Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER90022 | Sorghum | cytosol, plastid | 79.41 | 94.25 |
| Zm00001d036880_P003 | Maize | cytosol | 84.93 | 85.73 |
| HORVU7Hr1G090240.1 | Barley | cytosol | 57.2 | 78.85 |
| TraesCS7B01G278800.1 | Wheat | cytosol | 65.14 | 74.81 |
| TraesCS7D01G373800.1 | Wheat | cytosol | 65.28 | 74.5 |
| Os06t0605900-01 | Rice | cytosol | 62.72 | 74.32 |
| TraesCS7A01G377500.1 | Wheat | cytosol | 64.74 | 74.11 |
| HORVU1Hr1G089690.1 | Barley | cytosol, extracellular, mitochondrion | 25.84 | 72.18 |
| Zm00001d015778_P001 | Maize | cytosol | 58.28 | 67.34 |
| Zm00001d053642_P001 | Maize | cytosol | 58.41 | 66.67 |
| Zm00001d028552_P001 | Maize | cytosol, extracellular, mitochondrion, plastid | 19.65 | 65.77 |
| Zm00001d037295_P001 | Maize | mitochondrion | 21.27 | 64.75 |
| HORVU5Hr1G029670.1 | Barley | mitochondrion | 43.61 | 63.16 |
| Zm00001d039723_P001 | Maize | cytosol, extracellular, plastid | 19.11 | 60.94 |
| HORVU5Hr1G000950.4 | Barley | plastid | 35.53 | 59.06 |
| GSMUA_Achr4P30680_001 | Banana | cytosol | 43.47 | 49.54 |
| GSMUA_Achr6P05220_001 | Banana | cytosol | 43.47 | 49.39 |
| GSMUA_Achr10P... | Banana | extracellular, plasma membrane, plastid | 43.88 | 48.8 |
| GSMUA_Achr9P28510_001 | Banana | cytosol, nucleus, peroxisome | 41.72 | 47.4 |
| GSMUA_Achr2P15920_001 | Banana | cytosol, peroxisome, plastid | 42.53 | 47.31 |
| PGSC0003DMT400007545 | Potato | cytosol | 40.38 | 47.1 |
| PGSC0003DMT400079445 | Potato | cytosol, nucleus, peroxisome | 40.11 | 46.42 |
| Solyc12g009560.1.1 | Tomato | cytosol | 39.7 | 46.31 |
| Solyc07g008250.2.1 | Tomato | cytosol, nucleus, peroxisome | 39.57 | 45.87 |
| KRH03688 | Soybean | cytosol | 39.43 | 45.85 |
| KRH15886 | Soybean | cytosol | 39.57 | 45.65 |
| KRH20255 | Soybean | cytosol | 39.03 | 45.38 |
| VIT_11s0016g05410.t01 | Wine grape | cytosol | 40.38 | 45.25 |
| Bra036542.1-P | Field mustard | cytosol | 37.28 | 44.97 |
| KRH62989 | Soybean | cytosol | 39.17 | 44.77 |
| VIT_04s0008g05470.t01 | Wine grape | cytosol | 39.97 | 44.53 |
| KRH05167 | Soybean | cytosol | 36.47 | 44.43 |
| CDX87090 | Canola | cytosol | 36.74 | 44.32 |
| AT2G25490.1 | Thale cress | plastid | 37.42 | 44.27 |
| AT5G25350.1 | Thale cress | cytosol | 37.01 | 44.14 |
| CDX80503 | Canola | cytosol | 36.88 | 44.12 |
| CDX88173 | Canola | cytosol | 36.88 | 44.05 |
| CDY19807 | Canola | cytosol | 36.47 | 43.99 |
| CDY35358 | Canola | cytosol | 36.88 | 43.98 |
| Solyc08g060810.2.1 | Tomato | plastid | 39.3 | 43.91 |
