CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra002358.1-P	Field mustard	nucleus	99.6	97.45
CDY59518	Canola	nucleus	95.79	93.91
AT5G21120.2	Thale cress	nucleus	63.53	60.38
CDY09099	Canola	nucleus	45.29	58.25
CDY70411	Canola	nucleus	13.03	38.69
CDY46568	Canola	nucleus	12.63	37.5
CDX82228	Canola	nucleus	38.48	35.49
CDY32390	Canola	nucleus	38.88	35.34
CDX81161	Canola	nucleus	13.23	34.38
CDY38540	Canola	nucleus	38.48	34.1
CDX83250	Canola	nucleus	38.88	34.04
CDY27563	Canola	nucleus	38.48	32.71
CDY40078	Canola	nucleus	28.46	31.35
CDX85778	Canola	nucleus	28.46	31.21
CDY60137	Canola	nucleus	31.06	26.41
CDX73009	Canola	nucleus	30.86	26.32
CDY06379	Canola	nucleus	25.45	26.08
CDY11093	Canola	nucleus	29.26	25.84
CDY19606	Canola	nucleus	23.65	25.65
CDY47740	Canola	nucleus	29.86	25.6
CDY60391	Canola	nucleus	21.24	24.94
CDY08821	Canola	nucleus	16.23	22.82
CDY14539	Canola	nucleus	16.63	22.31
CDX78369	Canola	nucleus	14.43	21.88

Protein Annotations

Gene3D:1.10.3180.10	MapMan:11.5.2.4	MapMan:15.5.11	GO:A0A078DYN9	EnsemblPlants:CDX92408	ProteinID:CDX92408
ProteinID:CDX92408.1	ncoils:Coil	InterPro:Ethylene_insens-like_DNA-bd	GO:GO:0003674	GO:GO:0003700	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00154170001	InterPro:IPR023278	PFAM:PF04873	PANTHER:PTHR33305
PANTHER:PTHR33305:SF1	SUPFAM:SSF116768	UniParc:UPI0004EED5E7	SEG:seg	:	:

Description

BnaA10g14470D

Coordinates

chrLK031872:-:492003..493535

Molecular Weight (calculated)

56786.9 Da

IEP (calculated)

7.312

GRAVY (calculated)

-0.911

Length

499 amino acids

Sequence
(BLAST)

001: MYNTNIGMFP TLVTSPVPRF PEGETCFASP NATCNDPTEE EMEIEELEKK IWKDKQRLKK LKEMSKNGLG RASLKQPPDD EHSRKRMMYQ AQDGILKYMS
101: KTMERCKAKG FVYGVVFENG RTVTGSSDNL RGWWRDQVRF DRNGPAAILK HQREINLSST DGNELGSSED GGDCTAHKLL ELQDTTLGAL LSALMPNCKP
201: PQRRYPLEKG VPPPWWPTGK EDWWGDLPLP DGCRGHPPAY RKPHGLKKMW KVGILIGVIR HMMASDITDI VKLVGRSRTL QEKMTSREGS LWLAALNREK
301: AIAVQSQKQP LTFSEEDGTG GEMDALFPEP ADYEVEGSVG PRHRLNQQFH GFDNNNFNSG YSNKRRFEGE SLHPGTNLTC ENSPCPYSRP EMGFNDRVLR
401: ENHQMTCPYK QPTPFYQPAE PFGMPYPDYN RSFYGNRPES QSIPDYFTQS NNLYRPKAAE RGGNTSVMNH NTNNGYAQTV GMENYHQNQD QDLSMPWIQ

Best Arabidopsis Sequence Match ( AT5G21120.2 )
(BLAST)

001: MTLFADSMDM YNNNIGMFRS LVCSSAPPFT EGHMCSDSHT ALCDDLSSDE EMEIEELEKK IWRDKQRLKR LKEMAKNGLG TRLLLKQQHD DFPEHSSKRT
101: MYKAQDGILK YMSKTMERYK AQGFVYGIVL ENGKTVAGSS DNLREWWKDK VRFDRNGPAA IIKHQRDINL SDGSDSGSEV GDSTAQKLLE LQDTTLGALL
201: SALFPHCNPP QRRFPLEKGV TPPWWPTGKE DWWDQLSLPV DFRGVPPPYK KPHDLKKLWK IGVLIGVIRH MASDISNIPN LVRRSRSLQE KMTSREGALW
301: LAALYREKAI VDQIAMSREN NNTSNFLVPA TGGDPDVLFP ESTDYDVELI GGTHRTNQQY PEFENNYNCV YKRKFEEDFG MPMHPTLLTC ENSLCPYSQP
401: HMGFLDRNLR ENHQMTCPYK VTSFYQPTKP YGMTGLMVPC PDYNGMQQQV QSFQDQFNHP NDLYRPKAPQ RGNDDLVEDL NPSPSTLNQN LGLVLPTDFN
501: GGEETVGTEN NLHNQGQELP TSWIQ

Arabidopsis Description

EIL2ETHYLENE-INSENSITIVE3-like 2 [Source:TAIR;Acc:AT5G21120]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.