Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G129400.1 | Wheat | nucleus | 82.49 | 98.17 |
| TraesCS4B01G175100.1 | Wheat | nucleus | 97.85 | 98.0 |
| HORVU4Hr1G051680.1 | Barley | nucleus | 96.47 | 96.47 |
| EER94933 | Sorghum | nucleus | 82.18 | 83.2 |
| Os03t0324300-02 | Rice | nucleus | 81.87 | 83.15 |
| Os03t0324200-01 | Rice | nucleus | 81.26 | 82.14 |
| Zm00001d028974_P001 | Maize | nucleus | 81.57 | 82.07 |
| Zm00001d047563_P001 | Maize | nucleus | 79.88 | 81.0 |
| GSMUA_Achr6P15930_001 | Banana | nucleus | 53.76 | 67.57 |
| GSMUA_Achr10P... | Banana | nucleus | 53.3 | 66.48 |
| GSMUA_Achr2P11540_001 | Banana | nucleus | 54.07 | 58.28 |
| GSMUA_Achr5P27670_001 | Banana | nucleus | 55.76 | 57.89 |
| GSMUA_Achr3P09440_001 | Banana | nucleus | 46.08 | 56.71 |
| GSMUA_Achr9P17080_001 | Banana | nucleus | 53.92 | 56.43 |
| GSMUA_Achr8P21550_001 | Banana | nucleus | 54.69 | 56.15 |
| GSMUA_Achr11P... | Banana | nucleus | 50.54 | 55.57 |
| TraesCS2D01G099400.1 | Wheat | nucleus | 50.54 | 53.06 |
| CDX82228 | Canola | nucleus | 42.86 | 51.57 |
| VIT_13s0047g00250.t01 | Wine grape | nucleus | 48.39 | 51.14 |
| CDY32390 | Canola | nucleus | 42.86 | 50.82 |
| Bra001802.1-P | Field mustard | nucleus | 44.7 | 50.09 |
| CDY38540 | Canola | nucleus | 43.01 | 49.73 |
| KRH14682 | Soybean | nucleus | 46.39 | 49.51 |
| CDX83250 | Canola | nucleus | 43.16 | 49.3 |
| AT2G27050.1 | Thale cress | nucleus | 44.09 | 49.14 |
| KRH18695 | Soybean | nucleus | 46.85 | 49.11 |
| Bra000528.1-P | Field mustard | nucleus | 43.01 | 49.04 |
| CDY27563 | Canola | nucleus | 44.09 | 48.89 |
| KRG89856 | Soybean | nucleus | 46.7 | 48.72 |
| KRH73465 | Soybean | nucleus | 45.93 | 48.7 |
| AT3G20770.1 | Thale cress | nucleus | 46.24 | 47.93 |
| KRH18696 | Soybean | nucleus | 45.01 | 47.41 |
| Solyc01g096810.2.1 | Tomato | nucleus | 43.63 | 47.25 |
| PGSC0003DMT400070751 | Potato | nucleus | 43.16 | 46.99 |
| CDY19606 | Canola | nucleus | 29.65 | 41.96 |
| CDY06379 | Canola | nucleus | 31.03 | 41.48 |
| Bra035746.1-P | Field mustard | nucleus | 31.03 | 41.22 |
| CDY60391 | Canola | nucleus | 26.42 | 40.47 |
| Bra023927.1-P | Field mustard | nucleus | 26.73 | 39.28 |
| TraesCS6D01G326600.1 | Wheat | nucleus | 26.27 | 37.34 |
| TraesCS3D01G390000.1 | Wheat | nucleus | 26.11 | 37.12 |
| TraesCS7D01G244600.1 | Wheat | nucleus | 33.64 | 35.67 |
| TraesCS2D01G320800.1 | Wheat | nucleus | 25.35 | 35.48 |
| TraesCS5D01G273600.1 | Wheat | nucleus | 33.33 | 35.46 |
Protein Annotations
| Gene3D:1.10.3180.10 | MapMan:11.5.2.4 | MapMan:15.5.11 | ncoils:Coil | InterPro:Ethylene_insens-like_DNA-bd | GO:GO:0003674 |
| GO:GO:0003700 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR023278 | PFAM:PF04873 |
| PANTHER:PTHR33305 | PANTHER:PTHR33305:SF11 | SUPFAM:SSF116768 | EnsemblPlantsGene:TraesCS4D01G177000 | EnsemblPlants:TraesCS4D01G177000.1 | SEG:seg |
Description
No Description!
