Factsheet for HORVU2Hr1G079900.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G340200.1	Wheat	nucleus	91.91	92.7
TraesCS2A01G342500.1	Wheat	nucleus	90.43	91.2
TraesCS2D01G320800.1	Wheat	nucleus	90.0	90.97
Os04t0456900-00	Rice	nucleus	45.11	62.54
KXG26452	Sorghum	nucleus	57.66	57.66
Zm00001d003451_P001	Maize	nucleus	64.89	57.33
GSMUA_Achr10P...	Banana	nucleus	36.6	51.04
HORVU3Hr1G089250.3	Barley	nucleus	50.0	50.87
KRH31276	Soybean	nucleus	33.19	39.2
CDX81161	Canola	nucleus	15.96	39.06
KRH43217	Soybean	nucleus	34.04	35.32
Solyc03g096630.1.1	Tomato	nucleus	32.34	35.02
KRH59382	Soybean	nucleus	33.83	34.42
HORVU0Hr1G011440.1	Barley	nucleus	28.3	34.37
KRG97597	Soybean	nucleus	33.4	33.84
PGSC0003DMT400053147	Potato	nucleus	32.34	33.63
CDX85778	Canola	nucleus	32.34	33.41
Bra028601.1-P	Field mustard	nucleus	32.34	33.41
CDY40078	Canola	nucleus	31.91	33.11
AT5G10120.1	Thale cress	nucleus	31.91	31.85
VIT_00s0357g00120.t01	Wine grape	nucleus	31.91	30.99
Solyc04g054840.1.1	Tomato	nucleus	31.28	29.22
AT5G65100.1	Thale cress	nucleus	33.19	28.01
HORVU7Hr1G050590.1	Barley	nucleus	16.6	26.71
CDX78369	Canola	nucleus	18.3	26.14
Bra006050.1-P	Field mustard	nucleus	18.3	26.14
HORVU4Hr1G051680.1	Barley	nucleus	35.53	25.65
PGSC0003DMT400043160	Potato	nucleus	14.68	24.82
HORVU5Hr1G073380.1	Barley	nucleus	31.28	24.14
HORVU7Hr1G050560.1	Barley	nucleus	31.49	24.07
CDY08821	Canola	nucleus	16.38	21.69
Bra024354.1-P	Field mustard	nucleus	16.38	21.69
CDY14539	Canola	nucleus	16.81	21.24

Protein Annotations

Gene3D:1.10.3180.10	MapMan:11.5.2.4	MapMan:15.5.11	InterPro:Ethylene_insens-like_DNA-bd	GO:GO:0003674	GO:GO:0003700
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:HORVU2Hr1G079900	EnsemblPlants:HORVU2Hr1G079900.1
InterPro:IPR023278	UniProt:M0URC9	PFAM:PF04873	PANTHER:PTHR33305	PANTHER:PTHR33305:SF4	SUPFAM:SSF116768
UniParc:UPI000294ED62	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr2H:-:577912967..577914379

Molecular Weight (calculated)

52000.0 Da

IEP (calculated)

4.827

GRAVY (calculated)

-0.646

Length

470 amino acids

Sequence
(BLAST)

001: MGSPSNDRPL PGLHELPRPA MDIGKAHADP ANPHGVAVAA EADLQDDSES ESVSESIEIA DLKKRMWKDQ LLLMKLEGSS GHDRRATAQR PGTDLAQAEK
101: EAEMPESRYR RKAMLRAQDG VLRHMLRMME ACNARGFVYG IVDETGMPVS GSSDSLRGWW KEDVGFERTG PTALVGPTTA VESPGSSFLH GLLDIQDSTL
201: GSLLSALIQH CEPPQRSFPL DRGLPPPWWP TGHEVWWGLQ GETQAHQGPP PYRKPHDLKK AWKISLLSAV IKHLSPRFDQ MRKLVWQSKR LQHRMSARDA
301: ETWSRVITQE ETLDRQVQRA LRITPLEEEP GDDDDKVPLQ EAERGLHIDK RKREVDHESA GGSVDSGSGR ELGALPGIEG VAEADRNSID ELMKMYYSCL
401: QGTDCGEQEI KDVAAGGREQ SNTSSAETGV LDAAMVHDDM FDDFLSVADV VDMSDFPGSP IWHWGSSDLD

Best Arabidopsis Sequence Match ( AT1G73730.2 )
(BLAST)

001: MENEPDDLAS DNVAEIDVSD EEIDADDLER RMWKDRVRLK RIKERQKAGS QGAQTKETPK KISDQAQRKK MSRAQDGILK YMLKLMEVCK VRGFVYGIIP
101: EKGKPVSGSS DNIRAWWKEK VKFDKNGPAA IAKYEEECLA FGKSDGNRNS QFVLQDLQDA TLGSLLSSLM QHCDPPQRKY PLEKGTPPPW WPTGNEEWWV
201: KLGLPKSQSP PYRKPHDLKK MWKVGVLTAV INHMLPDIAK IKRHVRQSKC LQDKMTAKES AIWLAVLNQE ESLIQQPSSD NGNSNVTETH RRGNNADRRK
301: PVVNSDSDYD VDGTEEASGS VSSKDSRRNQ IQKEQPTAIS HSVRDQDKAE KHRRRKRPRI RSGTVNRQEE EQPEAQQRNI LPDMNHVDAP LLEYNINGTH
401: QEDDVVDPNI ALGPEDNGLE LVVPEFNNNY TYLPLVNEQT MMPVDERPML YGPNPNQELQ FGSGYNFYNP SAVFVHNQED DILHTQIEMN TQAPPHNSGF
501: EEAPGGVLQP LGLLGNEDGV TGSELPQYQS GILSPLTDLD FDYGGFGDDF SWFGA

Arabidopsis Description

EIL3SLIM1 [Source:UniProtKB/TrEMBL;Acc:A0A178VZZ3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.