CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d031445_P001	Maize	nucleus	86.89	84.97
TraesCS7D01G244600.1	Wheat	nucleus	64.56	64.98
TraesCS7B01G145400.1	Wheat	nucleus	64.4	64.93
TraesCS7A01G246100.1	Wheat	nucleus	63.59	64.01
HORVU7Hr1G050560.1	Barley	nucleus	62.62	62.93
Os08t0508700-01	Rice	nucleus	61.81	61.71
EER99089	Sorghum	nucleus	55.83	56.65
HORVU7Hr1G050590.1	Barley	nucleus	25.24	53.42
GSMUA_Achr9P27680_001	Banana	nucleus	49.51	50.16
GSMUA_Achr8P25580_001	Banana	nucleus	49.03	49.19
GSMUA_Achr3P11160_001	Banana	nucleus	43.2	46.76
AT1G73730.1	Thale cress	nucleus	39.0	42.5
Bra008110.1-P	Field mustard	nucleus	36.25	41.56
Bra015970.1-P	Field mustard	nucleus	38.67	40.72
CDY60137	Canola	nucleus	38.51	40.55
CDX73009	Canola	nucleus	38.35	40.51
VIT_06s0004g01610.t01	Wine grape	nucleus	40.61	40.29
KRH10163	Soybean	nucleus	38.35	40.17
KRH23176	Soybean	nucleus	38.19	39.93
Bra003831.1-P	Field mustard	nucleus	34.79	38.95
CDY11093	Canola	nucleus	35.44	38.76
CDY47740	Canola	nucleus	36.41	38.66
Solyc01g006650.1.1	Tomato	nucleus	37.38	35.0
PGSC0003DMT400076890	Potato	nucleus	38.19	34.86
EER94933	Sorghum	nucleus	36.25	34.84
Solyc01g014480.2.1	Tomato	nucleus	38.03	34.81
PGSC0003DMT400055102	Potato	nucleus	37.38	34.58
OQU90496	Sorghum	nucleus	30.74	31.99
EES05301	Sorghum	nucleus	22.98	29.71
KXG26452	Sorghum	nucleus	22.01	28.94
EES02452	Sorghum	nucleus	8.74	16.77
OQU88707	Sorghum	nucleus, plastid	12.46	15.07

Protein Annotations

Gene3D:1.10.3180.10	MapMan:11.5.2.4	MapMan:15.5.11	EntrezGene:8064030	UniProt:C5YIS2	ncoils:Coil
ProteinID:EES15398.2	ProteinID:EES15399.1	InterPro:Ethylene_insens-like_DNA-bd	GO:GO:0003674	GO:GO:0003700	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR023278	ProteinID:OQU80928.1	EnsemblPlants:OQU80929
ProteinID:OQU80929	ProteinID:OQU80929.1	ProteinID:OQU80930.1	ProteinID:OQU80931.1	PFAM:PF04873	PANTHER:PTHR33305
PANTHER:PTHR33305:SF3	EnsemblPlantsGene:SORBI_3007G210700	SUPFAM:SSF116768	unigene:Sbi.21454	UniParc:UPI0001A87A37	RefSeq:XP_002445904.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:63959262..63963057

Molecular Weight (calculated)

68189.4 Da

IEP (calculated)

5.994

GRAVY (calculated)

-0.649

Length

618 amino acids

Sequence
(BLAST)

001: MTDHLAIIAS ELGDATDFEV DGIDNLSEND VSDEEIDADE LARRMWKDKV KLKRIRERQQ KLALQRLELE KSKTKKISDQ ALRKKMTRAQ DGILKYMLKL
101: MEVCNARGFV YGIIPEKGKP VSGASDNIRE WWKEKVKFDK NGPAAIVKYE VEHSMLSNPK SSGAMNQHSL MDLQDGTLGS LLSALMQHCS PQQRSYPLDK
201: GVPPPWWPSG NEPWWPALGL PKGEAPPYRK PHDLKKVWKV GVLTGVIKHM APNFDKIRNR VRKSKCLQDK MTAKESLIWL GVLQREEKSI HSFGSALLPI
301: TQHSTSEDRT EGIYSSSDEY DVDRLEQPPR STSSKDDEGD AQPVLQIRGE QISTRVPKRK RHDKPSNQLA ISKEETTKPK PRQRNRPSAR SPVAEVEVEV
401: TQRNDNPPDV SCNAADGMNL IDPIDVVGMT NQPTSSSHAP PTIGALQQHG DCQGNFLSPG AVINNYNSNQ AASAAQSSTY LGDHPLACEG SDIANSWSGH
501: SFRQDIGIGP IGFNPSQAVH QDLAMQQPLP LPMDHQAPII GTGALATNDS YSLPTAGSGN SGTIVGETHQ QFMDDPFFGE AGDSTFGGLP FSLVPFSSPM
601: LNFDDLVDDD DLMPYLGT

Best Arabidopsis Sequence Match ( AT1G73730.1 )
(BLAST)

001: MGDLAMSVAD IRMENEPDDL ASDNVAEIDV SDEEIDADDL ERRMWKDRVR LKRIKERQKA GSQGAQTKET PKKISDQAQR KKMSRAQDGI LKYMLKLMEV
101: CKVRGFVYGI IPEKGKPVSG SSDNIRAWWK EKVKFDKNGP AAIAKYEEEC LAFGKSDGNR NSQFVLQDLQ DATLGSLLSS LMQHCDPPQR KYPLEKGTPP
201: PWWPTGNEEW WVKLGLPKSQ SPPYRKPHDL KKMWKVGVLT AVINHMLPDI AKIKRHVRQS KCLQDKMTAK ESAIWLAVLN QEESLIQQPS SDNGNSNVTE
301: THRRGNNADR RKPVVNSDSD YDVDGTEEAS GSVSSKDSRR NQIQKEQPTA ISHSVRDQDK AEKHRRRKRP RIRSGTVNRQ EEEQPEAQQR NILPDMNHVD
401: APLLEYNING THQEDDVVDP NIALGPEDNG LELVVPEFNN NYTYLPLVNE QTMMPVDERP MLYGPNPNQE LQFGSGYNFY NPSAVFVHNQ EDDILHTQIE
501: MNTQAPPHNS GFEEAPGGVL QPLGLLGNED GVTGSELPQY QSGILSPLTD LDFDYGGFGD DFSWFGA

Arabidopsis Description

EIL3SLIM1 [Source:UniProtKB/TrEMBL;Acc:A0A178VZZ3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.