Factsheet for GSMUA_Achr8P21550_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr2P15920_001
GSMUA_Achr4P30680_001
GSMUA_Achr6P05220_001
GSMUA_Achr9P28510_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G27050.1	GSMUA_Achr10P...	AT2G25490.1	14675533
AT2G27050.1	GSMUA_Achr2P15920_001	AT2G25490.1	14675533
AT2G27050.1	GSMUA_Achr4P30680_001	AT2G25490.1	14675533
AT2G27050.1	GSMUA_Achr6P05220_001	AT2G25490.1	14675533
AT2G27050.1	GSMUA_Achr9P28510_001	AT2G25490.1	14675533
AT2G27050.1	GSMUA_Achr10P...	AT5G25350.1	14675533
AT2G27050.1	GSMUA_Achr2P15920_001	AT5G25350.1	14675533
AT2G27050.1	GSMUA_Achr4P30680_001	AT5G25350.1	14675533
AT2G27050.1	GSMUA_Achr6P05220_001	AT5G25350.1	14675533
AT2G27050.1	GSMUA_Achr9P28510_001	AT5G25350.1	14675533
AT3G20770.1	GSMUA_Achr10P...	AT2G25490.1	14675532
AT3G20770.1	GSMUA_Achr2P15920_001	AT2G25490.1	14675532
AT3G20770.1	GSMUA_Achr4P30680_001	AT2G25490.1	14675532
AT3G20770.1	GSMUA_Achr6P05220_001	AT2G25490.1	14675532
AT3G20770.1	GSMUA_Achr9P28510_001	AT2G25490.1	14675532
AT3G20770.1	GSMUA_Achr10P...	AT2G25490.1	14675533
AT3G20770.1	GSMUA_Achr2P15920_001	AT2G25490.1	14675533
AT3G20770.1	GSMUA_Achr4P30680_001	AT2G25490.1	14675533
AT3G20770.1	GSMUA_Achr6P05220_001	AT2G25490.1	14675533
AT3G20770.1	GSMUA_Achr9P28510_001	AT2G25490.1	14675533
AT3G20770.1	GSMUA_Achr10P...	AT5G25350.1	14675532
AT3G20770.1	GSMUA_Achr2P15920_001	AT5G25350.1	14675532
AT3G20770.1	GSMUA_Achr4P30680_001	AT5G25350.1	14675532
AT3G20770.1	GSMUA_Achr6P05220_001	AT5G25350.1	14675532
AT3G20770.1	GSMUA_Achr9P28510_001	AT5G25350.1	14675532
AT3G20770.1	GSMUA_Achr10P...	AT5G25350.1	14675533
AT3G20770.1	GSMUA_Achr2P15920_001	AT5G25350.1	14675533
AT3G20770.1	GSMUA_Achr4P30680_001	AT5G25350.1	14675533
AT3G20770.1	GSMUA_Achr6P05220_001	AT5G25350.1	14675533
AT3G20770.1	GSMUA_Achr9P28510_001	AT5G25350.1	14675533

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P15930_001	Banana	nucleus	60.41	73.94
GSMUA_Achr10P...	Banana	nucleus	60.25	73.18
GSMUA_Achr9P17080_001	Banana	nucleus	69.4	70.74
GSMUA_Achr3P09440_001	Banana	nucleus	57.41	68.81
GSMUA_Achr2P11540_001	Banana	nucleus	62.3	65.4
GSMUA_Achr5P27670_001	Banana	nucleus	63.56	64.27
TraesCS4A01G129400.1	Wheat	nucleus	50.95	59.05
GSMUA_Achr11P...	Banana	nucleus	54.57	58.45
Os03t0324300-02	Rice	nucleus	57.73	57.1
Os03t0324200-01	Rice	nucleus	57.41	56.52
EER94933	Sorghum	nucleus	55.99	55.21
TraesCS4D01G177000.1	Wheat	nucleus	56.15	54.69
Zm00001d047563_P001	Maize	nucleus	55.2	54.52
TraesCS4B01G175100.1	Wheat	nucleus	55.84	54.46
HORVU4Hr1G051680.1	Barley	nucleus	55.84	54.38
Zm00001d028974_P001	Maize	nucleus	55.36	54.25
VIT_13s0047g00250.t01	Wine grape	nucleus	51.26	52.76
Os07t0685700-01	Rice	mitochondrion, nucleus	48.58	51.94
CDX82228	Canola	nucleus	43.85	51.39
KRH14682	Soybean	nucleus	49.21	51.15
KRH18695	Soybean	nucleus	49.84	50.89
CDY32390	Canola	nucleus	44.01	50.82
KRH73465	Soybean	nucleus	49.05	50.65
KRG89856	Soybean	nucleus	49.84	50.64
Zm00001d022530_P001	Maize	nucleus	35.96	50.22
CDX83250	Canola	nucleus	45.11	50.18
Bra000528.1-P	Field mustard	nucleus	45.11	50.09
CDY27563	Canola	nucleus	46.37	50.09
CDY38540	Canola	nucleus	44.32	49.91
OQU90496	Sorghum	nucleus	46.69	49.83
Zm00001d007188_P001	Maize	nucleus	46.53	49.58
Bra001802.1-P	Field mustard	nucleus	45.11	49.23
AT2G27050.1	Thale cress	nucleus	45.11	48.97
KRH18696	Soybean	nucleus	46.53	47.73
Solyc01g096810.2.1	Tomato	nucleus	44.8	47.25
TraesCS2A01G099900.1	Wheat	nucleus	46.06	47.25
TraesCS2D01G099400.1	Wheat	nucleus	45.9	46.94
TraesCS2B01G116900.1	Wheat	nucleus	45.74	46.85
AT3G20770.1	Thale cress	nucleus	46.21	46.66
PGSC0003DMT400070751	Potato	nucleus	43.85	46.49
GSMUA_Achr10P...	Banana	nucleus	23.97	45.1
CDY60391	Canola	nucleus	27.76	41.41
CDY19606	Canola	nucleus	29.97	41.3
CDY06379	Canola	nucleus	31.55	41.07
Bra023927.1-P	Field mustard	nucleus	28.39	40.63
Bra035746.1-P	Field mustard	nucleus	30.76	39.8
GSMUA_Achr7P21630_001	Banana	nucleus	37.22	36.03
GSMUA_Achr3P11160_001	Banana	nucleus	32.18	35.73
GSMUA_AchrUn_...	Banana	nucleus	24.13	35.25
GSMUA_Achr9P27680_001	Banana	nucleus	32.97	34.26
GSMUA_Achr8P17130_001	Banana	nucleus	29.18	33.82
GSMUA_Achr6P23310_001	Banana	nucleus	29.02	33.39
GSMUA_Achr8P25580_001	Banana	nucleus	32.33	33.28

