Factsheet for PGSC0003DMT400053147

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g054840.1.1	Tomato	nucleus	83.41	74.95
CDX81161	Canola	nucleus	23.01	54.17
KRH31276	Soybean	nucleus	42.92	48.74
KRH43217	Soybean	nucleus	48.67	48.57
KRH59382	Soybean	nucleus	49.34	48.27
VIT_00s0357g00120.t01	Wine grape	nucleus	51.33	47.93
CDY40078	Canola	nucleus	44.25	44.15
CDX85778	Canola	nucleus	44.25	43.96
Bra028601.1-P	Field mustard	nucleus	44.25	43.96
GSMUA_Achr10P...	Banana	nucleus	32.52	43.62
KRG97597	Soybean	nucleus	44.25	43.1
AT5G10120.1	Thale cress	nucleus	44.03	42.25
CDX78369	Canola	nucleus	28.1	38.6
Bra006050.1-P	Field mustard	nucleus	28.1	38.6
PGSC0003DMT400043160	Potato	nucleus	23.23	37.77
Os04t0456900-00	Rice	nucleus	28.32	37.76
AT5G65100.1	Thale cress	nucleus	45.58	36.98
Zm00001d016924_P001	Maize	nucleus	33.85	35.66
Zm00001d050861_P001	Maize	nucleus	33.63	34.47
TraesCS3B01G428000.1	Wheat	nucleus	32.96	34.1
TraesCS6D01G326600.1	Wheat	nucleus	34.51	34.06
TraesCS3A01G396000.1	Wheat	nucleus	33.85	33.85
TraesCS2A01G342500.1	Wheat	nucleus	34.51	33.48
TraesCSU01G080900.1	Wheat	nucleus	33.41	33.41
TraesCS6B01G376700.1	Wheat	nucleus	33.85	33.41
TraesCS3D01G390000.1	Wheat	nucleus	33.63	33.19
TraesCS2B01G340200.1	Wheat	nucleus	34.07	33.05
TraesCS2D01G320800.1	Wheat	nucleus	33.63	32.69
EES05301	Sorghum	nucleus	34.51	32.64
HORVU2Hr1G079900.1	Barley	nucleus	33.63	32.34
HORVU3Hr1G089250.3	Barley	nucleus	32.52	31.82
KXG26452	Sorghum	nucleus	32.74	31.49
Bra024354.1-P	Field mustard	nucleus	24.56	31.27
PGSC0003DMT400070751	Potato	nucleus	41.15	31.1
CDY08821	Canola	nucleus	24.11	30.7
PGSC0003DMT400015145	Potato	nucleus	40.49	30.55
PGSC0003DMT400022477	Potato	nucleus	41.37	30.46
PGSC0003DMT400015148	Potato	nucleus	40.49	30.0
CDY14539	Canola	nucleus	24.34	29.57
Zm00001d003451_P001	Maize	nucleus	34.07	28.95
PGSC0003DMT400055102	Potato	nucleus	34.73	23.5
PGSC0003DMT400076890	Potato	nucleus	34.29	22.9

Protein Annotations

Gene3D:1.10.3180.10	MapMan:11.5.2.4	MapMan:15.5.11	InterPro:Ethylene_insens-like_DNA-bd	GO:GO:0003674	GO:GO:0003700
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR023278	UniProt:M1BUH2
PFAM:PF04873	EnsemblPlantsGene:PGSC0003DMG400020621	PGSC:PGSC0003DMG400020621	EnsemblPlants:PGSC0003DMT400053147	PANTHER:PTHR33305	PANTHER:PTHR33305:SF10
SUPFAM:SSF116768	UniParc:UPI000295C4E9	SEG:seg	:	:	:

Description

Transcription factor [Source:PGSC_GENE;Acc:PGSC0003DMG400020621]

Coordinates

chr4:+:51669045..51670524

Molecular Weight (calculated)

52598.2 Da

IEP (calculated)

4.944

GRAVY (calculated)

-0.830

Length

452 amino acids

Sequence
(BLAST)

001: MEPLSPINSE EIIEDEEINY DDLKRRMWED RMRMQILKRD MIINSTSEEL SLDQESEEES EAKQEQSRRK KMSRAQDSIL KYMVKIMEIC KGQGFVYGIV
101: PEKGKPVTGS SDSLREWWKD KVRFEKNAPN AILPKLVQEN HVNSCMDLLN DLQDTTLGSL LSSLMQHCIP PQRRFPLDKG LAPPWWPTGK ELWWGDQGFS
201: QQQGPPPYKK PHDLKKAWKV SVLAGIIKHM SVNFDKMRML VKQSKSLQNK MTAKETATWS KVVNQEEVLV EMTQKSLRII SISKEEEDDE YLALRRKEKR
301: KGTVFESDID IDDMLYQNLN CVQSELGVGF YRTMNEQQSV RGEDESLNMF MSNFTSLIGR QPRPHEEIMV GDDHHGEHDW VNMEIKRTFE NYHIAQNANG
401: GSVEENFQGF WGDNNNVLHY GNIMNLNDTP KENEQHQSPL SVWDLAYEDT SE

Best Arabidopsis Sequence Match ( AT5G10120.1 )
(BLAST)

001: MVEVEELEPL SPMDDEEEEI SYDDLKRRMW KDRNLMEKKL KQQKRHSNDV VSFTTHRAEA SRRKKMARSQ DSVLKYMMKI MEVCKAKGFV YGIVPEKGKP
101: ITGSSDSLRR WWKENVQFDQ NAPDAITDYL ALAAAAAAAE LIDKSSSSSS LLHMLQELQD TTLGSLLSAL MQHCMPPQRR FPLEKGIAPP WWPTGTELWW
201: GEQGAAHEHG APPYRKPHDL RKSWKVSVLA AVIKHMSPNL GRVRRLARQS KSLQDKMMAK ETDTWSRVLN QEEALLNIKD LKISEDQDDQ ESSGSKRKSE
301: SMEPSKSVYT CQNSSCPKSD VSFGFGDKNS RTGHEIQCLY GSNQEPSQSG EYTSSLLETV PSIVTNSTSE DDYYNVSSRA LDKRDDDDHS INGNWMEYFW
401: LEKMQQEFHC SRRFEDDEGT GTDFDQLTES DRSDNVNLNQ LTKSDRSDNV NRSAFSVWDM GCEDKDIYMF D

Arabidopsis Description

EIL4Putative ETHYLENE INSENSITIVE 3-like 4 protein [Source:UniProtKB/Swiss-Prot;Acc:Q9LX16]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.