Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G265400.1 | Wheat | nucleus | 96.23 | 96.39 |
| TraesCS5D01G273600.1 | Wheat | nucleus | 98.46 | 93.79 |
| HORVU5Hr1G073380.1 | Barley | nucleus | 93.65 | 89.66 |
| Os09t0490200-01 | Rice | nucleus | 77.02 | 73.49 |
| EER99089 | Sorghum | nucleus | 75.99 | 72.74 |
| Zm00001d020939_P001 | Maize | nucleus | 75.3 | 72.09 |
| TraesCS7A01G246100.1 | Wheat | nucleus | 58.83 | 55.86 |
| GSMUA_Achr9P27680_001 | Banana | nucleus | 51.97 | 49.67 |
| GSMUA_Achr8P25580_001 | Banana | nucleus | 51.97 | 49.19 |
| GSMUA_Achr3P11160_001 | Banana | nucleus | 47.51 | 48.51 |
| AT1G73730.1 | Thale cress | nucleus | 39.97 | 41.09 |
| Bra008110.1-P | Field mustard | nucleus | 37.91 | 41.0 |
| CDX73009 | Canola | nucleus | 40.82 | 40.68 |
| CDY60137 | Canola | nucleus | 40.82 | 40.55 |
| Bra015970.1-P | Field mustard | nucleus | 40.65 | 40.37 |
| Bra003831.1-P | Field mustard | nucleus | 37.91 | 40.04 |
| VIT_06s0004g01610.t01 | Wine grape | nucleus | 42.37 | 39.65 |
| CDY11093 | Canola | nucleus | 38.25 | 39.47 |
| KRH10163 | Soybean | nucleus | 39.11 | 38.64 |
| KRH23176 | Soybean | nucleus | 39.11 | 38.58 |
| CDY47740 | Canola | nucleus | 38.42 | 38.49 |
| TraesCS4A01G129400.1 | Wheat | nucleus | 32.08 | 34.19 |
| Solyc01g006650.1.1 | Tomato | nucleus | 37.39 | 33.03 |
| PGSC0003DMT400055102 | Potato | nucleus | 37.56 | 32.78 |
| Solyc01g014480.2.1 | Tomato | nucleus | 37.91 | 32.74 |
| PGSC0003DMT400076890 | Potato | nucleus | 37.74 | 32.5 |
| TraesCS3A01G396000.1 | Wheat | nucleus | 23.16 | 29.87 |
| TraesCS2A01G099900.1 | Wheat | nucleus | 29.5 | 27.83 |
| TraesCS2A01G342500.1 | Wheat | nucleus | 21.96 | 27.47 |
Protein Annotations
| Gene3D:1.10.3180.10 | MapMan:11.5.2.4 | MapMan:15.5.11 | ncoils:Coil | InterPro:Ethylene_insens-like_DNA-bd | GO:GO:0003674 |
| GO:GO:0003700 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR023278 | PFAM:PF04873 |
| PANTHER:PTHR33305 | PANTHER:PTHR33305:SF2 | SUPFAM:SSF116768 | EnsemblPlantsGene:TraesCS5A01G265700 | EnsemblPlants:TraesCS5A01G265700.1 | SEG:seg |
Description
No Description!