| Bra009835.1-P | Field mustard | cytosol | 36.74 | 43.89 |
| Bra034254.1-P | Field mustard | cytosol | 36.74 | 43.89 |
| PGSC0003DMT400040977 | Potato | nucleus | 39.3 | 43.65 |
| CDX76980 | Canola | cytosol | 34.86 | 43.24 |
| KRH52439 | Soybean | cytosol, nucleus, peroxisome | 36.74 | 42.79 |
| KRH61771 | Soybean | cytosol | 36.61 | 42.77 |
| PGSC0003DMT400094835 | Potato | cytosol | 14.0 | 42.45 |
| KRH04870 | Soybean | cytosol | 15.48 | 42.28 |
| PGSC0003DMT400089433 | Potato | mitochondrion | 25.3 | 40.96 |
| PGSC0003DMT400042949 | Potato | cytosol | 29.07 | 39.13 |
| Solyc06g049010.1.1 | Tomato | plastid | 30.82 | 36.94 |
| Solyc06g030610.1.1 | Tomato | cytosol | 13.32 | 36.13 |
| Solyc06g030620.1.1 | Tomato | cytosol | 9.69 | 35.82 |
| Zm00001d015974_P002 | Maize | cytosol | 11.84 | 24.58 |
| Zm00001d007640_P001 | Maize | cytosol | 20.59 | 24.36 |
| Zm00001d051219_P001 | Maize | cytosol | 13.06 | 23.26 |
| Zm00001d038224_P004 | Maize | cytosol | 10.77 | 21.74 |
| Zm00001d048695_P001 | Maize | cytosol | 18.84 | 21.6 |
| Zm00001d041635_P002 | Maize | cytosol | 19.25 | 21.57 |
| Zm00001d023825_P001 | Maize | cytosol | 18.98 | 21.36 |
| Zm00001d044622_P002 | Maize | mitochondrion | 19.92 | 21.02 |
| Zm00001d003103_P001 | Maize | plastid | 14.0 | 20.0 |
| Zm00001d025808_P001 | Maize | plastid | 14.54 | 19.78 |
| Zm00001d025812_P001 | Maize | plastid | 14.54 | 19.78 |
| Zm00001d005072_P003 | Maize | mitochondrion | 19.11 | 19.59 |
| Zm00001d007294_P001 | Maize | cytosol | 10.63 | 19.46 |
| Zm00001d019677_P001 | Maize | cytosol | 13.73 | 19.43 |
| Zm00001d000224_P001 | Maize | cytosol | 10.9 | 18.71 |
Protein Annotations
| MapMan:11.5.2.6 | MapMan:19.2.2.8.1.4.2 | Gene3D:3.80.10.10 | UniProt:A0A1X7YIQ4 | ncoils:Coil | InterPro:F-box-like_dom_sf |
| InterPro:F-box_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR001611 | InterPro:IPR001810 |
| InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_Cys-con_subtyp | PFAM:PF00646 | PFAM:PF13516 |
| PANTHER:PTHR44327 | PANTHER:PTHR44327:SF3 | SMART:SM00367 | SUPFAM:SSF52047 | SUPFAM:SSF81383 | UniParc:UPI000844011C |
| EnsemblPlantsGene:Zm00001d000408 | EnsemblPlants:Zm00001d000408_P001 | EnsemblPlants:Zm00001d000408_T001 | SEG:seg | : | : |
Description
EIN3-binding F-box protein 1
Coordinates
chrB73V4_ctg58:-:30440..33578
Molecular Weight (calculated)
78426.5 Da
IEP (calculated)
8.316
GRAVY (calculated)
0.161
Length
743 amino acids
Sequence
(BLAST)
(BLAST)