Protein Annotations

Gene3D:1.10.3180.10	MapMan:11.5.2.4	MapMan:15.5.11	ncoils:Coil	InterPro:Ethylene_insens-like_DNA-bd	GO:GO:0003674
GO:GO:0003700	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr8G21550_001
EnsemblPlants:GSMUA_Achr8P21550_001	EnsemblPlants:GSMUA_Achr8T21550_001	InterPro:IPR023278	UniProt:M0TSF8	PFAM:PF04873	PANTHER:PTHR33305
PANTHER:PTHR33305:SF1	SUPFAM:SSF116768	UniParc:UPI00029482A4	SEG:seg	:	:

Description

Putative Protein ETHYLENE INSENSITIVE 3 [Source:GMGC_GENE;Acc:GSMUA_Achr8G21550_001]

Coordinates

chr8:-:26409122..26411360

Molecular Weight (calculated)

71359.0 Da

IEP (calculated)

5.826

GRAVY (calculated)

-0.777

Length

634 amino acids

Sequence
(BLAST)

001: MGGLLMEGTV NSGCPNYKQI FSSDEKSFCC GSTHPPSMGE RTGEKYLSEP PQENFSDAAD EESDEDVDIE ELERRMWRDR MRLKRLKEQQ QNKNKEQVDS
101: AKQRQSQEQA RRKTMSRAQD GILKYMLKMM EVCNAQGFVY GIIPEKGKPV SGASDNFRGW WKEKVRFDRN GPAAIAKYQA DTAILGSSSE TNSATAGLHS
201: LQELQDTTLG SLLSALMQHC NPPQRRFPLE KGVAPPWWPT GREEWWLQLE IPKDQGPPPY KKPHDLKKAW KVSVLTAVIK HMSPDIEKIR KLVRQSKGLQ
301: DKMTAKESTT WLAVIKQEED FYMKMHPDAC FPPSSGSGNT GATSLGSSCI EYDVEGVDDG ESMDTVNHKS HAEVNAFDLG STAKNEKTVI TASVKEETKM
401: EFIQKRGAAE PESMQNQRIY TCGNVQCPHS DFRHGFLDRN ARNSHQYLCK YQNTIPQGIG SAISGPKMKG NKPPIFSLPF NTQLDPTSLG SGLNSVDISD
501: VGVPYDGQKS INELMSFYDN NVNANKNLNM GGIGMSKMMN SVQPRIQMED NFPQGTRLGG NVFEEVDNLV QQQQQFLFHE DIMPFEQQFG DQPNGLSGDF
601: SFCPFNMHSM NYSDTLQREM GDPLQKSESL NWFY

Best Arabidopsis Sequence Match ( AT3G20770.1 )
(BLAST)

001: MMFNEMGMCG NMDFFSSGSL GEVDFCPVPQ AEPDSIVEDD YTDDEIDVDE LERRMWRDKM RLKRLKEQDK GKEGVDAAKQ RQSQEQARRK KMSRAQDGIL
101: KYMLKMMEVC KAQGFVYGII PENGKPVTGA SDNLREWWKD KVRFDRNGPA AITKYQAENN IPGIHEGNNP IGPTPHTLQE LQDTTLGSLL SALMQHCDPP
201: QRRFPLEKGV PPPWWPNGKE DWWPQLGLPK DQGPAPYKKP HDLKKAWKVG VLTAVIKHMF PDIAKIRKLV RQSKCLQDKM TAKESATWLA IINQEESLAR
301: ELYPESCPPL SLSGGSCSLL MNDCSQYDVE GFEKESHYEV EELKPEKVMN SSNFGMVAKM HDFPVKEEVP AGNSEFMRKR KPNRDLNTIM DRTVFTCENL
401: GCAHSEISRG FLDRNSRDNH QLACPHRDSR LPYGAAPSRF HVNEVKPVVG FPQPRPVNSV AQPIDLTGIV PEDGQKMISE LMSMYDRNVQ SNQTSMVMEN
501: QSVSLLQPTV HNHQEHLQFP GNMVEGSFFE DLNIPNRANN NNSSNNQTFF QGNNNNNNVF KFDTADHNNF EAAHNNNNNS SGNRFQLVFD STPFDMASFD
601: YRDDMSMPGV VGTMDGMQQK QQDVSIWF

Arabidopsis Description

EIN3Protein ETHYLENE INSENSITIVE 3 [Source:UniProtKB/Swiss-Prot;Acc:O24606]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.