Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G278800.1 | Wheat | cytosol | 97.69 | 97.99 |
| TraesCS7D01G373800.1 | Wheat | cytosol | 98.15 | 97.85 |
| HORVU7Hr1G090240.1 | Barley | cytosol | 79.51 | 95.73 |
| HORVU1Hr1G089690.1 | Barley | cytosol, extracellular, mitochondrion | 35.9 | 87.59 |
| Os06t0605900-01 | Rice | cytosol | 78.74 | 81.5 |
| EER90022 | Sorghum | cytosol, plastid | 75.5 | 78.27 |
| HORVU5Hr1G029670.1 | Barley | mitochondrion | 60.71 | 76.8 |
| HORVU5Hr1G000950.4 | Barley | plastid | 51.62 | 74.94 |
| TraesCS6A01G181900.1 | Wheat | cytosol | 70.11 | 70.11 |
| Zm00001d000408_P001 | Maize | cytosol | 74.11 | 64.74 |
| Zm00001d036880_P003 | Maize | cytosol | 73.19 | 64.54 |
| GSMUA_Achr6P05220_001 | Banana | cytosol | 52.39 | 51.99 |
| GSMUA_Achr4P30680_001 | Banana | cytosol | 51.16 | 50.92 |
| GSMUA_Achr9P28510_001 | Banana | cytosol, nucleus, peroxisome | 50.54 | 50.15 |
| PGSC0003DMT400007545 | Potato | cytosol | 48.84 | 49.76 |
| KRH03688 | Soybean | cytosol | 48.54 | 49.3 |
| GSMUA_Achr10P... | Banana | extracellular, plasma membrane, plastid | 50.69 | 49.25 |
| Solyc12g009560.1.1 | Tomato | cytosol | 47.92 | 48.82 |
| KRH20255 | Soybean | cytosol | 47.77 | 48.51 |
| VIT_11s0016g05410.t01 | Wine grape | cytosol | 49.0 | 47.96 |
| PGSC0003DMT400079445 | Potato | cytosol, nucleus, peroxisome | 47.3 | 47.82 |
| GSMUA_Achr2P15920_001 | Banana | cytosol, peroxisome, plastid | 48.69 | 47.31 |
| Solyc07g008250.2.1 | Tomato | cytosol, nucleus, peroxisome | 46.69 | 47.27 |
| KRH62989 | Soybean | cytosol | 47.15 | 47.08 |
| KRH15886 | Soybean | cytosol | 46.38 | 46.74 |
| VIT_04s0008g05470.t01 | Wine grape | cytosol | 47.92 | 46.63 |
| KRH05167 | Soybean | cytosol | 43.3 | 46.07 |
| Solyc08g060810.2.1 | Tomato | plastid | 46.84 | 45.71 |
| AT2G25490.1 | Thale cress | plastid | 44.07 | 45.54 |
| PGSC0003DMT400040977 | Potato | nucleus | 46.84 | 45.44 |
| Bra036542.1-P | Field mustard | cytosol | 42.84 | 45.13 |
| CDX87090 | Canola | cytosol | 42.84 | 45.13 |
| KRH04870 | Soybean | cytosol | 18.8 | 44.85 |
| KRH52439 | Soybean | cytosol, nucleus, peroxisome | 43.91 | 44.67 |
| CDY35358 | Canola | cytosol | 42.84 | 44.62 |
| Bra034254.1-P | Field mustard | cytosol | 42.68 | 44.53 |
| CDY19807 | Canola | cytosol | 42.22 | 44.48 |
| AT5G25350.1 | Thale cress | cytosol | 42.53 | 44.3 |
