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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d003451_P001 Maize nucleus 83.19 73.5
Os04t0456900-00 Rice nucleus 45.96 63.72
TraesCS2B01G340200.1 Wheat nucleus 58.72 59.23
TraesCS2A01G342500.1 Wheat nucleus 57.66 58.15
TraesCS2D01G320800.1 Wheat nucleus 57.45 58.06
HORVU2Hr1G079900.1 Barley nucleus 57.66 57.66
EES05301 Sorghum nucleus 48.72 47.91
GSMUA_Achr10P... Banana nucleus 33.62 46.88
KRH31276 Soybean nucleus 33.4 39.45
CDX81161 Canola nucleus 15.53 38.02
KRH43217 Soybean nucleus 33.4 34.66
Solyc03g096630.1.1 Tomato nucleus 31.49 34.1
KRG97597 Soybean nucleus 33.62 34.05
KRH59382 Soybean nucleus 32.98 33.55
PGSC0003DMT400053147 Potato nucleus 31.49 32.74
VIT_00s0357g00120.t01 Wine grape nucleus 33.4 32.44
Bra028601.1-P Field mustard nucleus 31.06 32.09
CDX85778 Canola nucleus 31.06 32.09
CDY40078 Canola nucleus 30.85 32.01
AT5G10120.1 Thale cress nucleus 31.28 31.21
Solyc04g054840.1.1 Tomato nucleus 30.43 28.43
AT5G65100.1 Thale cress nucleus 33.19 28.01
Bra006050.1-P Field mustard nucleus 17.23 24.62
CDX78369 Canola nucleus 17.23 24.62
PGSC0003DMT400043160 Potato nucleus 14.47 24.46
OQU90496 Sorghum nucleus 28.72 22.73
EER94933 Sorghum nucleus 30.64 22.39
EER99089 Sorghum nucleus 28.94 22.33
OQU80929 Sorghum nucleus 28.94 22.01
Bra024354.1-P Field mustard nucleus 15.74 20.85
CDY08821 Canola nucleus 15.11 20.0
CDY14539 Canola nucleus 15.53 19.62
OQU88707 Sorghum nucleus, plastid 13.62 12.52
EES02452 Sorghum nucleus 8.51 12.42
Protein Annotations
Gene3D:1.10.3180.10MapMan:11.5.2.4MapMan:15.5.11UniProt:A0A1B6PLA5InterPro:Ethylene_insens-like_DNA-bdGO:GO:0003674
GO:GO:0003700GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006139
GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987InterPro:IPR023278
EnsemblPlants:KXG26452ProteinID:KXG26452ProteinID:KXG26452.1PFAM:PF04873PANTHER:PTHR33305PANTHER:PTHR33305:SF4
EnsemblPlantsGene:SORBI_3006G104000SUPFAM:SSF116768UniParc:UPI00081ACE96SEG:seg::
Description
hypothetical protein
Coordinates
chr6:+:47392162..47394762
Molecular Weight (calculated)
51822.5 Da
IEP (calculated)
5.089
GRAVY (calculated)
-0.767
Length
470 amino acids
Sequence
(BLAST)
001: MENYCESIDY YQKPCHAPNS PTMDDEPKDD GKGHKGKAVV DHHAGAADQH EQPESQEEFF SDSESGCESI EVADLKKRMW KDQLLLMKLE GRSGRDHRRH
101: GGEGQLQLQP GSTDDVLIQV KDEESPENRY RRKAMLRAQD GVIRHMLKMM EACNARGFVY GVVDETGVPV SGSSDSLRGW WKDEVGFDRA GPMALSALDQ
201: ECPGGSPMAA ASFLHGLHDI QDSTLGSLLS ALIQHCEPPQ RSFPLDRGLA PPWWPTGREA WWGMQGDAPA HQGPPPYRKP HDLKKAWKIS LLSAVIKHLT
301: PRFDQMRKLV WQSKRLQHKM SARDADAWSK VITQEEALDR RAQRALQITP LDEEEEDDDD GGPDAGADAS GVDSPLAAAQ HVEKRKRKGT DDGEHKAKGA
401: VAVPDGGQQA APVTHDSMLQ GGLQRGGTAP DGSAAVHDDD MMLQSLLGIA DVVDMSDFPN SPIWQWGVYD
Best Arabidopsis Sequence Match ( AT5G65100.1 )
(BLAST)
001: MVEVQDLEPL SPIQDYDEDD LEEDVDEFER FGEEISYDDL KKRMWKDRNL MCKLKQQKRD NLNSVISSPS SSTSASSSSS SSVIVRRTEA SRRKKMARSQ
101: DSVLKYMMKI MEVCKAQGFV YGIVPEKGKP VTGSSDSLRR WWKENVQFDQ TAPNAVSDYL TLAAAQLISS NESLDPNSYI HMLHELQDTT LGSLLSALMQ
201: HCVPPQRRFP LEKGLAPPWW PNGTELWWGE QGAAAFEHGP PPYRKPHDLR KAWKVSVLAA VIKHMSPNLE RVRRLARQSK CLQDKMMAKE TDTWSRVLNQ
301: EEARLNRLKI SDDEDEDRDQ EQARFTCFDQ EPSLNTCFIV GQDQEPLGSM RKDKRVDQEF SSNDCFLVAQ DQEPRKGKKA DQEWSPNSCF LVDQEPLGNK
401: RKGEFVEKEA MLSNVYTCQN SSCPSSDVSL GFVDKNLRTG HEIECLYGTP ELVNQSSGGG SDGFVRSITT SDDDYSASSK AEDTRDYHNQ DGNWLDYLWF
501: ERLHDLNFSD QGFEDQTSTV DLNQLPDHSD SNQTMNEDDI SLWDMGCEDK DIYMSQD
Arabidopsis Description
EIL5ETHYLENE INSENSITIVE 3-like 5 protein [Source:UniProtKB/Swiss-Prot;Acc:Q9FJQ5]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.