CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH13720
KRH43737

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G73730.1	KRH13720	AT1G56160.1	18218967
AT1G73730.1	KRH43737	AT1G56160.1	18218967

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH23176	Soybean	nucleus	94.07	93.91
HORVU0Hr1G011440.1	Barley	nucleus	52.88	80.62
VIT_06s0004g01610.t01	Wine grape	nucleus	65.25	61.8
AT1G73730.1	Thale cress	nucleus	51.69	53.79
Bra008110.1-P	Field mustard	nucleus	48.47	53.06
Bra015970.1-P	Field mustard	nucleus	52.54	52.81
CDY60137	Canola	nucleus	52.54	52.81
CDX73009	Canola	nucleus	52.03	52.48
CDY11093	Canola	nucleus	48.47	50.62
Bra003831.1-P	Field mustard	nucleus	47.29	50.54
CDY47740	Canola	nucleus	48.64	49.31
PGSC0003DMT400055102	Potato	nucleus	55.59	49.1
Solyc01g014480.2.1	Tomato	nucleus	55.59	48.59
Solyc01g006650.1.1	Tomato	nucleus	54.24	48.48
PGSC0003DMT400076890	Potato	nucleus	55.25	48.15
GSMUA_Achr8P25580_001	Banana	nucleus	44.58	42.69
GSMUA_Achr9P27680_001	Banana	nucleus	44.07	42.62
KRH31276	Soybean	nucleus	28.47	42.21
GSMUA_Achr3P11160_001	Banana	nucleus	40.85	42.21
Os09t0490200-01	Rice	nucleus	43.39	41.9
TraesCS5D01G273600.1	Wheat	nucleus	42.88	41.34
Zm00001d020939_P001	Maize	nucleus	42.37	41.05
EER99089	Sorghum	nucleus	42.2	40.89
TraesCS5B01G265400.1	Wheat	nucleus	38.81	39.35
TraesCS5A01G265700.1	Wheat	nucleus	38.64	39.11
KRH43217	Soybean	nucleus	30.0	39.07
Os08t0508700-01	Rice	nucleus	40.68	38.77
KRH59382	Soybean	nucleus	30.17	38.53
KRH14682	Soybean	nucleus	39.83	38.52
TraesCS7A01G246100.1	Wheat	nucleus	40.0	38.44
TraesCS7D01G244600.1	Wheat	nucleus	40.0	38.44
OQU80929	Sorghum	nucleus	40.17	38.35
KRG89856	Soybean	nucleus	40.51	38.3
KRH73465	Soybean	nucleus	39.83	38.27
TraesCS7B01G145400.1	Wheat	nucleus	39.66	38.17
KRH18695	Soybean	nucleus	40.17	38.16
KRH18696	Soybean	nucleus	39.66	37.86
Zm00001d031445_P001	Maize	nucleus	39.83	37.18
KRG97597	Soybean	nucleus	29.15	37.07
KRH56267	Soybean	nucleus	32.2	24.8

Protein Annotations

Gene3D:1.10.3180.10	EntrezGene:100812970	MapMan:11.5.2.4	MapMan:15.5.11	UniProt:A0A0R0G3K8	EMBL:ACUP02009121
ncoils:Coil	InterPro:Ethylene_insens-like_DNA-bd	EnsemblPlantsGene:GLYMA_15G031800	GO:GO:0003674	GO:GO:0003700	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR023278	EnsemblPlants:KRH10163	ProteinID:KRH10163
ProteinID:KRH10163.1	PFAM:PF04873	PANTHER:PTHR33305	PANTHER:PTHR33305:SF11	SUPFAM:SSF116768	UniParc:UPI0001B63B6F
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr15:+:2560344..2563456

Molecular Weight (calculated)

66132.7 Da

IEP (calculated)

6.004

GRAVY (calculated)

-0.846

Length

590 amino acids

Sequence
(BLAST)

001: MGEIEEIGAD VCSDIEVDDI RCPNIAEKDV SDEEIEAEEL ERRMWKDRIK LKRLKEKQKL EAQQAAEKQK PRQSSDQARR KKMSRAQDGI LKYMLKLMEV
101: CKARGFVYGI IPEKGKPVSG SSDNIRAWWK EKVRFDKNGP AAIAKYEADC LAMSEADNSR NGNSQSILQD LQDATLGSLL SSLMQHCDPP QRKYPLEKGI
201: PPPWWPTGNE DWWSQLNLPH GQSPPYKKPH DLKKMWKVGV LTAVIKHMSP NIAKIRRHVR QSKCLQDKMT AKESAIWLGV LSREEALIRQ PSSDNGTSGI
301: TGVPPGVPVE NKQAATSSAS NYDVDGTDDG IGSVSSKENR RNHFMVTEPS DNLRRGRKPV QDTDQSEKQP RPKKPRRAND KPPAQADNEI LHVEPRSKGI
401: NINQTEAQVV GVQIHGNEQS NETDSAARPL ERGLEVPAQL PVPEVDQYSY LHTNNLVSSE SMYMSGKPMH YPELQNPDMH HETTYNLYNP AAGYEPGQDG
501: QQLHSANNEA VRLENDAVSL QGVHMKGDGI NGGDLQYFGK DAFQNELDRP MDHSFFGSPL SMSLDFGALG SPFHLDDFVC EDEMIQYFGA

Best Arabidopsis Sequence Match ( AT1G73730.1 )
(BLAST)

001: MGDLAMSVAD IRMENEPDDL ASDNVAEIDV SDEEIDADDL ERRMWKDRVR LKRIKERQKA GSQGAQTKET PKKISDQAQR KKMSRAQDGI LKYMLKLMEV
101: CKVRGFVYGI IPEKGKPVSG SSDNIRAWWK EKVKFDKNGP AAIAKYEEEC LAFGKSDGNR NSQFVLQDLQ DATLGSLLSS LMQHCDPPQR KYPLEKGTPP
201: PWWPTGNEEW WVKLGLPKSQ SPPYRKPHDL KKMWKVGVLT AVINHMLPDI AKIKRHVRQS KCLQDKMTAK ESAIWLAVLN QEESLIQQPS SDNGNSNVTE
301: THRRGNNADR RKPVVNSDSD YDVDGTEEAS GSVSSKDSRR NQIQKEQPTA ISHSVRDQDK AEKHRRRKRP RIRSGTVNRQ EEEQPEAQQR NILPDMNHVD
401: APLLEYNING THQEDDVVDP NIALGPEDNG LELVVPEFNN NYTYLPLVNE QTMMPVDERP MLYGPNPNQE LQFGSGYNFY NPSAVFVHNQ EDDILHTQIE
501: MNTQAPPHNS GFEEAPGGVL QPLGLLGNED GVTGSELPQY QSGILSPLTD LDFDYGGFGD DFSWFGA

Arabidopsis Description

EIL3SLIM1 [Source:UniProtKB/TrEMBL;Acc:A0A178VZZ3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.