CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d020939_P001	Maize	nucleus	93.6	93.6
HORVU5Hr1G073380.1	Barley	nucleus	77.34	77.34
TraesCS5D01G273600.1	Wheat	nucleus	77.5	77.12
Os09t0490200-01	Rice	nucleus	76.85	76.6
TraesCS5B01G265400.1	Wheat	nucleus	72.91	76.29
TraesCS5A01G265700.1	Wheat	nucleus	72.74	75.99
OQU80929	Sorghum	nucleus	56.65	55.83
GSMUA_Achr9P27680_001	Banana	nucleus	55.17	55.08
GSMUA_Achr8P25580_001	Banana	nucleus	53.69	53.08
GSMUA_Achr3P11160_001	Banana	nucleus	48.77	52.01
Bra008110.1-P	Field mustard	nucleus	38.59	43.6
AT1G73730.1	Thale cress	nucleus	40.23	43.21
CDY60137	Canola	nucleus	41.38	42.93
CDX73009	Canola	nucleus	41.22	42.91
Bra015970.1-P	Field mustard	nucleus	41.22	42.76
VIT_06s0004g01610.t01	Wine grape	nucleus	43.19	42.22
KRH10163	Soybean	nucleus	40.89	42.2
KRH23176	Soybean	nucleus	40.89	42.13
Bra003831.1-P	Field mustard	nucleus	37.44	41.3
CDY11093	Canola	nucleus	38.1	41.06
CDY47740	Canola	nucleus	39.08	40.89
Solyc01g014480.2.1	Tomato	nucleus	40.07	36.15
PGSC0003DMT400055102	Potato	nucleus	39.41	35.93
PGSC0003DMT400076890	Potato	nucleus	39.9	35.89
Solyc01g006650.1.1	Tomato	nucleus	38.75	35.76
OQU90496	Sorghum	nucleus	33.83	34.68
EER94933	Sorghum	nucleus	36.29	34.37
EES05301	Sorghum	nucleus	24.47	31.17
KXG26452	Sorghum	nucleus	22.33	28.94
OQU88707	Sorghum	nucleus, plastid	12.64	15.07
EES02452	Sorghum	nucleus	7.55	14.29

Protein Annotations

Gene3D:1.10.3180.10	MapMan:11.5.2.4	MapMan:15.5.11	EntrezGene:8064849	UniProt:C5X3X3	ncoils:Coil
EnsemblPlants:EER99089	ProteinID:EER99089	ProteinID:EER99089.1	InterPro:Ethylene_insens-like_DNA-bd	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:IPR023278	ProteinID:KXG35911.1	ProteinID:OQU89692.1	PFAM:PF04873	PANTHER:PTHR33305
PANTHER:PTHR33305:SF2	EnsemblPlantsGene:SORBI_3002G247500	SUPFAM:SSF116768	unigene:Sbi.4357	UniParc:UPI0001A84286	RefSeq:XP_002462568.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:63544987..63550471

Molecular Weight (calculated)

68176.5 Da

IEP (calculated)

6.184

GRAVY (calculated)

-0.749

Length

609 amino acids

Sequence
(BLAST)

001: MDQLAMLATE LGDSSDFEVE GIQNLTENDV SDEEIEPEDL ARRMWKDRVR LRRIKERQQK LALQQAELEK LRPKPISDQA MRKKMSRAHD GILKYMLKLM
101: QVCNARGFVY GIIPDKGKPV SGASDNIRAW WKEKVKFDKN GPAAIEKYDS ENLVTANAQS GGSKNPHSLM DLQDATLGSL LSSLMQHCDP PQRKYPLEKG
201: VPPPWWPSGK EEWWIALGLP SGQIPPYKKP HDLKKVWKAG VLTGVIKHMS PNFDKIRNHV RKSKCLQDKM TAKESLIWLG VLQREESLVH RIDNGVSEIT
301: PRSMPEDRNG DTNSSSNEYD VYGFEDAPVS TSSKDDEQDL SPVTQSAVEH VPKRGRERAY NKHPNQIVPG KAKEPPKRKK ARRSSTVTEP DARRVVDAPE
401: NSRNLIPDMN RLDQVEIQGR SNQIVIFDHG DTTTEALQHR GDAQVQVHLP GAEVNNFNSA PTANPTPISI CMGDQPLPYQ NNDSTRSRSE NSFPVDAHPG
501: LNNLPSSYQN LPPKQSLPLS MMDHHVVPMG IRAPTDSIPY GDHILGGGSS TSVPGDMQQL IDFPFYGDQD KFVGSSFEGL PLDYISISSP IPDIDDLLHD
601: DDLMEYLGT

Best Arabidopsis Sequence Match ( AT1G73730.1 )
(BLAST)

001: MGDLAMSVAD IRMENEPDDL ASDNVAEIDV SDEEIDADDL ERRMWKDRVR LKRIKERQKA GSQGAQTKET PKKISDQAQR KKMSRAQDGI LKYMLKLMEV
101: CKVRGFVYGI IPEKGKPVSG SSDNIRAWWK EKVKFDKNGP AAIAKYEEEC LAFGKSDGNR NSQFVLQDLQ DATLGSLLSS LMQHCDPPQR KYPLEKGTPP
201: PWWPTGNEEW WVKLGLPKSQ SPPYRKPHDL KKMWKVGVLT AVINHMLPDI AKIKRHVRQS KCLQDKMTAK ESAIWLAVLN QEESLIQQPS SDNGNSNVTE
301: THRRGNNADR RKPVVNSDSD YDVDGTEEAS GSVSSKDSRR NQIQKEQPTA ISHSVRDQDK AEKHRRRKRP RIRSGTVNRQ EEEQPEAQQR NILPDMNHVD
401: APLLEYNING THQEDDVVDP NIALGPEDNG LELVVPEFNN NYTYLPLVNE QTMMPVDERP MLYGPNPNQE LQFGSGYNFY NPSAVFVHNQ EDDILHTQIE
501: MNTQAPPHNS GFEEAPGGVL QPLGLLGNED GVTGSELPQY QSGILSPLTD LDFDYGGFGD DFSWFGA

Arabidopsis Description

EIL3SLIM1 [Source:UniProtKB/TrEMBL;Acc:A0A178VZZ3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.