CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX85778	Canola	nucleus	97.13	96.7
CDX81161	Canola	nucleus	38.19	90.1
CDX78369	Canola	nucleus	59.16	81.46
AT5G10120.1	Thale cress	nucleus	82.34	79.19
CDY08821	Canola	nucleus	44.15	56.34
CDY14539	Canola	nucleus	45.25	55.11
KRH43217	Soybean	nucleus	47.02	47.02
KRH31276	Soybean	nucleus	40.4	45.98
KRH59382	Soybean	nucleus	45.92	45.02
GSMUA_Achr10P...	Banana	nucleus	33.33	44.81
VIT_00s0357g00120.t01	Wine grape	nucleus	47.46	44.42
PGSC0003DMT400053147	Potato	nucleus	44.15	44.25
KRG97597	Soybean	nucleus	45.03	43.97
Solyc03g096630.1.1	Tomato	nucleus	41.72	43.55
Solyc04g054840.1.1	Tomato	nucleus	47.24	42.54
Os04t0456900-00	Rice	nucleus	27.81	37.17
TraesCS3B01G428000.1	Wheat	nucleus	34.66	35.93
TraesCS3A01G396000.1	Wheat	nucleus	35.32	35.4
TraesCS3D01G390000.1	Wheat	nucleus	35.54	35.15
Zm00001d050861_P001	Maize	nucleus	33.55	34.47
Zm00001d016924_P001	Maize	nucleus	32.23	34.03
HORVU3Hr1G089250.3	Barley	nucleus	34.66	33.98
TraesCS6D01G326600.1	Wheat	nucleus	33.77	33.41
TraesCSU01G080900.1	Wheat	nucleus	33.11	33.19
PGSC0003DMT400043160	Potato	nucleus	20.31	33.09
TraesCS6B01G376700.1	Wheat	nucleus	33.11	32.75
EES05301	Sorghum	nucleus	34.44	32.64
TraesCS2B01G340200.1	Wheat	nucleus	33.55	32.62
TraesCS2D01G320800.1	Wheat	nucleus	33.33	32.47
TraesCS2A01G342500.1	Wheat	nucleus	33.33	32.4
CDX82228	Canola	nucleus	38.63	32.35
HORVU2Hr1G079900.1	Barley	nucleus	33.11	31.91
CDY32390	Canola	nucleus	38.41	31.69
CDY38540	Canola	nucleus	38.85	31.26
CDX83250	Canola	nucleus	39.07	31.05
KXG26452	Sorghum	nucleus	32.01	30.85
CDY27563	Canola	nucleus	38.63	29.81
Zm00001d003451_P001	Maize	nucleus	33.55	28.57
CDX92408	Canola	nucleus	31.35	28.46
CDY59518	Canola	nucleus	30.91	27.5
CDX73009	Canola	nucleus	33.33	25.81
CDY60137	Canola	nucleus	33.11	25.55
CDY47740	Canola	nucleus	32.67	25.43
CDY70411	Canola	nucleus	9.27	25.0
CDY11093	Canola	nucleus	30.46	24.42
CDY46568	Canola	nucleus	8.83	23.81
CDY09099	Canola	nucleus	18.54	21.65
CDY06379	Canola	nucleus	22.52	20.94
CDY60391	Canola	nucleus	18.98	20.24
CDY19606	Canola	nucleus	20.53	20.22

Protein Annotations

Gene3D:1.10.3180.10	MapMan:11.5.2.4	MapMan:15.5.11	GO:A0A078HTL3	UniProt:A0A078HTL3	EnsemblPlants:CDY40078
ProteinID:CDY40078	ProteinID:CDY40078.1	ncoils:Coil	InterPro:Ethylene_insens-like_DNA-bd	GO:GO:0003674	GO:GO:0003700
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00068988001	InterPro:IPR023278
PFAM:PF04873	PANTHER:PTHR33305	PANTHER:PTHR33305:SF1	SUPFAM:SSF116768	UniParc:UPI0004EB3ED6	SEG:seg

Description

BnaC02g00520DBnaC02g00520D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HTL3]

Coordinates

chrLK032463:+:90103..91464

Molecular Weight (calculated)

51416.1 Da

IEP (calculated)

4.735

GRAVY (calculated)

-0.786

Length

453 amino acids

Sequence
(BLAST)

001: MVEVEELEPL SPVEDGDEGE EEEDISYDDL KRRMWKDQNL MEKLKQQKRD NTDVVSLSTH RAEASRRKKM ARSQDSVLKY MMKIMEVCKA KGFVYGIVPE
101: KGKAITGSSD SLRRWWKENV DFDQNAPNAV ADYLTLAAAA AELIEKEPSS LLHMLQELQD TTLGSLLSAL MQHCAPPQRR FPLEKGIAPP WWPTGTELWW
201: GEQGAAHEQG VPPYRKPHDL RKSWKVSVLA AVIKHMSPNL GRVRRLARQS KCLQDKMMAK ETDTWSRVLN QEEALLNIKD LKISEDQEAS GSKTKRKGDN
301: IMEPSKSVYT CQNSSCPKSD ASLGFMDKNS RTGHEIQCLY GSSSQSTGDT SSVLETAPSI GTNTTSEDDY CASSSAMGKR DNDAHSNWLD YLWFERMQQE
401: FNCSRRLEDV DDDTAVDLNQ LLESDQSSDN VDQNNFSVWD MGCEDKDIYM FDY

Best Arabidopsis Sequence Match ( AT5G10120.1 )
(BLAST)

001: MVEVEELEPL SPMDDEEEEI SYDDLKRRMW KDRNLMEKKL KQQKRHSNDV VSFTTHRAEA SRRKKMARSQ DSVLKYMMKI MEVCKAKGFV YGIVPEKGKP
101: ITGSSDSLRR WWKENVQFDQ NAPDAITDYL ALAAAAAAAE LIDKSSSSSS LLHMLQELQD TTLGSLLSAL MQHCMPPQRR FPLEKGIAPP WWPTGTELWW
201: GEQGAAHEHG APPYRKPHDL RKSWKVSVLA AVIKHMSPNL GRVRRLARQS KSLQDKMMAK ETDTWSRVLN QEEALLNIKD LKISEDQDDQ ESSGSKRKSE
301: SMEPSKSVYT CQNSSCPKSD VSFGFGDKNS RTGHEIQCLY GSNQEPSQSG EYTSSLLETV PSIVTNSTSE DDYYNVSSRA LDKRDDDDHS INGNWMEYFW
401: LEKMQQEFHC SRRFEDDEGT GTDFDQLTES DRSDNVNLNQ LTKSDRSDNV NRSAFSVWDM GCEDKDIYMF D

Arabidopsis Description

EIL4Putative ETHYLENE INSENSITIVE 3-like 4 protein [Source:UniProtKB/Swiss-Prot;Acc:Q9LX16]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.