Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G265700.1 | Wheat | nucleus | 93.79 | 98.46 |
| TraesCS5B01G265400.1 | Wheat | nucleus | 92.16 | 96.91 |
| HORVU5Hr1G073380.1 | Barley | nucleus | 94.61 | 95.07 |
| Os09t0490200-01 | Rice | nucleus | 78.1 | 78.23 |
| EER99089 | Sorghum | nucleus | 77.12 | 77.5 |
| Zm00001d020939_P001 | Maize | nucleus | 76.14 | 76.52 |
| TraesCS7D01G244600.1 | Wheat | nucleus | 61.11 | 60.91 |
| GSMUA_Achr9P27680_001 | Banana | nucleus | 53.76 | 53.93 |
| GSMUA_Achr8P25580_001 | Banana | nucleus | 53.27 | 52.92 |
| GSMUA_Achr3P11160_001 | Banana | nucleus | 49.02 | 52.54 |
| Bra008110.1-P | Field mustard | nucleus | 39.38 | 44.71 |
| AT1G73730.1 | Thale cress | nucleus | 41.34 | 44.62 |
| CDX73009 | Canola | nucleus | 42.32 | 44.27 |
| CDY60137 | Canola | nucleus | 42.32 | 44.12 |
| Bra015970.1-P | Field mustard | nucleus | 42.16 | 43.95 |
| VIT_06s0004g01610.t01 | Wine grape | nucleus | 43.95 | 43.18 |
| KRH10163 | Soybean | nucleus | 41.34 | 42.88 |
| KRH23176 | Soybean | nucleus | 41.34 | 42.81 |
| Bra003831.1-P | Field mustard | nucleus | 38.07 | 42.21 |
| CDY11093 | Canola | nucleus | 38.89 | 42.12 |
| CDY47740 | Canola | nucleus | 39.87 | 41.92 |
| Solyc01g006650.1.1 | Tomato | nucleus | 39.38 | 36.52 |
| PGSC0003DMT400055102 | Potato | nucleus | 39.54 | 36.23 |
| Solyc01g014480.2.1 | Tomato | nucleus | 39.87 | 36.15 |
| PGSC0003DMT400076890 | Potato | nucleus | 39.71 | 35.89 |
| TraesCS4D01G177000.1 | Wheat | nucleus | 35.46 | 33.33 |
| TraesCS3D01G390000.1 | Wheat | nucleus | 24.51 | 32.75 |
| TraesCS6D01G326600.1 | Wheat | nucleus | 23.86 | 31.88 |
| TraesCS2D01G099400.1 | Wheat | nucleus | 32.19 | 31.77 |
| TraesCS2D01G320800.1 | Wheat | nucleus | 23.37 | 30.75 |
Protein Annotations
| Gene3D:1.10.3180.10 | MapMan:11.5.2.4 | MapMan:15.5.11 | ncoils:Coil | InterPro:Ethylene_insens-like_DNA-bd | GO:GO:0003674 |
| GO:GO:0003700 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR023278 | PFAM:PF04873 |
| PANTHER:PTHR33305 | PANTHER:PTHR33305:SF2 | SUPFAM:SSF116768 | EnsemblPlantsGene:TraesCS5D01G273600 | EnsemblPlants:TraesCS5D01G273600.1 | SEG:seg |
Description
No Description!
