Factsheet for Bra015970.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra030812.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G73730.1	Bra030812.1-P	AT1G56160.1	18218967

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY60137	Canola	nucleus	99.49	99.49
AT1G73730.1	Thale cress	nucleus	83.3	86.24
Bra008110.1-P	Field mustard	nucleus	78.36	85.34
Bra003831.1-P	Field mustard	nucleus	79.05	84.06
HORVU0Hr1G011440.1	Barley	nucleus	45.66	69.25
VIT_06s0004g01610.t01	Wine grape	nucleus	56.22	52.97
KRH23176	Soybean	nucleus	53.32	52.96
KRH10163	Soybean	nucleus	52.81	52.54
Solyc01g014480.2.1	Tomato	nucleus	51.28	44.59
PGSC0003DMT400076890	Potato	nucleus	51.28	44.46
Solyc01g006650.1.1	Tomato	nucleus	48.21	42.88
PGSC0003DMT400055102	Potato	nucleus	48.72	42.81
GSMUA_Achr9P27680_001	Banana	nucleus	44.12	42.46
Os09t0490200-01	Rice	nucleus	43.95	42.23
TraesCS5D01G273600.1	Wheat	nucleus	43.95	42.16
Zm00001d020939_P001	Maize	nucleus	43.27	41.71
GSMUA_Achr8P25580_001	Banana	nucleus	43.61	41.56
GSMUA_Achr3P11160_001	Banana	nucleus	40.2	41.33
EER99089	Sorghum	nucleus	42.76	41.22
TraesCS5A01G265700.1	Wheat	nucleus	40.37	40.65
TraesCS5B01G265400.1	Wheat	nucleus	40.2	40.55
OQU80929	Sorghum	nucleus	40.72	38.67
TraesCS7A01G246100.1	Wheat	nucleus	40.2	38.44
TraesCS7D01G244600.1	Wheat	nucleus	40.2	38.44
TraesCS7B01G145400.1	Wheat	nucleus	40.03	38.34
Os08t0508700-01	Rice	nucleus	40.2	38.13
Zm00001d031445_P001	Maize	nucleus	39.86	37.03
Bra000528.1-P	Field mustard	nucleus	35.78	36.78
Bra001802.1-P	Field mustard	nucleus	35.95	36.32
Bra028601.1-P	Field mustard	nucleus	25.72	33.19
Bra014281.1-P	Field mustard	nucleus	9.03	31.55
Bra002358.1-P	Field mustard	nucleus	26.41	30.39
Bra006050.1-P	Field mustard	nucleus	14.82	26.44
Bra023927.1-P	Field mustard	nucleus	18.74	24.83
Bra035746.1-P	Field mustard	nucleus	19.93	23.88
Bra020146.1-P	Field mustard	nucleus	15.33	23.2
Bra024354.1-P	Field mustard	nucleus	12.44	20.56

Protein Annotations

Gene3D:1.10.3180.10	MapMan:11.5.2.4	MapMan:15.5.11	EnsemblPlantsGene:Bra015970	EnsemblPlants:Bra015970.1	EnsemblPlants:Bra015970.1-P
ncoils:Coil	InterPro:Ethylene_insens-like_DNA-bd	GO:GO:0003674	GO:GO:0003700	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR023278	UniProt:M4DHJ3	PFAM:PF04873	PANTHER:PTHR33305
PANTHER:PTHR33305:SF21	SUPFAM:SSF116768	UniParc:UPI0002541D96	:	:	:

Description

AT1G73730 (E=2e-280) EIL3, SLIM1 | EIL3 (ETHYLENE-INSENSITIVE3-LIKE3); DNA binding / transcription factor

Coordinates

chrA07:-:20009342..20011351

Molecular Weight (calculated)

65977.9 Da

IEP (calculated)

4.957

GRAVY (calculated)

-0.861

Length

587 amino acids

Sequence
(BLAST)

001: MGGGDLAISV ADIRMENEQP DDLASDNVAE IDVSDEEIDA EDLERRMWKD RVRLKRIKER QKGDSQGAQA TKEGPPKKIS DQAQRKKMSR AQDGILKYML
101: KLMEVCKVRG FVYGIIPEKG KPVSGSSDNI RAWWKEKVKF DKNGPAAIAK YEEECLAFGK SDGNRNSQFV LQDLQDATLG SLLSSLMQHC DPPQRKYPLE
201: KGTPPPWWPT GKEEWWVKLG LPQSQSPPYR KPHDLKKMWK VGVLTAVINH MSPDIAKIKR HVRQSKCLQD KMTAKESAIW LAVLNQEESL IQQPSSDNGT
301: SNVTETHRRG NNADRRKTVV NSDSDYDVDG TEEASGSVSS KDSRRNQVPA ATSQQPVRDQ DKAEKHKRRK RPRIRSGTVN VQDEQQPEAE ERNVIPDMNH
401: VEAPMLDYNI NGATHHLEEG VLEPNISLGP EENGLELVVP EFDTNYTYLP PVDGQAMMPV DERPMLYGAN PNQELQFGSG YNYYNPSAVF VHNQEEDLIH
501: TQIEINSQAP PHSNGFDAQG GVLQPHGNEE VGVAGRDMPP QFQSDQDKLL DSNILSPFND LPFDSSTFYS GFDTFGAFDD DYSWFGA

Best Arabidopsis Sequence Match ( AT1G73730.1 )
(BLAST)

001: MGDLAMSVAD IRMENEPDDL ASDNVAEIDV SDEEIDADDL ERRMWKDRVR LKRIKERQKA GSQGAQTKET PKKISDQAQR KKMSRAQDGI LKYMLKLMEV
101: CKVRGFVYGI IPEKGKPVSG SSDNIRAWWK EKVKFDKNGP AAIAKYEEEC LAFGKSDGNR NSQFVLQDLQ DATLGSLLSS LMQHCDPPQR KYPLEKGTPP
201: PWWPTGNEEW WVKLGLPKSQ SPPYRKPHDL KKMWKVGVLT AVINHMLPDI AKIKRHVRQS KCLQDKMTAK ESAIWLAVLN QEESLIQQPS SDNGNSNVTE
301: THRRGNNADR RKPVVNSDSD YDVDGTEEAS GSVSSKDSRR NQIQKEQPTA ISHSVRDQDK AEKHRRRKRP RIRSGTVNRQ EEEQPEAQQR NILPDMNHVD
401: APLLEYNING THQEDDVVDP NIALGPEDNG LELVVPEFNN NYTYLPLVNE QTMMPVDERP MLYGPNPNQE LQFGSGYNFY NPSAVFVHNQ EDDILHTQIE
501: MNTQAPPHNS GFEEAPGGVL QPLGLLGNED GVTGSELPQY QSGILSPLTD LDFDYGGFGD DFSWFGA

Arabidopsis Description

EIL3SLIM1 [Source:UniProtKB/TrEMBL;Acc:A0A178VZZ3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.