Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra001802.1-P | Field mustard | nucleus | 98.71 | 91.91 |
| CDY32390 | Canola | nucleus | 92.98 | 91.62 |
| AT3G20770.1 | Thale cress | nucleus | 87.99 | 75.8 |
| CDY19606 | Canola | nucleus | 64.33 | 75.65 |
| CDY27563 | Canola | nucleus | 81.89 | 75.47 |
| CDY60391 | Canola | nucleus | 57.86 | 73.65 |
| CDY06379 | Canola | nucleus | 65.43 | 72.69 |
| CDY38540 | Canola | nucleus | 70.06 | 67.32 |
| CDX83250 | Canola | nucleus | 70.24 | 66.67 |
| KRG89856 | Soybean | nucleus | 67.84 | 58.81 |
| KRH14682 | Soybean | nucleus | 65.99 | 58.52 |
| KRH18695 | Soybean | nucleus | 67.1 | 58.45 |
| KRH73465 | Soybean | nucleus | 65.99 | 58.14 |
| KRH18696 | Soybean | nucleus | 65.06 | 56.96 |
| PGSC0003DMT400022477 | Potato | nucleus | 63.96 | 56.35 |
| Solyc01g009170.2.1 | Tomato | nucleus | 63.77 | 56.19 |
| Solyc06g073720.1.1 | Tomato | nucleus | 63.03 | 55.9 |
| PGSC0003DMT400015148 | Potato | nucleus | 62.11 | 55.08 |
| Solyc06g073730.1.1 | Tomato | nucleus | 61.55 | 55.04 |
| VIT_06s0009g01380.t01 | Wine grape | nucleus | 61.74 | 54.75 |
| PGSC0003DMT400015145 | Potato | nucleus | 60.26 | 54.42 |
| GSMUA_Achr6P15930_001 | Banana | nucleus | 50.28 | 52.51 |
| GSMUA_Achr10P... | Banana | nucleus | 49.35 | 51.15 |
| TraesCS4A01G129400.1 | Wheat | nucleus | 47.5 | 46.98 |
| GSMUA_Achr3P09440_001 | Banana | nucleus | 45.47 | 46.5 |
| GSMUA_Achr2P11540_001 | Banana | nucleus | 50.83 | 45.53 |
| CDY70411 | Canola | nucleus | 13.86 | 44.64 |
| GSMUA_Achr5P27670_001 | Banana | nucleus | 51.2 | 44.18 |
| GSMUA_Achr9P17080_001 | Banana | nucleus | 50.65 | 44.05 |
| EER94933 | Sorghum | nucleus | 52.31 | 44.01 |
| Zm00001d047563_P001 | Maize | nucleus | 52.13 | 43.93 |
| GSMUA_Achr8P21550_001 | Banana | nucleus | 51.39 | 43.85 |
| CDX81161 | Canola | nucleus | 15.53 | 43.75 |
| Zm00001d028974_P001 | Maize | nucleus | 52.13 | 43.59 |
| GSMUA_Achr11P... | Banana | nucleus | 47.5 | 43.41 |
| Zm00001d022530_P001 | Maize | nucleus | 36.23 | 43.17 |
| TraesCS4B01G175100.1 | Wheat | nucleus | 51.76 | 43.08 |
| TraesCS4D01G177000.1 | Wheat | nucleus | 51.57 | 42.86 |
| HORVU4Hr1G051680.1 | Barley | nucleus | 51.39 | 42.7 |
| Zm00001d007188_P001 | Maize | nucleus | 46.58 | 42.35 |
| CDY46568 | Canola | nucleus | 12.94 | 41.67 |
| OQU90496 | Sorghum | nucleus | 45.47 | 41.41 |
| TraesCS2D01G099400.1 | Wheat | nucleus | 45.84 | 40.0 |
| TraesCS2A01G099900.1 | Wheat | nucleus | 45.66 | 39.97 |
| TraesCS2B01G116900.1 | Wheat | nucleus | 44.92 | 39.26 |
| CDY40078 | Canola | nucleus | 32.35 | 38.63 |
| CDX92408 | Canola | nucleus | 35.49 | 38.48 |
| CDX85778 | Canola | nucleus | 32.35 | 38.46 |
| Os02t0689132-00 | Rice | nucleus | 12.57 | 38.42 |
| CDY59518 | Canola | nucleus | 35.86 | 38.11 |
| CDY47740 | Canola | nucleus | 38.26 | 35.57 |
| CDY60137 | Canola | nucleus | 38.26 | 35.26 |
| CDX73009 | Canola | nucleus | 38.08 | 35.21 |
| CDY11093 | Canola | nucleus | 36.41 | 34.87 |
| CDY09099 | Canola | nucleus | 22.37 | 31.19 |
| CDX78369 | Canola | nucleus | 17.56 | 28.88 |
| CDY08821 | Canola | nucleus | 16.82 | 25.63 |
| CDY14539 | Canola | nucleus | 16.82 | 24.46 |
Protein Annotations