Coordinates
chr5D:-:376662611..376664449
Molecular Weight (calculated)
68389.6 Da
IEP (calculated)
6.293
GRAVY (calculated)
-0.691
Length
612 amino acids
Sequence
(BLAST)
(BLAST)
001: MDQLALLATE FGDSSDFEVD GINENDVSDE EIEPEELARR MWKDRVRLRR IKERQQRLAL QQAELELEKS KPKQISDQAM RKKMARAHDG ILKYMLKLME
101: VCNARGFVYG IIPEKGKPVS GASDNIRAWW KEKVKFDKNG PAAIAKYEAE HLVDADAQSS VVKNEHSLMD LQDATLGSLL SSLMQHCNPP QRKYPLEKGT
201: PPPWWPAGNE EWWAALGLPR GQIAPYKKPH DLKKVWKVGV LTCVIKHMSP NFDKIRNHVR KSKILQDKMT AKESLIWLGV LQREERLVHG IDNGVSEITH
301: RSAPEDRNGT RNAHSSSNEY DVDGFEEAPL SISSKDDEQG LSPAAQSSEE HVSRRDRERA NTKHLYQAVV LKEGTKKQPP KRKRARHSSV AVEQEVQRTD
401: DAPENPGNLI PDMNRLDQVE IPGMANHQIT SFNQMAVTSE ALQHRGNAQG HVYLPGSGVN GFDNAQPVDA TPVSIYQPVL YGSSDNARSK SGSPFPLHAN
501: SGFNSFPSNY QTLPPKQSVP LPMMDHHVVP MGIRAPADNS PYGDHVIGGG SSTSVPGDMQ HLVDFPFYGE QDKFVGSSFE GLPLDYISMS SPIPDIDDLL
601: LHDDDLMEYL GT
101: VCNARGFVYG IIPEKGKPVS GASDNIRAWW KEKVKFDKNG PAAIAKYEAE HLVDADAQSS VVKNEHSLMD LQDATLGSLL SSLMQHCNPP QRKYPLEKGT
201: PPPWWPAGNE EWWAALGLPR GQIAPYKKPH DLKKVWKVGV LTCVIKHMSP NFDKIRNHVR KSKILQDKMT AKESLIWLGV LQREERLVHG IDNGVSEITH
301: RSAPEDRNGT RNAHSSSNEY DVDGFEEAPL SISSKDDEQG LSPAAQSSEE HVSRRDRERA NTKHLYQAVV LKEGTKKQPP KRKRARHSSV AVEQEVQRTD
401: DAPENPGNLI PDMNRLDQVE IPGMANHQIT SFNQMAVTSE ALQHRGNAQG HVYLPGSGVN GFDNAQPVDA TPVSIYQPVL YGSSDNARSK SGSPFPLHAN
501: SGFNSFPSNY QTLPPKQSVP LPMMDHHVVP MGIRAPADNS PYGDHVIGGG SSTSVPGDMQ HLVDFPFYGE QDKFVGSSFE GLPLDYISMS SPIPDIDDLL
601: LHDDDLMEYL GT
001: MGDLAMSVAD IRMENEPDDL ASDNVAEIDV SDEEIDADDL ERRMWKDRVR LKRIKERQKA GSQGAQTKET PKKISDQAQR KKMSRAQDGI LKYMLKLMEV
101: CKVRGFVYGI IPEKGKPVSG SSDNIRAWWK EKVKFDKNGP AAIAKYEEEC LAFGKSDGNR NSQFVLQDLQ DATLGSLLSS LMQHCDPPQR KYPLEKGTPP
201: PWWPTGNEEW WVKLGLPKSQ SPPYRKPHDL KKMWKVGVLT AVINHMLPDI AKIKRHVRQS KCLQDKMTAK ESAIWLAVLN QEESLIQQPS SDNGNSNVTE
301: THRRGNNADR RKPVVNSDSD YDVDGTEEAS GSVSSKDSRR NQIQKEQPTA ISHSVRDQDK AEKHRRRKRP RIRSGTVNRQ EEEQPEAQQR NILPDMNHVD
401: APLLEYNING THQEDDVVDP NIALGPEDNG LELVVPEFNN NYTYLPLVNE QTMMPVDERP MLYGPNPNQE LQFGSGYNFY NPSAVFVHNQ EDDILHTQIE
501: MNTQAPPHNS GFEEAPGGVL QPLGLLGNED GVTGSELPQY QSGILSPLTD LDFDYGGFGD DFSWFGA
101: CKVRGFVYGI IPEKGKPVSG SSDNIRAWWK EKVKFDKNGP AAIAKYEEEC LAFGKSDGNR NSQFVLQDLQ DATLGSLLSS LMQHCDPPQR KYPLEKGTPP
201: PWWPTGNEEW WVKLGLPKSQ SPPYRKPHDL KKMWKVGVLT AVINHMLPDI AKIKRHVRQS KCLQDKMTAK ESAIWLAVLN QEESLIQQPS SDNGNSNVTE
301: THRRGNNADR RKPVVNSDSD YDVDGTEEAS GSVSSKDSRR NQIQKEQPTA ISHSVRDQDK AEKHRRRKRP RIRSGTVNRQ EEEQPEAQQR NILPDMNHVD
401: APLLEYNING THQEDDVVDP NIALGPEDNG LELVVPEFNN NYTYLPLVNE QTMMPVDERP MLYGPNPNQE LQFGSGYNFY NPSAVFVHNQ EDDILHTQIE
501: MNTQAPPHNS GFEEAPGGVL QPLGLLGNED GVTGSELPQY QSGILSPLTD LDFDYGGFGD DFSWFGA
Arabidopsis Description
EIL3SLIM1 [Source:UniProtKB/TrEMBL;Acc:A0A178VZZ3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.