| CDX76980 | Canola | cytosol | 40.83 | 44.24 |
| CDX88173 | Canola | cytosol | 42.37 | 44.21 |
| KRH61771 | Soybean | cytosol | 43.3 | 44.18 |
| Bra009835.1-P | Field mustard | cytosol | 42.06 | 43.89 |
| CDX80503 | Canola | cytosol | 41.91 | 43.8 |
| PGSC0003DMT400094835 | Potato | cytosol | 16.02 | 42.45 |
| PGSC0003DMT400042949 | Potato | cytosol | 34.82 | 40.94 |
| PGSC0003DMT400089433 | Potato | mitochondrion | 28.04 | 39.65 |
| Solyc06g049010.1.1 | Tomato | plastid | 36.98 | 38.71 |
| Solyc06g030620.1.1 | Tomato | cytosol | 11.86 | 38.31 |
| Solyc06g030610.1.1 | Tomato | cytosol | 15.41 | 36.5 |
| TraesCS3A01G067800.1 | Wheat | cytosol | 12.94 | 23.93 |
| TraesCS6A01G234100.2 | Wheat | cytosol | 15.1 | 23.5 |
| TraesCS5A01G091800.2 | Wheat | cytosol | 23.42 | 23.0 |
| TraesCS4A01G142500.3 | Wheat | plastid | 21.73 | 22.42 |
| TraesCS1A01G264900.1 | Wheat | cytosol | 12.02 | 21.08 |
| TraesCS3A01G407700.1 | Wheat | cytosol | 11.71 | 20.0 |
| TraesCS2A01G359900.1 | Wheat | cytosol | 16.64 | 19.96 |
| TraesCS5A01G161400.1 | Wheat | cytosol, plastid | 16.18 | 19.92 |
| TraesCS5A01G150800.2 | Wheat | mitochondrion | 20.49 | 19.5 |
| TraesCS4A01G230600.2 | Wheat | plastid | 12.02 | 19.26 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G377500.1 | EnsemblPlantsGene:TraesCS7A01G377500 | Gene3D:3.80.10.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR001611 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_Cys-con_subtyp | PANTHER:PTHR44327 |
| PANTHER:PTHR44327:SF3 | PFAM:PF13516 | SEG:seg | SMART:SM00367 | SUPFAM:SSF52047 | MapMan:11.5.2.6 |
| MapMan:19.2.2.8.1.4.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr7A:+:552679086..552681150
Molecular Weight (calculated)
68211.9 Da
IEP (calculated)
6.576
GRAVY (calculated)
0.235
Length
649 amino acids
Sequence
(BLAST)
(BLAST)
001: MPPFHDCRDG GLLVLDPAAA MFGGVRQRKR ARVTAVPPCV FAAAAAEEEA LRAAPAAKRQ RQREAPTLDA LPDGCLFEIL RRVQGARARG ASSCVSRRWL
101: ALLGGIRASE IKRAPAVPDL NQVFVCEDED EDEAADARPG RSERTLEGEG ATDVALTAAA VADGLRGSLE SVVVRGSHPT RGVTDSGLSA VARGCPSLRS
201: LAMWDVPQVT DAGLAEIAAG CPSLEKLDIT GCPLVTDKGL VAIAQGCPDL KTLTIEACSG VANEGLKAIG RSCSKLQAVN IKNCAYVGDQ GVSGLICSAS
301: ASLAKVCLQG LSITDASLAV IGYYGKAITN LTLTRLSAVG ERGFWVMANA LGLQKLRCMS ITSCPGVTEL ALVSIAKFCP SLKQLYLRKC SQISDGLLKD
401: FAEAAKVLEN LQIEECNRIT LMGILSFLLN CSPKFKTLSL VKCTGIKDIC SAPAQLPVCK SLRSLTIKQC PGFTDASLAV VGMICPHLEN LDLSGLGAVT
