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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 6
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400053147 Potato nucleus 74.95 83.41
CDX81161 Canola nucleus 22.27 58.33
Solyc03g096630.1.1 Tomato nucleus 43.34 50.23
KRH43217 Soybean nucleus 45.13 50.11
KRH59382 Soybean nucleus 45.92 50.0
VIT_00s0357g00120.t01 Wine grape nucleus 47.12 48.97
KRH31276 Soybean nucleus 38.37 48.49
CDY40078 Canola nucleus 42.54 47.24
Bra028601.1-P Field mustard nucleus 42.54 47.03
CDX85778 Canola nucleus 42.54 47.03
KRG97597 Soybean nucleus 41.35 44.83
AT5G10120.1 Thale cress nucleus 41.95 44.8
GSMUA_Achr10P... Banana nucleus 29.42 43.92
Bra006050.1-P Field mustard nucleus 26.64 40.73
CDX78369 Canola nucleus 26.64 40.73
AT5G65100.1 Thale cress nucleus 43.34 39.14
Os04t0456900-00 Rice nucleus 24.45 36.28
Bra024354.1-P Field mustard nucleus 23.86 33.8
Zm00001d016924_P001 Maize nucleus 28.63 33.57
Zm00001d050861_P001 Maize nucleus 29.22 33.33
CDY08821 Canola nucleus 23.46 33.24
TraesCS2A01G342500.1 Wheat nucleus 30.22 32.62
TraesCS2B01G340200.1 Wheat nucleus 30.22 32.62
TraesCS3A01G396000.1 Wheat nucleus 29.22 32.52
TraesCS3B01G428000.1 Wheat nucleus 28.23 32.49
EES05301 Sorghum nucleus 30.82 32.43
TraesCS6D01G326600.1 Wheat nucleus 29.42 32.31
CDY14539 Canola nucleus 23.86 32.26
TraesCSU01G080900.1 Wheat nucleus 28.83 32.08
TraesCS2D01G320800.1 Wheat nucleus 29.62 32.04
TraesCS6B01G376700.1 Wheat nucleus 29.03 31.88
TraesCS3D01G390000.1 Wheat nucleus 29.03 31.88
HORVU2Hr1G079900.1 Barley nucleus 29.22 31.28
HORVU3Hr1G089250.3 Barley nucleus 28.03 30.52
KXG26452 Sorghum nucleus 28.43 30.43
Solyc01g009170.2.1 Tomato nucleus 36.58 29.97
Solyc06g073730.1.1 Tomato nucleus 35.98 29.92
Solyc06g073720.1.1 Tomato nucleus 35.98 29.67
Solyc01g096810.2.1 Tomato nucleus 34.79 29.12
Zm00001d003451_P001 Maize nucleus 30.22 28.57
Solyc01g006650.1.1 Tomato nucleus 31.41 23.94
Solyc01g014480.2.1 Tomato nucleus 31.01 23.11
Protein Annotations
Gene3D:1.10.3180.10MapMan:11.5.2.4MapMan:15.5.11ncoils:CoilInterPro:Ethylene_insens-like_DNA-bdGO:GO:0003674
GO:GO:0003676GO:GO:0003677GO:GO:0003700GO:GO:0005488GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005634GO:GO:0006139GO:GO:0006355GO:GO:0007154GO:GO:0007165
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009719GO:GO:0009873GO:GO:0009987
GO:GO:0071281InterPro:IPR023278UniProt:K4BSN2PFAM:PF04873PANTHER:PTHR33305PANTHER:PTHR33305:SF10
SUPFAM:SSF116768EnsemblPlantsGene:Solyc04g054840.1EnsemblPlants:Solyc04g054840.1.1UniParc:UPI0002765A41SEG:seg:
Description
No Description!
Coordinates
chr4:-:53301508..53303019
Molecular Weight (calculated)
58364.8 Da
IEP (calculated)
4.767
GRAVY (calculated)
-0.864
Length
503 amino acids
Sequence
(BLAST)
001: MVGFEEIIEP FSPINSELVE ENKEIDDEEI NYDDLKRRMW KDRKRMQIFK ANKRDMMINT SATCSEELSL DQDEDEEEEE DEESQAKKEQ SRRKKMSRAQ
101: DSVLKYMVKI MEICKGQGFV YGIVPEKGKP VTGSSDSLRE WWKDKVRFEK NAPNAIAAFL PKLVEENVLV PNSCMDLLND LQDTTLGSLL SSLMRHCIPP
201: QRRFPLDKGL APPWWPTGTE LWWGDQGFSQ EEGPPPYKKP RDLKKAWKVS VLAGIIKHMS VNFDKMRRLV KQSKSLQNKM TAKETATWSR VVNQEEVLIK
301: MTEKALKIST SKEEDQENVE GIKEDLALRR NEKRKGVFES DIDTEDMLYQ NLNCAQSELG VGFPYKNSRM DNETTCSHHG KQTMNEQQSV NDESLNMFMN
401: NFTSLIGTQP ILHKEIMVGD DHHSEHDGMN MDIKRSVDNY HIAQYANRGS IEENFEVFWG DNNVLEQHHY DSIMNLNDTP KENEHYQSPL SVWDLAYEDP
501: SEL
Best Arabidopsis Sequence Match ( AT5G10120.1 )
(BLAST)
001: MVEVEELEPL SPMDDEEEEI SYDDLKRRMW KDRNLMEKKL KQQKRHSNDV VSFTTHRAEA SRRKKMARSQ DSVLKYMMKI MEVCKAKGFV YGIVPEKGKP
101: ITGSSDSLRR WWKENVQFDQ NAPDAITDYL ALAAAAAAAE LIDKSSSSSS LLHMLQELQD TTLGSLLSAL MQHCMPPQRR FPLEKGIAPP WWPTGTELWW
201: GEQGAAHEHG APPYRKPHDL RKSWKVSVLA AVIKHMSPNL GRVRRLARQS KSLQDKMMAK ETDTWSRVLN QEEALLNIKD LKISEDQDDQ ESSGSKRKSE
301: SMEPSKSVYT CQNSSCPKSD VSFGFGDKNS RTGHEIQCLY GSNQEPSQSG EYTSSLLETV PSIVTNSTSE DDYYNVSSRA LDKRDDDDHS INGNWMEYFW
401: LEKMQQEFHC SRRFEDDEGT GTDFDQLTES DRSDNVNLNQ LTKSDRSDNV NRSAFSVWDM GCEDKDIYMF D
Arabidopsis Description
EIL4Putative ETHYLENE INSENSITIVE 3-like 4 protein [Source:UniProtKB/Swiss-Prot;Acc:Q9LX16]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.