Coordinates
chr5A:-:477435606..477437444
Molecular Weight (calculated)
64860.2 Da
IEP (calculated)
5.311
GRAVY (calculated)
-0.682
Length
583 amino acids
Sequence
(BLAST)
(BLAST)
001: MDQLALLATE FGDSSDFEVD GINENDVSDE EIEPEELARR MWKDRVRLRR IKERQQKLAL QQAELELEKS KPKQISDQAM RKKMARAHDG ILKYMLKLME
101: VCNARGFVYG IIPEKGKPVS GASDNIRAWW KEKVKFDKNG PAAIAKYEAE HLVDADAQSS VVKTEHSLMD LQDATLGSLL SSLMQHCNPP QRKYPLEKGT
201: PTPWWPAGNE EWWAALGLPR GQIAPYKKPH DLKKVWKDKM TAKESLIWLG VLQREERLVL GIDNGVSEIT HRSAPEDRNG TRNAQSSSNE YDVDGFEEAP
301: LSISSKDDEQ GLSPAAQSSE EHVSGRDRER ANTKHLYQAV VLKEGTKKQP PKRKRARHSS VAVEQEVQRT DDAPENPGNL IPDMNRLDQV EIPGMANHQI
401: TSFNQMAVTS EALQHSGNAQ GHVYLPGSGV NGFDNAQPVD ATPVSIYQPV LYGSSDNARS KSGNPFPLHA NSGFNSFPSN YQTLPPKQSV PLPMMDHHVV
501: PMGIRAPADN SPYGDHVIGG GISTSVPGDM QHLVDFPFYG EQDKFVGSSF EGLPLDYISM SSPIPDIDDL LLHDDDLMEY LGT
101: VCNARGFVYG IIPEKGKPVS GASDNIRAWW KEKVKFDKNG PAAIAKYEAE HLVDADAQSS VVKTEHSLMD LQDATLGSLL SSLMQHCNPP QRKYPLEKGT
201: PTPWWPAGNE EWWAALGLPR GQIAPYKKPH DLKKVWKDKM TAKESLIWLG VLQREERLVL GIDNGVSEIT HRSAPEDRNG TRNAQSSSNE YDVDGFEEAP
301: LSISSKDDEQ GLSPAAQSSE EHVSGRDRER ANTKHLYQAV VLKEGTKKQP PKRKRARHSS VAVEQEVQRT DDAPENPGNL IPDMNRLDQV EIPGMANHQI
401: TSFNQMAVTS EALQHSGNAQ GHVYLPGSGV NGFDNAQPVD ATPVSIYQPV LYGSSDNARS KSGNPFPLHA NSGFNSFPSN YQTLPPKQSV PLPMMDHHVV
501: PMGIRAPADN SPYGDHVIGG GISTSVPGDM QHLVDFPFYG EQDKFVGSSF EGLPLDYISM SSPIPDIDDL LLHDDDLMEY LGT
001: MENEPDDLAS DNVAEIDVSD EEIDADDLER RMWKDRVRLK RIKERQKAGS QGAQTKETPK KISDQAQRKK MSRAQDGILK YMLKLMEVCK VRGFVYGIIP
101: EKGKPVSGSS DNIRAWWKEK VKFDKNGPAA IAKYEEECLA FGKSDGNRNS QFVLQDLQDA TLGSLLSSLM QHCDPPQRKY PLEKGTPPPW WPTGNEEWWV
201: KLGLPKSQSP PYRKPHDLKK MWKVGVLTAV INHMLPDIAK IKRHVRQSKC LQDKMTAKES AIWLAVLNQE ESLIQQPSSD NGNSNVTETH RRGNNADRRK
301: PVVNSDSDYD VDGTEEASGS VSSKDSRRNQ IQKEQPTAIS HSVRDQDKAE KHRRRKRPRI RSGTVNRQEE EQPEAQQRNI LPDMNHVDAP LLEYNINGTH
401: QEDDVVDPNI ALGPEDNGLE LVVPEFNNNY TYLPLVNEQT MMPVDERPML YGPNPNQELQ FGSGYNFYNP SAVFVHNQED DILHTQIEMN TQAPPHNSGF
501: EEAPGGVLQP LGLLGNEDGV TGSELPQYQS GILSPLTDLD FDYGGFGDDF SWFGA
101: EKGKPVSGSS DNIRAWWKEK VKFDKNGPAA IAKYEEECLA FGKSDGNRNS QFVLQDLQDA TLGSLLSSLM QHCDPPQRKY PLEKGTPPPW WPTGNEEWWV
201: KLGLPKSQSP PYRKPHDLKK MWKVGVLTAV INHMLPDIAK IKRHVRQSKC LQDKMTAKES AIWLAVLNQE ESLIQQPSSD NGNSNVTETH RRGNNADRRK
301: PVVNSDSDYD VDGTEEASGS VSSKDSRRNQ IQKEQPTAIS HSVRDQDKAE KHRRRKRPRI RSGTVNRQEE EQPEAQQRNI LPDMNHVDAP LLEYNINGTH
401: QEDDVVDPNI ALGPEDNGLE LVVPEFNNNY TYLPLVNEQT MMPVDERPML YGPNPNQELQ FGSGYNFYNP SAVFVHNQED DILHTQIEMN TQAPPHNSGF
501: EEAPGGVLQP LGLLGNEDGV TGSELPQYQS GILSPLTDLD FDYGGFGDDF SWFGA
Arabidopsis Description
EIL3SLIM1 [Source:UniProtKB/TrEMBL;Acc:A0A178VZZ3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.