| Gene3D:1.10.3180.10 | MapMan:11.5.2.4 | MapMan:15.5.11 | GO:A0A078D4K6 | EnsemblPlants:CDX82228 | ProteinID:CDX82228 |
| ProteinID:CDX82228.1 | ncoils:Coil | InterPro:Ethylene_insens-like_DNA-bd | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00137324001 | InterPro:IPR023278 | PFAM:PF04873 | PANTHER:PTHR33305 |
| PANTHER:PTHR33305:SF1 | SUPFAM:SSF116768 | UniParc:UPI0004EE13BF | SEG:seg | : | : |
Description
BnaA03g35930D
Coordinates
chrLK031828:+:94494..96719
Molecular Weight (calculated)
61273.9 Da
IEP (calculated)
5.981
GRAVY (calculated)
-0.684
Length
541 amino acids
Sequence
(BLAST)
(BLAST)
001: MMFNEMGLLG GNMDFFGELD FCPPPQPEPV TEDDYTDEEI DVDELERRMW RDKMRLKRLK EHKDKSREGG VDAAKQRQSS QEQARRKKMS RAQDGILKYM
101: LKMMEVCKAQ GFVYGIIPEN GKPVTGASDN LREWWKDKVR FDRNGPAAIS KYQAENSVHG VCEGSGLIGS TPHTLQELQD TTLGSLLSAL MQHCDPPQRR
201: FPLEKGVPPP WWPNGEEEWW CQLGLPKGQG PAPYKKPHDL KKAWKVGVLT AVIKHMFPDV AKIRKLVRQS KCLQDKMTAK ESATWLAIVN QEESLARELY
301: PESCPPSLSG GSCSLLMNDC SQYDVEGVEK ESPYEVEELK PVKEEVPSEF FRKRKPSRDL NTIMVDRAAF TCENPGCVHG DISRGFLDRN SRDNHQLVCP
401: HRDIKPVVGY SQPRQPVNSV AQPIDLTGIG VPEDGQKMIS ELMSMYDRNV HSNQTSMVMK NQSVSLLQPT VQNHQEHLQF QGNVVESTAL NNGSSNRFQL
501: VYDAPPFDMA SFDYRDDMSM AGVVGTMDGV QQKQQDVSIW F
101: LKMMEVCKAQ GFVYGIIPEN GKPVTGASDN LREWWKDKVR FDRNGPAAIS KYQAENSVHG VCEGSGLIGS TPHTLQELQD TTLGSLLSAL MQHCDPPQRR
201: FPLEKGVPPP WWPNGEEEWW CQLGLPKGQG PAPYKKPHDL KKAWKVGVLT AVIKHMFPDV AKIRKLVRQS KCLQDKMTAK ESATWLAIVN QEESLARELY
301: PESCPPSLSG GSCSLLMNDC SQYDVEGVEK ESPYEVEELK PVKEEVPSEF FRKRKPSRDL NTIMVDRAAF TCENPGCVHG DISRGFLDRN SRDNHQLVCP
401: HRDIKPVVGY SQPRQPVNSV AQPIDLTGIG VPEDGQKMIS ELMSMYDRNV HSNQTSMVMK NQSVSLLQPT VQNHQEHLQF QGNVVESTAL NNGSSNRFQL
501: VYDAPPFDMA SFDYRDDMSM AGVVGTMDGV QQKQQDVSIW F
001: MMFNEMGMCG NMDFFSSGSL GEVDFCPVPQ AEPDSIVEDD YTDDEIDVDE LERRMWRDKM RLKRLKEQDK GKEGVDAAKQ RQSQEQARRK KMSRAQDGIL
101: KYMLKMMEVC KAQGFVYGII PENGKPVTGA SDNLREWWKD KVRFDRNGPA AITKYQAENN IPGIHEGNNP IGPTPHTLQE LQDTTLGSLL SALMQHCDPP
201: QRRFPLEKGV PPPWWPNGKE DWWPQLGLPK DQGPAPYKKP HDLKKAWKVG VLTAVIKHMF PDIAKIRKLV RQSKCLQDKM TAKESATWLA IINQEESLAR
301: ELYPESCPPL SLSGGSCSLL MNDCSQYDVE GFEKESHYEV EELKPEKVMN SSNFGMVAKM HDFPVKEEVP AGNSEFMRKR KPNRDLNTIM DRTVFTCENL
401: GCAHSEISRG FLDRNSRDNH QLACPHRDSR LPYGAAPSRF HVNEVKPVVG FPQPRPVNSV AQPIDLTGIV PEDGQKMISE LMSMYDRNVQ SNQTSMVMEN
501: QSVSLLQPTV HNHQEHLQFP GNMVEGSFFE DLNIPNRANN NNSSNNQTFF QGNNNNNNVF KFDTADHNNF EAAHNNNNNS SGNRFQLVFD STPFDMASFD
601: YRDDMSMPGV VGTMDGMQQK QQDVSIWF
101: KYMLKMMEVC KAQGFVYGII PENGKPVTGA SDNLREWWKD KVRFDRNGPA AITKYQAENN IPGIHEGNNP IGPTPHTLQE LQDTTLGSLL SALMQHCDPP
201: QRRFPLEKGV PPPWWPNGKE DWWPQLGLPK DQGPAPYKKP HDLKKAWKVG VLTAVIKHMF PDIAKIRKLV RQSKCLQDKM TAKESATWLA IINQEESLAR
301: ELYPESCPPL SLSGGSCSLL MNDCSQYDVE GFEKESHYEV EELKPEKVMN SSNFGMVAKM HDFPVKEEVP AGNSEFMRKR KPNRDLNTIM DRTVFTCENL
401: GCAHSEISRG FLDRNSRDNH QLACPHRDSR LPYGAAPSRF HVNEVKPVVG FPQPRPVNSV AQPIDLTGIV PEDGQKMISE LMSMYDRNVQ SNQTSMVMEN
501: QSVSLLQPTV HNHQEHLQFP GNMVEGSFFE DLNIPNRANN NNSSNNQTFF QGNNNNNNVF KFDTADHNNF EAAHNNNNNS SGNRFQLVFD STPFDMASFD
601: YRDDMSMPGV VGTMDGMQQK QQDVSIWF
Arabidopsis Description
EIN3Protein ETHYLENE INSENSITIVE 3 [Source:UniProtKB/Swiss-Prot;Acc:O24606]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.