Factsheet for GSMUA_Achr11P25120_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
nucleus 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr2P15920_001
GSMUA_Achr4P30680_001
GSMUA_Achr6P05220_001
GSMUA_Achr9P28510_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G27050.1	GSMUA_Achr10P...	AT2G25490.1	14675533
AT2G27050.1	GSMUA_Achr2P15920_001	AT2G25490.1	14675533
AT2G27050.1	GSMUA_Achr4P30680_001	AT2G25490.1	14675533
AT2G27050.1	GSMUA_Achr6P05220_001	AT2G25490.1	14675533
AT2G27050.1	GSMUA_Achr9P28510_001	AT2G25490.1	14675533
AT2G27050.1	GSMUA_Achr10P...	AT5G25350.1	14675533
AT2G27050.1	GSMUA_Achr2P15920_001	AT5G25350.1	14675533
AT2G27050.1	GSMUA_Achr4P30680_001	AT5G25350.1	14675533
AT2G27050.1	GSMUA_Achr6P05220_001	AT5G25350.1	14675533
AT2G27050.1	GSMUA_Achr9P28510_001	AT5G25350.1	14675533
AT3G20770.1	GSMUA_Achr10P...	AT2G25490.1	14675532
AT3G20770.1	GSMUA_Achr2P15920_001	AT2G25490.1	14675532
AT3G20770.1	GSMUA_Achr4P30680_001	AT2G25490.1	14675532
AT3G20770.1	GSMUA_Achr6P05220_001	AT2G25490.1	14675532
AT3G20770.1	GSMUA_Achr9P28510_001	AT2G25490.1	14675532
AT3G20770.1	GSMUA_Achr10P...	AT2G25490.1	14675533
AT3G20770.1	GSMUA_Achr2P15920_001	AT2G25490.1	14675533
AT3G20770.1	GSMUA_Achr4P30680_001	AT2G25490.1	14675533
AT3G20770.1	GSMUA_Achr6P05220_001	AT2G25490.1	14675533
AT3G20770.1	GSMUA_Achr9P28510_001	AT2G25490.1	14675533
AT3G20770.1	GSMUA_Achr10P...	AT5G25350.1	14675532
AT3G20770.1	GSMUA_Achr2P15920_001	AT5G25350.1	14675532
AT3G20770.1	GSMUA_Achr4P30680_001	AT5G25350.1	14675532
AT3G20770.1	GSMUA_Achr6P05220_001	AT5G25350.1	14675532
AT3G20770.1	GSMUA_Achr9P28510_001	AT5G25350.1	14675532
AT3G20770.1	GSMUA_Achr10P...	AT5G25350.1	14675533
AT3G20770.1	GSMUA_Achr2P15920_001	AT5G25350.1	14675533
AT3G20770.1	GSMUA_Achr4P30680_001	AT5G25350.1	14675533
AT3G20770.1	GSMUA_Achr6P05220_001	AT5G25350.1	14675533
AT3G20770.1	GSMUA_Achr9P28510_001	AT5G25350.1	14675533

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	nucleus	58.61	66.48
GSMUA_Achr6P15930_001	Banana	nucleus	57.77	66.02
GSMUA_Achr5P27670_001	Banana	nucleus	68.92	65.07
GSMUA_Achr2P11540_001	Banana	nucleus	65.88	64.57
GSMUA_Achr9P17080_001	Banana	nucleus	58.95	56.11
GSMUA_Achr3P09440_001	Banana	nucleus	50.0	55.95
TraesCS4A01G129400.1	Wheat	nucleus	50.84	55.03
GSMUA_Achr8P21550_001	Banana	nucleus	58.45	54.57
Os03t0324300-02	Rice	nucleus	55.91	51.64
Os03t0324200-01	Rice	nucleus	56.08	51.55
HORVU4Hr1G051680.1	Barley	nucleus	56.25	51.15
EER94933	Sorghum	nucleus	55.24	50.86
TraesCS4D01G177000.1	Wheat	nucleus	55.57	50.54
TraesCS4B01G175100.1	Wheat	nucleus	55.41	50.46
Zm00001d047563_P001	Maize	nucleus	54.05	49.84
Zm00001d028974_P001	Maize	nucleus	54.39	49.77
Os07t0685700-01	Rice	mitochondrion, nucleus	48.99	48.9
VIT_13s0047g00250.t01	Wine grape	nucleus	50.0	48.05
CDY32390	Canola	nucleus	44.09	47.54
CDX82228	Canola	nucleus	43.41	47.5
CDY38540	Canola	nucleus	45.1	47.42
CDX83250	Canola	nucleus	45.44	47.19
Bra000528.1-P	Field mustard	nucleus	45.44	47.11
KRH18695	Soybean	nucleus	49.32	47.02
OQU90496	Sorghum	nucleus	47.13	46.97
AT2G27050.1	Thale cress	nucleus	46.11	46.75
KRH14682	Soybean	nucleus	47.97	46.56
KRG89856	Soybean	nucleus	48.82	46.31
KRH73465	Soybean	nucleus	47.97	46.25
Zm00001d022530_P001	Maize	nucleus	35.14	45.81
Bra001802.1-P	Field mustard	nucleus	44.59	45.44
Zm00001d007188_P001	Maize	nucleus	45.44	45.21
CDY27563	Canola	nucleus	44.09	44.46
KRH18696	Soybean	nucleus	46.28	44.34
AT3G20770.1	Thale cress	nucleus	46.28	43.63
TraesCS2A01G099900.1	Wheat	nucleus	45.44	43.53
Solyc01g096810.2.1	Tomato	nucleus	44.09	43.43
TraesCS2D01G099400.1	Wheat	nucleus	45.44	43.39
TraesCS2B01G116900.1	Wheat	nucleus	45.1	43.13
PGSC0003DMT400070751	Potato	nucleus	43.24	42.81
GSMUA_Achr10P...	Banana	nucleus	23.82	41.84
CDY06379	Canola	nucleus	32.09	39.01
CDY19606	Canola	nucleus	30.24	38.91
Bra035746.1-P	Field mustard	nucleus	31.08	37.55
CDY60391	Canola	nucleus	26.86	37.41
Bra023927.1-P	Field mustard	nucleus	27.36	36.57
GSMUA_Achr3P11160_001	Banana	nucleus	33.61	34.85
GSMUA_Achr7P21630_001	Banana	nucleus	36.82	33.28
GSMUA_AchrUn_...	Banana	nucleus	24.32	33.18
GSMUA_Achr9P27680_001	Banana	nucleus	33.45	32.46
GSMUA_Achr8P17130_001	Banana	nucleus	29.9	32.36
GSMUA_Achr8P25580_001	Banana	nucleus	33.61	32.31
GSMUA_Achr6P23310_001	Banana	nucleus	29.56	31.76