Coordinates
chr4D:-:308369736..308371691
Molecular Weight (calculated)
71850.4 Da
IEP (calculated)
4.860
GRAVY (calculated)
-0.703
Length
651 amino acids
Sequence
(BLAST)
(BLAST)
001: MMGGGLLMDQ GMAFSGVHNF VDLLQQNGAD KNLGFGSLMP QTSSGDQCVM GEGDLVDPPT DNFPDAGEDD SDDDVDDIEE LERRMWRDRM KLKRLKELQQ
101: SRGKEQAAAG GGVGDGLKPR QSQEQARRKK MSRAQDGILK YMLKMMEVCR AQGFVYGIIP EKGKPVSGAS DNLRAWWKEK VRFDRNGPAA IAKYQADNAV
201: PGSESELASG TASPHSLQEL QDTTLGSLLS ALMQHCDPPQ RRFPLEKGIS PPWWPSGDEE WWPELGIPKD QGPPPYKKPH DLKKAWKVSV LTAVIKHMSP
301: DIEKIRRLVR QSKCLQDKMT AKEISTWLAV VKQEEELFMR LHPGARPPAS AGGIASAISF NASSSEYDVD LADDCKGDEA GTHKMAMADP TAFNLGAAIL
401: NDKFLMQAPM KEETADMEYV QKRSAVAAEP ELMLNNRVYT CNNVQCPHSD YGYGFLDRNA RSSHQYTCKY NDPLPPSAEN KAAPPAPPQV FPAAYNQQNH
501: GLNNLDFGLP MDGQRSIAEL MNMYDTAFPA TNKNMGNDDV TIIERPNAIT PGAQMDEGFF GQGNGIGGNG DSMFSDVSNM MQQQQQQQAQ QPQQQQAPAQ
601: QQFFIRDDAQ AQFGNQMGSI SGASDFRFGS GFNMSGTVDY PQKNDGPNWY Y
101: SRGKEQAAAG GGVGDGLKPR QSQEQARRKK MSRAQDGILK YMLKMMEVCR AQGFVYGIIP EKGKPVSGAS DNLRAWWKEK VRFDRNGPAA IAKYQADNAV
201: PGSESELASG TASPHSLQEL QDTTLGSLLS ALMQHCDPPQ RRFPLEKGIS PPWWPSGDEE WWPELGIPKD QGPPPYKKPH DLKKAWKVSV LTAVIKHMSP
301: DIEKIRRLVR QSKCLQDKMT AKEISTWLAV VKQEEELFMR LHPGARPPAS AGGIASAISF NASSSEYDVD LADDCKGDEA GTHKMAMADP TAFNLGAAIL
401: NDKFLMQAPM KEETADMEYV QKRSAVAAEP ELMLNNRVYT CNNVQCPHSD YGYGFLDRNA RSSHQYTCKY NDPLPPSAEN KAAPPAPPQV FPAAYNQQNH
501: GLNNLDFGLP MDGQRSIAEL MNMYDTAFPA TNKNMGNDDV TIIERPNAIT PGAQMDEGFF GQGNGIGGNG DSMFSDVSNM MQQQQQQQAQ QPQQQQAPAQ
601: QQFFIRDDAQ AQFGNQMGSI SGASDFRFGS GFNMSGTVDY PQKNDGPNWY Y
001: MMMFNEMGMY GNMDFFSSST SLDVCPLPQA EQEPVVEDVD YTDDEMDVDE LEKRMWRDKM RLKRLKEQQS KCKEGVDGSK QRQSQEQARR KKMSRAQDGI
101: LKYMLKMMEV CKAQGFVYGI IPEKGKPVTG ASDNLREWWK DKVRFDRNGP AAIAKYQSEN NISGGSNDCN SLVGPTPHTL QELQDTTLGS LLSALMQHCD
201: PPQRRFPLEK GVSPPWWPNG NEEWWPQLGL PNEQGPPPYK KPHDLKKAWK VGVLTAVIKH MSPDIAKIRK LVRQSKCLQD KMTAKESATW LAIINQEEVV
301: ARELYPESCP PLSSSSSLGS GSLLINDCSE YDVEGFEKEQ HGFDVEERKP EIVMMHPLAS FGVAKMQHFP IKEEVATTVN LEFTRKRKQN NDMNVMVMDR
401: SAGYTCENGQ CPHSKMNLGF QDRSSRDNHQ MVCPYRDNRL AYGASKFHMG GMKLVVPQQP VQPIDLSGVG VPENGQKMIT ELMAMYDRNV QSNQTPPTLM
501: ENQSMVIDAK AAQNQQLNFN SGNQMFMQQG TNNGVNNRFQ MVFDSTPFDM AAFDYRDDWQ TGAMEGMGKQ QQQQQQQQDV SIWF
101: LKYMLKMMEV CKAQGFVYGI IPEKGKPVTG ASDNLREWWK DKVRFDRNGP AAIAKYQSEN NISGGSNDCN SLVGPTPHTL QELQDTTLGS LLSALMQHCD
201: PPQRRFPLEK GVSPPWWPNG NEEWWPQLGL PNEQGPPPYK KPHDLKKAWK VGVLTAVIKH MSPDIAKIRK LVRQSKCLQD KMTAKESATW LAIINQEEVV
301: ARELYPESCP PLSSSSSLGS GSLLINDCSE YDVEGFEKEQ HGFDVEERKP EIVMMHPLAS FGVAKMQHFP IKEEVATTVN LEFTRKRKQN NDMNVMVMDR
401: SAGYTCENGQ CPHSKMNLGF QDRSSRDNHQ MVCPYRDNRL AYGASKFHMG GMKLVVPQQP VQPIDLSGVG VPENGQKMIT ELMAMYDRNV QSNQTPPTLM
501: ENQSMVIDAK AAQNQQLNFN SGNQMFMQQG TNNGVNNRFQ MVFDSTPFDM AAFDYRDDWQ TGAMEGMGKQ QQQQQQQQDV SIWF
Arabidopsis Description
EIL1ETHYLENE INSENSITIVE 3-like 1 protein [Source:UniProtKB/Swiss-Prot;Acc:Q9SLH0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.