501: DDGLLPLIRS SESGLIHVDL NGCENLTDAA ISALVKAHGT SLAHLSLEGC SKITDASLFA ISESCSELAE LDLSNCMVSD YGVAVLSSAE RLKLRVLSLS
601: GCLKVTPKSV PFLGSMPASL EGLNLQFNFI GNHNIASLEK QLWWCDILA
101: ALLGGIRASE IKRAPAVPDL NQVFVCEDED EDEAADARPG RSERTLEGEG ATDVALTAAA VADGLRGSLE SVVVRGSHPT RGVTDSGLSA VARGCPSLRS
201: LAMWDVPQVT DAGLAEIAAG CPSLEKLDIT GCPLVTDKGL VAIAQGCPDL KTLTIEACSG VANEGLKAIG RSCSKLQAVN IKNCAYVGDQ GVSGLICSAS
301: ASLAKVCLQG LSITDASLAV IGYYGKAITN LTLTRLSAVG ERGFWVMANA LGLQKLRCMS ITSCPGVTEL ALVSIAKFCP SLKQLYLRKC SQISDGLLKD
401: FAEAAKVLEN LQIEECNRIT LMGILSFLLN CSPKFKTLSL VKCTGIKDIC SAPAQLPVCK SLRSLTIKQC PGFTDASLAV VGMICPHLEN LDLSGLGAVT
501: DDGLLPLIRS SESGLIHVDL NGCENLTDAA ISALVKAHGT SLAHLSLEGC SKITDASLFA ISESCSELAE LDLSNCMVSD YGVAVLSSAE RLKLRVLSLS
601: GCLKVTPKSV PFLGSMPASL EGLNLQFNFI GNHNIASLEK QLWWCDILA
001: MSGIFRFSGD EDCLLGGSMY LSPGSCPGVY YPARKRLRVA ATSFYSGFEE KQTSIDVLPE ECLFEILRRL PSGQERSACA CVSKHWLNLL SSISRSEVNE
101: SSVQDVEEGE GFLSRSLEGK KATDLRLAAI AVGTSSRGGL GKLQIRGSGF ESKVTDVGLG AVAHGCPSLR IVSLWNLPAV SDLGLSEIAR SCPMIEKLDL
201: SRCPGITDSG LVAIAENCVN LSDLTIDSCS GVGNEGLRAI ARRCVNLRSI SIRSCPRIGD QGVAFLLAQA GSYLTKVKLQ MLNVSGLSLA VIGHYGAAVT
301: DLVLHGLQGV NEKGFWVMGN AKGLKKLKSL SVMSCRGMTD VGLEAVGNGC PDLKHVSLNK CLLVSGKGLV ALAKSALSLE SLKLEECHRI NQFGLMGFLM
401: NCGSKLKAFS LANCLGISDF NSESSLPSPS CSSLRSLSIR CCPGFGDASL AFLGKFCHQL QDVELCGLNG VTDAGVRELL QSNNVGLVKV NLSECINVSD
501: NTVSAISVCH GRTLESLNLD GCKNITNASL VAVAKNCYSV NDLDISNTLV SDHGIKALAS SPNHLNLQVL SIGGCSSITD KSKACIQKLG RTLLGLNIQR
601: CGRISSSTVD TLLENLWRCD ILY
101: SSVQDVEEGE GFLSRSLEGK KATDLRLAAI AVGTSSRGGL GKLQIRGSGF ESKVTDVGLG AVAHGCPSLR IVSLWNLPAV SDLGLSEIAR SCPMIEKLDL
201: SRCPGITDSG LVAIAENCVN LSDLTIDSCS GVGNEGLRAI ARRCVNLRSI SIRSCPRIGD QGVAFLLAQA GSYLTKVKLQ MLNVSGLSLA VIGHYGAAVT
301: DLVLHGLQGV NEKGFWVMGN AKGLKKLKSL SVMSCRGMTD VGLEAVGNGC PDLKHVSLNK CLLVSGKGLV ALAKSALSLE SLKLEECHRI NQFGLMGFLM
401: NCGSKLKAFS LANCLGISDF NSESSLPSPS CSSLRSLSIR CCPGFGDASL AFLGKFCHQL QDVELCGLNG VTDAGVRELL QSNNVGLVKV NLSECINVSD
501: NTVSAISVCH GRTLESLNLD GCKNITNASL VAVAKNCYSV NDLDISNTLV SDHGIKALAS SPNHLNLQVL SIGGCSSITD KSKACIQKLG RTLLGLNIQR
601: CGRISSSTVD TLLENLWRCD ILY
Arabidopsis Description
EBF2EIN3-binding F-box protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q708Y0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.