CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra020146.1-P	Field mustard	nucleus	100.0	100.0
AT5G21120.2	Thale cress	nucleus	62.11	45.9
CDY59518	Canola	nucleus	60.05	45.78
CDX92408	Canola	nucleus	58.25	45.29
CDY70411	Canola	nucleus	17.01	39.29
CDY46568	Canola	nucleus	16.75	38.69
CDX81161	Canola	nucleus	15.21	30.73
CDY60391	Canola	nucleus	28.61	26.12
CDY19606	Canola	nucleus	30.15	25.43
CDY06379	Canola	nucleus	30.15	24.02
CDY08821	Canola	nucleus	21.91	23.94
CDY38540	Canola	nucleus	32.73	22.56
CDX82228	Canola	nucleus	31.19	22.37
CDY14539	Canola	nucleus	21.39	22.31
CDX83250	Canola	nucleus	32.73	22.28
CDY32390	Canola	nucleus	31.44	22.22
CDY27563	Canola	nucleus	31.19	20.61
CDX78369	Canola	nucleus	17.27	20.36
CDX85778	Canola	nucleus	21.91	18.68
CDY40078	Canola	nucleus	21.65	18.54
CDY11093	Canola	nucleus	23.71	16.28
CDY47740	Canola	nucleus	23.71	15.81
CDX73009	Canola	nucleus	23.45	15.56
CDY60137	Canola	nucleus	23.2	15.33

Protein Annotations

MapMan:11.5.2.4	MapMan:15.5.11	UniProt:A0A078F7T1	EnsemblPlants:CDY09099	ProteinID:CDY09099	ProteinID:CDY09099.1
ncoils:Coil	GO:GO:0003674	GO:GO:0003700	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00001316001	PFAM:PF04873	PANTHER:PTHR33305	PANTHER:PTHR33305:SF1	UniParc:UPI000254341A
SEG:seg	:	:	:	:	:

Description

BnaA02g05250DBnaA02g05250D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F7T1]

Coordinates

chrLK031993:+:95916..97454

Molecular Weight (calculated)

44094.5 Da

IEP (calculated)

6.063

GRAVY (calculated)

-0.847

Length

388 amino acids

Sequence
(BLAST)

001: MFNNNTEMFS GLVSNPERDV GPASLTAVCD DLTNQDIEIE ELERKIWKDK QRLKQLKEMS KNGSGKRLLK HPEDSTKRMM YQAQDGILKY MSKAMERCKA
101: QGFVYGIVFE NGKTVTGSSD NLREWWKDRV RFDRNGPGAI LRHQRQINLS ADGRSLWLAA LNQEKSNVDQ TQYNPLAFSG ESNANALGAS GETDVLFQES
201: GDYNVEAAYG SPQHVPEVAN NFNYVNNKRK FEGELGLSFH QTRNLTCENS YCPYSQPHMG FNDRVLRDSH QMTCPYKTLS YYQPAKPLGM PLSFMTPYQV
301: EMQQQQQQEQ FNLSNTLYRP KAVERGGNND YLSDHRFGLV DNSSPSTSAM NHNPGLVLPV NFNGNEETVG MENNQHNQEG GLPMPWIE

Best Arabidopsis Sequence Match ( AT5G21120.1 )
(BLAST)

001: MDMYNNNIGM FRSLVCSSAP PFTEGHMCSD SHTALCDDLS SDEEMEIEEL EKKIWRDKQR LKRLKEMAKN GLGTRLLLKQ QHDDFPEHSS KRTMYKAQDG
101: ILKYMSKTME RYKAQGFVYG IVLENGKTVA GSSDNLREWW KDKVRFDRNG PAAIIKHQRD INLSDGSDSG SEVGDSTAQK LLELQDTTLG ALLSALFPHC
201: NPPQRRFPLE KGVTPPWWPT GKEDWWDQLS LPVDFRGVPP PYKKPHDLKK LWKIGVLIGV IRHMASDISN IPNLVRRSRS LQEKMTSREG ALWLAALYRE
301: KAIVDQIAMS RENNNTSNFL VPATGGDPDV LFPESTDYDV ELIGGTHRTN QQYPEFENNY NCVYKRKFEE DFGMPMHPTL LTCENSLCPY SQPHMGFLDR
401: NLRENHQMTC PYKVTSFYQP TKPYGMTGLM VPCPDYNGMQ QQVQSFQDQF NHPNDLYRPK APQRGNDDLV EDLNPSPSTL NQNLGLVLPT DFNGGEETVG
501: TENNLHNQGQ ELPTSWIQ

Arabidopsis Description

EIL2ETHYLENE-INSENSITIVE3-like 2 [Source:TAIR;Acc:AT5G21120]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.