Factsheet for Bra003831.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra030812.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G73730.1	Bra030812.1-P	AT1G56160.1	18218967

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY11093	Canola	nucleus	96.56	94.34
AT1G73730.1	Thale cress	nucleus	82.25	80.07
Bra015970.1-P	Field mustard	nucleus	84.06	79.05
Bra008110.1-P	Field mustard	nucleus	75.36	77.18
HORVU0Hr1G011440.1	Barley	nucleus	42.75	60.98
VIT_06s0004g01610.t01	Wine grape	nucleus	55.43	49.12
KRH23176	Soybean	nucleus	51.45	48.05
KRH10163	Soybean	nucleus	50.54	47.29
Solyc01g014480.2.1	Tomato	nucleus	49.46	40.44
PGSC0003DMT400076890	Potato	nucleus	49.28	40.18
PGSC0003DMT400055102	Potato	nucleus	47.83	39.52
Solyc01g006650.1.1	Tomato	nucleus	47.1	39.39
GSMUA_Achr9P27680_001	Banana	nucleus	42.75	38.69
GSMUA_Achr3P11160_001	Banana	nucleus	39.86	38.53
Os09t0490200-01	Rice	nucleus	42.39	38.3
TraesCS5D01G273600.1	Wheat	nucleus	42.21	38.07
Zm00001d020939_P001	Maize	nucleus	41.85	37.93
TraesCS5A01G265700.1	Wheat	nucleus	40.04	37.91
GSMUA_Achr8P25580_001	Banana	nucleus	42.21	37.82
TraesCS5B01G265400.1	Wheat	nucleus	39.67	37.63
EER99089	Sorghum	nucleus	41.3	37.44
Os08t0508700-01	Rice	nucleus	40.22	35.86
TraesCS7D01G244600.1	Wheat	nucleus	39.49	35.5
TraesCS7A01G246100.1	Wheat	nucleus	39.31	35.34
TraesCS7B01G145400.1	Wheat	nucleus	39.13	35.24
OQU80929	Sorghum	nucleus	38.95	34.79
Bra000528.1-P	Field mustard	nucleus	35.51	34.33
Bra001802.1-P	Field mustard	nucleus	35.69	33.91
Bra014281.1-P	Field mustard	nucleus	10.14	33.33
Zm00001d031445_P001	Maize	nucleus	37.86	33.07
Bra028601.1-P	Field mustard	nucleus	25.0	30.33
Bra002358.1-P	Field mustard	nucleus	26.09	28.24
Bra023927.1-P	Field mustard	nucleus	21.2	26.41
Bra035746.1-P	Field mustard	nucleus	21.92	24.69
Bra020146.1-P	Field mustard	nucleus	16.49	23.45
Bra006050.1-P	Field mustard	nucleus	13.77	23.1
Bra024354.1-P	Field mustard	nucleus	13.77	21.41

Protein Annotations

Gene3D:1.10.3180.10	MapMan:11.5.2.4	MapMan:15.5.11	EnsemblPlantsGene:Bra003831	EnsemblPlants:Bra003831.1	EnsemblPlants:Bra003831.1-P
ncoils:Coil	InterPro:Ethylene_insens-like_DNA-bd	GO:GO:0003674	GO:GO:0003700	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR023278	UniProt:M4CHZ8	PFAM:PF04873	PANTHER:PTHR33305
PANTHER:PTHR33305:SF21	SUPFAM:SSF116768	UniParc:UPI000254171E	SEG:seg	:	:

Description

AT1G73730 (E=8e-131) EIL3, SLIM1 | EIL3 (ETHYLENE-INSENSITIVE3-LIKE3); DNA binding / transcription factor

Coordinates

chrA07:+:15255580..15257410

Molecular Weight (calculated)

62537.1 Da

IEP (calculated)

5.112

GRAVY (calculated)

-0.878

Length

552 amino acids

Sequence
(BLAST)

001: MSGGDLPISV TDIRMENEPD DLAVAEIDVS DEEIDAEDLE RRMWKDRVRL KRIKERTKIV SSQTKETPKK VSEQAQRKKM SRAQDGILKY MLKLMEVCKV
101: RGFVYGIIPE KGKPVSGSSD NIRAWWKEKV KFDKNGPAAI AKYEEECLAF GKSDGDRNSQ FVLQDLQDAT LGSLLSSLMQ HCDPPQRKYP LEKGMPPPWW
201: PSGDEEWWVK LGLAKGQSPP YKKPHDLKKM WKVGVLTAVI NHMSPDIAWL AVLNQEESLT PQPSSDNGAS NVTETHRRGN NAERRRKTVI NSDSEYDVDG
301: REEASGSVSS KDNRRKQTQK EQPTATSQTV RDQDKSEKHR RRKRPRRTVN GQEEEQPETE QRIVLPDMNH VDAPLLEYNI NGTTHHQEEG VLGPEENSLE
401: LVIPEFNNNY TYLPPVNGQA MIPVEERPML YGPNTNQVLQ FGSGYNFYNP SAVFVHNQEE DLIHTQIEMN PQAPPHNNGF EAPGGVLQPH NLLGNEDSVT
501: GRDLPPQFQS DQDKLLDSNI LSPFSDLAFD SNTFFSGFDS YGVDDHLSWF GA

Best Arabidopsis Sequence Match ( AT1G73730.1 )
(BLAST)

001: MGDLAMSVAD IRMENEPDDL ASDNVAEIDV SDEEIDADDL ERRMWKDRVR LKRIKERQKA GSQGAQTKET PKKISDQAQR KKMSRAQDGI LKYMLKLMEV
101: CKVRGFVYGI IPEKGKPVSG SSDNIRAWWK EKVKFDKNGP AAIAKYEEEC LAFGKSDGNR NSQFVLQDLQ DATLGSLLSS LMQHCDPPQR KYPLEKGTPP
201: PWWPTGNEEW WVKLGLPKSQ SPPYRKPHDL KKMWKVGVLT AVINHMLPDI AKIKRHVRQS KCLQDKMTAK ESAIWLAVLN QEESLIQQPS SDNGNSNVTE
301: THRRGNNADR RKPVVNSDSD YDVDGTEEAS GSVSSKDSRR NQIQKEQPTA ISHSVRDQDK AEKHRRRKRP RIRSGTVNRQ EEEQPEAQQR NILPDMNHVD
401: APLLEYNING THQEDDVVDP NIALGPEDNG LELVVPEFNN NYTYLPLVNE QTMMPVDERP MLYGPNPNQE LQFGSGYNFY NPSAVFVHNQ EDDILHTQIE
501: MNTQAPPHNS GFEEAPGGVL QPLGLLGNED GVTGSELPQY QSGILSPLTD LDFDYGGFGD DFSWFGA

Arabidopsis Description

EIL3SLIM1 [Source:UniProtKB/TrEMBL;Acc:A0A178VZZ3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.