Protein Annotations

Gene3D:1.10.3180.10	MapMan:11.5.2.4	MapMan:15.5.11	ncoils:Coil	InterPro:Ethylene_insens-like_DNA-bd	GO:GO:0003674
GO:GO:0003700	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr11G25120_001
EnsemblPlants:GSMUA_Achr11P25120_001	EnsemblPlants:GSMUA_Achr11T25120_001	InterPro:IPR023278	UniProt:M0RV92	PFAM:PF04873	PANTHER:PTHR33305
PANTHER:PTHR33305:SF1	SUPFAM:SSF116768	UniParc:UPI000295FCE5	SEG:seg	:	:

Description

ethylene-insensitive 3, putative [Source:GMGC_GENE;Acc:GSMUA_Achr11G25120_001]

Coordinates

chr11:-:24349353..24351365

Molecular Weight (calculated)

66243.0 Da

IEP (calculated)

7.300

GRAVY (calculated)

-0.596

Length

592 amino acids

Sequence
(BLAST)

001: MMGVLLVEDM VYPGGSNYVQ GERNVGYGGF HQVSAGEHIT GEGDPVDLPP EQFAEAGDED TNDDIDIEEL ELRMWRDQLR LKRLKEKQQS KNKVQTDAAR
101: QQSQKQACRK KMSRAQDGIL KYMLKMMEVC KAQGFVYGII PEKGKPVSGA SDNLRGWWKD KVRFDQNGPA AIAKYQVDNA IPGSNSDVNA ETLGPHSLME
201: LQDTTLGSLL SALMQHCDPP QRRFPLEKGI PPPWWPTGRE EWWRKLDIPK EHGLPPYKKP HDLKKSWKVA VLMVVIKHMS SDIERIRRLV RQSRCLQDKM
301: TAKESTTWLA VIKQEEVMYM KLHTDACAPQ SAGRGVSGAI SFDNNSSEYD HTGIYKVKGE GVANYKLALA ANAFNLRACT GDVMPIRSAP MKGEKDVGFI
401: QKRTSRESEL MMNQRIYTCD NALCPHNNFR NGFLDRNARN SHRYVCKYQN TLLPTGIGMM SNGLQVPGNK PSVNPVNISE LGIPSDGQKL INELTNFYDI
501: SINASKNSSS GDVTMLEGSK SLQMEDSFFD RSLFEEVSGV VERSLPIEQE PSGQPIEASG GIRIRSGFNM LGMDYSDALH GGTKQDGFSW FC

Best Arabidopsis Sequence Match ( AT5G21120.3 )
(BLAST)

001: MDMYNNNIGM FRSLVCSSAP PFTEGHMCSD SHTALCDDLS SDEEMEIEEL EKKIWRDKQR LKRLKEMAKN GLGTRLLLKQ QHDDFPEHSS KRTMYKAQDG
101: ILKYMSKTME RYKAQGFVYG IVLENGKTVA GSSDNLREWW KDKVRFDRNG PAAIIKHQRD INLSDGSDSG SEVGDSTAQK LLELQDTTLG ALLSALFPHC
201: NPPQRRFPLE KGVTPPWWPT GKEDWWDQLS LPVDFRGVPP PYKKPHDLKK LWKIGVLIGV IRHMASDISN IPNLVRRSRS LQEKMTSREG ALWLAALYRE
301: KAIVDQIAMS RENNNTSNFL VPATGGDPDV LFPESTDYDV ELIGGTHRTN QQYPEFENNY NCVYKRKFEE DFGMPMHPTL LTCENSLCPY SQPHMGFLDR
401: NLRENHQMTC PYKVTSFYQP TKPYGMTGLM VPCPDYNGMQ QQVQSFQDQF NHPNDLYRPK APQRGNDDLV EDLNPSPSTL NQNLGLVLPT DFNGGEETVG
501: TENNLHNQGQ ELPTSWIQ

Arabidopsis Description

EIL2ETHYLENE-INSENSITIVE3-like 2 [Source:TAIR;Acc:AT5G21120]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.