL MNDCSQYDVE GFEKESHYEV EELKPEKVMN SSNFGMVAKM HDFPVKEEVP AGNSEFMRKR KPNRDLNTIM DRTVFTCENL
401: GCAHSEISRG FLDRNSRDNH QLACPHRDSR LPYGAAPSRF HVNEVKPVVG FPQPRPVNSV AQPIDLTGIV PEDGQKMISE LMSMYDRNVQ SNQTSMVMEN
501: QSVSLLQPTV HNHQEHLQFP GNMVEGSFFE DLNIPNRANN NNSSNNQTFF QGNNNNNNVF KFDTADHNNF EAAHNNNNNS SGNRFQLVFD STPFDMASFD
601: YRDDMSMPGV VGTMDGMQQK QQDVSIWF

Arabidopsis Description

EIN3Protein ETHYLENE INSENSITIVE 3 [Source:UniProtKB/Swiss-Prot;Acc:O24606]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.