Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_AchrUn_... | Banana | nucleus | 64.07 | 81.34 |
| GSMUA_Achr8P17130_001 | Banana | nucleus | 79.49 | 80.07 |
| GSMUA_Achr6P15930_001 | Banana | nucleus | 35.21 | 37.45 |
| GSMUA_Achr10P... | Banana | nucleus | 22.14 | 36.2 |
| GSMUA_Achr10P... | Banana | nucleus | 33.94 | 35.82 |
| GSMUA_Achr3P09440_001 | Banana | nucleus | 31.76 | 33.08 |
| GSMUA_Achr2P11540_001 | Banana | nucleus | 34.3 | 31.29 |
| GSMUA_Achr5P27670_001 | Banana | nucleus | 34.48 | 30.3 |
| GSMUA_Achr11P... | Banana | nucleus | 31.76 | 29.56 |
| GSMUA_Achr9P17080_001 | Banana | nucleus | 33.03 | 29.26 |
| GSMUA_Achr8P21550_001 | Banana | nucleus | 33.39 | 29.02 |
| GSMUA_Achr3P11160_001 | Banana | nucleus | 28.13 | 27.15 |
| GSMUA_Achr7P21630_001 | Banana | nucleus | 31.94 | 26.87 |
| GSMUA_Achr9P27680_001 | Banana | nucleus | 29.4 | 26.56 |
| GSMUA_Achr8P25580_001 | Banana | nucleus | 28.31 | 25.32 |
Protein Annotations
| Gene3D:1.10.3180.10 | MapMan:11.5.2.4 | MapMan:15.5.11 | ncoils:Coil | InterPro:Ethylene_insens-like_DNA-bd | GO:GO:0003674 |
| GO:GO:0003700 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr6G23310_001 |
| EnsemblPlants:GSMUA_Achr6P23310_001 | EnsemblPlants:GSMUA_Achr6T23310_001 | InterPro:IPR023278 | UniProt:M0T9H9 | PFAM:PF04873 | PANTHER:PTHR33305 |
| PANTHER:PTHR33305:SF1 | SUPFAM:SSF116768 | UniParc:UPI000294C6F7 | SEG:seg | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr6G23310_001]
Coordinates
chr6:-:23408652..23410307
Molecular Weight (calculated)
62210.6 Da
IEP (calculated)
4.951
GRAVY (calculated)
-0.638
Length
551 amino acids
Sequence
(BLAST)
(BLAST)
001: MQDKKSKQNV GCSERTDNCS PSVLESIVDP SSELEGLLGP PPDNMFDTRL SDGVETDAHE VERLRIRIWL DIIRLKHLNE HHKCKIIQQS SASLLDYSQE
101: QSRRKKLAQN QEKIMNEMRE LAEEGLAQGF VYGIVPYKGK PVSGASNNLL KWWKEIVRFR QNGPAAIREY QTDSSTHFVG KENPSEFSVP GSLQELQDTT
201: LGSLLSALMP YCDPPQRRFP LEKGIPPPWW PNMSEEWWRE MGMPKDPSPP PYKKPHDLKK AWKVSVLIAI IKHLMPDIEK IQRLIEKSKG LQDKITAKEV
301: DIMNAILKHE LNKYFGLQHN APPPPSMERK SYGETMGDAS SISGIVEQPI SEAMQEESMN VTQYLAMDVN MFTRRNLPNY ELGPQDQPRG SIHQDNLGHI
401: RHSVASASHG NQPLANPYGS YLPMVADNPD LPSGGIEMSR QGTSSSGMNL FQTRLNQDQT LIPEAMEVEI DPLFPSSAQE DAMGTSITRE LANLVQSQIF
501: PSDETVLFES IFENDLDIGS ASCFSIMDRS SRLPDSFHEL DEYDWSKDFG N
101: QSRRKKLAQN QEKIMNEMRE LAEEGLAQGF VYGIVPYKGK PVSGASNNLL KWWKEIVRFR QNGPAAIREY QTDSSTHFVG KENPSEFSVP GSLQELQDTT
201: LGSLLSALMP YCDPPQRRFP LEKGIPPPWW PNMSEEWWRE MGMPKDPSPP PYKKPHDLKK AWKVSVLIAI IKHLMPDIEK IQRLIEKSKG LQDKITAKEV
301: DIMNAILKHE LNKYFGLQHN APPPPSMERK SYGETMGDAS SISGIVEQPI SEAMQEESMN VTQYLAMDVN MFTRRNLPNY ELGPQDQPRG SIHQDNLGHI
401: RHSVASASHG NQPLANPYGS YLPMVADNPD LPSGGIEMSR QGTSSSGMNL FQTRLNQDQT LIPEAMEVEI DPLFPSSAQE DAMGTSITRE LANLVQSQIF
501: PSDETVLFES IFENDLDIGS ASCFSIMDRS SRLPDSFHEL DEYDWSKDFG N
001: MGDLAMSVAD IRMENEPDDL ASDNVAEIDV SDEEIDADDL ERRMWKDRVR LKRIKERQKA GSQGAQTKET PKKISDQAQR KKMSRAQDGI LKYMLKLMEV
101: CKVRGFVYGI IPEKGKPVSG SSDNIRAWWK EKVKFDKNGP AAIAKYEEEC LAFGKSDGNR NSQFVLQDLQ DATLGSLLSS LMQHCDPPQR KYPLEKGTPP
201: PWWPTGNEEW WVKLGLPKSQ SPPYRKPHDL KKMWKVGVLT AVINHMLPDI AKIKRHVRQS KCLQDKMTAK ESAIWLAVLN QEESLIQQPS SDNGNSNVTE
301: THRRGNNADR RKPVVNSDSD YDVDGTEEAS GSVSSKDSRR NQIQKEQPTA ISHSVRDQDK AEKHRRRKRP RIRSGTVNRQ EEEQPEAQQR NILPDMNHVD
401: APLLEYNING THQEDDVVDP NIALGPEDNG LELVVPEFNN NYTYLPLVNE QTMMPVDERP MLYGPNPNQE LQFGSGYNFY NPSAVFVHNQ EDDILHTQIE
501: MNTQAPPHNS GFEEAPGGVL QPLGLLGNED GVTGSELPQY QSGILSPLTD LDFDYGGFGD DFSWFGA
101: CKVRGFVYGI IPEKGKPVSG SSDNIRAWWK EKVKFDKNGP AAIAKYEEEC LAFGKSDGNR NSQFVLQDLQ DATLGSLLSS LMQHCDPPQR KYPLEKGTPP
201: PWWPTGNEEW WVKLGLPKSQ SPPYRKPHDL KKMWKVGVLT AVINHMLPDI AKIKRHVRQS KCLQDKMTAK ESAIWLAVLN QEESLIQQPS SDNGNSNVTE
301: THRRGNNADR RKPVVNSDSD YDVDGTEEAS GSVSSKDSRR NQIQKEQPTA ISHSVRDQDK AEKHRRRKRP RIRSGTVNRQ EEEQPEAQQR NILPDMNHVD
401: APLLEYNING THQEDDVVDP NIALGPEDNG LELVVPEFNN NYTYLPLVNE QTMMPVDERP MLYGPNPNQE LQFGSGYNFY NPSAVFVHNQ EDDILHTQIE
501: MNTQAPPHNS GFEEAPGGVL QPLGLLGNED GVTGSELPQY QSGILSPLTD LDFDYGGFGD DFSWFGA
Arabidopsis Description
EIL3SLIM1 [Source:UniProtKB/TrEMBL;Acc:A0A178VZZ3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.