Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G099400.1 | Wheat | nucleus | 93.38 | 93.23 |
| TraesCS2A01G099900.1 | Wheat | nucleus | 92.41 | 92.56 |
| Os07t0685700-01 | Rice | mitochondrion, nucleus | 65.91 | 68.8 |
| Zm00001d022530_P001 | Maize | nucleus | 42.65 | 58.15 |
| OQU90496 | Sorghum | nucleus | 55.41 | 57.74 |
| Zm00001d007188_P001 | Maize | nucleus | 54.28 | 56.47 |
| GSMUA_Achr6P15930_001 | Banana | nucleus | 47.01 | 56.18 |
| GSMUA_Achr10P... | Banana | nucleus | 45.4 | 53.83 |
| TraesCS4B01G175100.1 | Wheat | nucleus | 52.67 | 50.15 |
| GSMUA_Achr3P09440_001 | Banana | nucleus | 42.49 | 49.72 |
| GSMUA_Achr2P11540_001 | Banana | nucleus | 45.88 | 47.02 |
| GSMUA_Achr8P21550_001 | Banana | nucleus | 46.85 | 45.74 |
| GSMUA_Achr9P17080_001 | Banana | nucleus | 45.88 | 45.66 |
| GSMUA_Achr5P27670_001 | Banana | nucleus | 46.2 | 45.61 |
| GSMUA_Achr11P... | Banana | nucleus | 43.13 | 45.1 |
| CDX82228 | Canola | nucleus | 39.26 | 44.92 |
| CDY32390 | Canola | nucleus | 39.58 | 44.63 |
| CDY38540 | Canola | nucleus | 40.55 | 44.58 |
| CDX83250 | Canola | nucleus | 40.71 | 44.21 |
| Bra000528.1-P | Field mustard | nucleus | 40.71 | 44.13 |
| CDY27563 | Canola | nucleus | 41.52 | 43.78 |
| VIT_13s0047g00250.t01 | Wine grape | nucleus | 43.46 | 43.67 |
| AT2G27050.1 | Thale cress | nucleus | 41.2 | 43.66 |
| KRH14682 | Soybean | nucleus | 42.97 | 43.61 |
| KRH73465 | Soybean | nucleus | 42.49 | 42.83 |
| KRH18695 | Soybean | nucleus | 42.49 | 42.35 |
| Bra001802.1-P | Field mustard | nucleus | 39.74 | 42.34 |
| KRG89856 | Soybean | nucleus | 42.16 | 41.83 |
| KRH18696 | Soybean | nucleus | 41.2 | 41.26 |
| AT3G20770.1 | Thale cress | nucleus | 41.52 | 40.92 |
| Solyc01g096810.2.1 | Tomato | nucleus | 38.77 | 39.93 |
| PGSC0003DMT400070751 | Potato | nucleus | 38.45 | 39.8 |
| TraesCS3B01G428000.1 | Wheat | nucleus | 25.2 | 35.7 |
| TraesCS6B01G376700.1 | Wheat | nucleus | 26.01 | 35.15 |
| CDY60391 | Canola | nucleus | 23.91 | 34.82 |
| TraesCS2B01G340200.1 | Wheat | nucleus | 26.17 | 34.76 |
| CDY19606 | Canola | nucleus | 25.69 | 34.57 |
| CDY06379 | Canola | nucleus | 26.98 | 34.29 |
| Bra035746.1-P | Field mustard | nucleus | 26.49 | 33.47 |
| Bra023927.1-P | Field mustard | nucleus | 23.75 | 33.18 |
| TraesCS7B01G145400.1 | Wheat | nucleus | 30.21 | 30.51 |
| TraesCS5B01G265400.1 | Wheat | nucleus | 27.46 | 29.21 |
Protein Annotations
| Gene3D:1.10.3180.10 | MapMan:11.5.2.4 | MapMan:15.5.11 | ncoils:Coil | InterPro:Ethylene_insens-like_DNA-bd | GO:GO:0003674 |
| GO:GO:0003700 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR023278 | PFAM:PF04873 |
| PANTHER:PTHR33305 | PANTHER:PTHR33305:SF11 | SUPFAM:SSF116768 | EnsemblPlantsGene:TraesCS2B01G116900 | EnsemblPlants:TraesCS2B01G116900.1 | SEG:seg |
Description
No Description!
Coordinates
chr2B:-:80120623..80122681
Molecular Weight (calculated)
67221.2 Da
IEP (calculated)
5.809
GRAVY (calculated)
-0.559
Length
619 amino acids
Sequence
(BLAST)
(BLAST)
001: MMGGGAAMMD RRMAFPAADG DVEKGFGFFG AGCFVGAGDL VDPVTAPAPE QRDRFADEEE SEEDEDDDVD GIEELERRMW RDRMRLKRLK ELQQRQSQRP
101: DGGAASKGWP RRPASQQDQQ ARRKKMSRAQ DGILKYMLKM MEACSAQGFV YGIVPENGKP VGGASDNLRA WWKEKVRFDR NAPAAIAKHR SDNAGPLCGG
201: EDGAGAAAGP RSLHELQDTT LGSLLSSLMQ HCDPPQRRFP LEKGVPPPWW PQGPSEAWWP EAGVPDDLGP PPYKKPHDLK KAWKVAVLTA VIKHMSPDVD
301: KVRRLVRQSK CLQDKMTARE IVTWLAVLKT EEELGHKLHP GACLPPRPSA GALSFDASSG EYDVDFFGEE AANQMKARSE AAAFVDLTMD ASSSNEFMIM
401: PPALMKEETT DADFTHAQKR SAPPAAADAE PDLMLNGNGR VYTCENVQCP HASHALGFLD RNARSAHQYS CRYNNPAVAA AQSKPPSSFF PGPPYSPQSQ
501: ALGGFDFGLP VADQRCLAGL MSMYETGVAA HRGATSDATT PGMQIGAGSL LAPRSLSGTN NLMQQQQSAA FFIGDDAPFG MAAPELGRFG PGFDLSAADY
601: AGAMQQPPPQ KHVGPNWFY
101: DGGAASKGWP RRPASQQDQQ ARRKKMSRAQ DGILKYMLKM MEACSAQGFV YGIVPENGKP VGGASDNLRA WWKEKVRFDR NAPAAIAKHR SDNAGPLCGG
201: EDGAGAAAGP RSLHELQDTT LGSLLSSLMQ HCDPPQRRFP LEKGVPPPWW PQGPSEAWWP EAGVPDDLGP PPYKKPHDLK KAWKVAVLTA VIKHMSPDVD
301: KVRRLVRQSK CLQDKMTARE IVTWLAVLKT EEELGHKLHP GACLPPRPSA GALSFDASSG EYDVDFFGEE AANQMKARSE AAAFVDLTMD ASSSNEFMIM
401: PPALMKEETT DADFTHAQKR SAPPAAADAE PDLMLNGNGR VYTCENVQCP HASHALGFLD RNARSAHQYS CRYNNPAVAA AQSKPPSSFF PGPPYSPQSQ
501: ALGGFDFGLP VADQRCLAGL MSMYETGVAA HRGATSDATT PGMQIGAGSL LAPRSLSGTN NLMQQQQSAA FFIGDDAPFG MAAPELGRFG PGFDLSAADY
601: AGAMQQPPPQ KHVGPNWFY
001: MGDLAMSVAD IRMENEPDDL ASDNVAEIDV SDEEIDADDL ERRMWKDRVR LKRIKERQKA GSQGAQTKET PKKISDQAQR KKMSRAQDGI LKYMLKLMEV
101: CKVRGFVYGI IPEKGKPVSG SSDNIRAWWK EKVKFDKNGP AAIAKYEEEC LAFGKSDGNR NSQFVLQDLQ DATLGSLLSS LMQHCDPPQR KYPLEKGTPP
201: PWWPTGNEEW WVKLGLPKSQ SPPYRKPHDL KKMWKVGVLT AVINHMLPDI AKIKRHVRQS KCLQDKMTAK ESAIWLAVLN QEESLIQQPS SDNGNSNVTE
301: THRRGNNADR RKPVVNSDSD YDVDGTEEAS GSVSSKDSRR NQIQKEQPTA ISHSVRDQDK AEKHRRRKRP RIRSGTVNRQ EEEQPEAQQR NILPDMNHVD
401: APLLEYNING THQEDDVVDP NIALGPEDNG LELVVPEFNN NYTYLPLVNE QTMMPVDERP MLYGPNPNQE LQFGSGYNFY NPSAVFVHNQ EDDILHTQIE
501: MNTQAPPHNS GFEEAPGGVL QPLGLLGNED GVTGSELPQY QSGILSPLTD LDFDYGGFGD DFSWFGA
101: CKVRGFVYGI IPEKGKPVSG SSDNIRAWWK EKVKFDKNGP AAIAKYEEEC LAFGKSDGNR NSQFVLQDLQ DATLGSLLSS LMQHCDPPQR KYPLEKGTPP
201: PWWPTGNEEW WVKLGLPKSQ SPPYRKPHDL KKMWKVGVLT AVINHMLPDI AKIKRHVRQS KCLQDKMTAK ESAIWLAVLN QEESLIQQPS SDNGNSNVTE
301: THRRGNNADR RKPVVNSDSD YDVDGTEEAS GSVSSKDSRR NQIQKEQPTA ISHSVRDQDK AEKHRRRKRP RIRSGTVNRQ EEEQPEAQQR NILPDMNHVD
401: APLLEYNING THQEDDVVDP NIALGPEDNG LELVVPEFNN NYTYLPLVNE QTMMPVDERP MLYGPNPNQE LQFGSGYNFY NPSAVFVHNQ EDDILHTQIE
501: MNTQAPPHNS GFEEAPGGVL QPLGLLGNED GVTGSELPQY QSGILSPLTD LDFDYGGFGD DFSWFGA
Arabidopsis Description
EIL3SLIM1 [Source:UniProtKB/TrEMBL;Acc:A0A178VZZ3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.