001: MTERGGYELR PTWATCLPCS PPHKKPAPPG TPSPPHHHHH LLLFPKPVRS LPFIRLLRHF FPVAVSDRVR LRRPTSKSAL GSSGAVASPP LLRFASSGVL
101: GATFGFVDGV LGPLRPDMSP FQGYRGDGVL AGVRSRKRVF ATAAAEPVTA AAKRQKRRDE PSLDAVPDEC LFEVLRRVQG TRARCASACV SRRWLALLAG
201: IRASEAVLAP AAPAVPDLNQ EYLSEDDEAD LMDHDGDARE RTLEGMLATD ARLTAAAVAG RLASVSVRGS HPARGVTDAG VCALARGCPE LRSLTLWDVP
301: QVTDAGLAEI AAECHSLERL DITGCPMITD KGLVAVAQGC PELKSLTIEA CSGVANEGLK AIGRCCAKLQ AVSVKNCAHV DDQGVSGLVC SATASLAKVR
401: LQGLNITDAS LAVIGYYGKS IKDLTLARLP AVGERGFWVM ANALGLQKLR CMTVVSCPGL TDLALASVAK FSPSLKTVNL KKCSKVSDGC LKEFAESSRV
501: LESLQIEECS KVTLVGILAF LLNCNPKFKA LSLSKCIGIK DICSAPAQLP VCKSLRSLTI KDCPGFTDAS LAVVGMICPQ LESIDLSGLG AVTDNGFLPL
601: MKKGSESGLV RVGLNGCESL TDAAVSALAK AHGASLAHLS LEGCSKITDA SLFAISESCS QLAELDLSNC MVSDYGVAVL AAARQLKLRV LSLSGCMKVT
701: QKSVPFLGSM SSSLEALNLQ FNFIGNHNIA SLEKQLWRCD ILA
101: GATFGFVDGV LGPLRPDMSP FQGYRGDGVL AGVRSRKRVF ATAAAEPVTA AAKRQKRRDE PSLDAVPDEC LFEVLRRVQG TRARCASACV SRRWLALLAG
201: IRASEAVLAP AAPAVPDLNQ EYLSEDDEAD LMDHDGDARE RTLEGMLATD ARLTAAAVAG RLASVSVRGS HPARGVTDAG VCALARGCPE LRSLTLWDVP
301: QVTDAGLAEI AAECHSLERL DITGCPMITD KGLVAVAQGC PELKSLTIEA CSGVANEGLK AIGRCCAKLQ AVSVKNCAHV DDQGVSGLVC SATASLAKVR
401: LQGLNITDAS LAVIGYYGKS IKDLTLARLP AVGERGFWVM ANALGLQKLR CMTVVSCPGL TDLALASVAK FSPSLKTVNL KKCSKVSDGC LKEFAESSRV
501: LESLQIEECS KVTLVGILAF LLNCNPKFKA LSLSKCIGIK DICSAPAQLP VCKSLRSLTI KDCPGFTDAS LAVVGMICPQ LESIDLSGLG AVTDNGFLPL
601: MKKGSESGLV RVGLNGCESL TDAAVSALAK AHGASLAHLS LEGCSKITDA SLFAISESCS QLAELDLSNC MVSDYGVAVL AAARQLKLRV LSLSGCMKVT
701: QKSVPFLGSM SSSLEALNLQ FNFIGNHNIA SLEKQLWRCD ILA
001: MSQIFSFAGE NDFYRRGAIY PNPKDASLLL SLGSFADVYF PPSKRSRVVA PTIFSAFEKK PVSIDVLPDE CLFEIFRRLS GPQERSACAF VSKQWLTLVS
101: SIRQKEIDVP SKITEDGDDC EGCLSRSLDG KKATDVRLAA IAVGTAGRGG LGKLSIRGSN SAKVSDLGLR SIGRSCPSLG SLSLWNVSTI TDNGLLEIAE
201: GCAQLEKLEL NRCSTITDKG LVAIAKSCPN LTELTLEACS RIGDEGLLAI ARSCSKLKSV SIKNCPLVRD QGIASLLSNT TCSLAKLKLQ MLNVTDVSLA
301: VVGHYGLSIT DLVLAGLSHV SEKGFWVMGN GVGLQKLNSL TITACQGVTD MGLESVGKGC PNMKKAIISK SPLLSDNGLV SFAKASLSLE SLQLEECHRV
401: TQFGFFGSLL NCGEKLKAFS LVNCLSIRDL TTGLPASSHC SALRSLSIRN CPGFGDANLA AIGKLCPQLE DIDLCGLKGI TESGFLHLIQ SSLVKINFSG
501: CSNLTDRVIS AITARNGWTL EVLNIDGCSN ITDASLVSIA ANCQILSDLD ISKCAISDSG IQALASSDKL KLQILSVAGC SMVTDKSLPA IVGLGSTLLG
601: LNLQQCRSIS NSTVDFLVER LYKCDILS
101: SIRQKEIDVP SKITEDGDDC EGCLSRSLDG KKATDVRLAA IAVGTAGRGG LGKLSIRGSN SAKVSDLGLR SIGRSCPSLG SLSLWNVSTI TDNGLLEIAE
201: GCAQLEKLEL NRCSTITDKG LVAIAKSCPN LTELTLEACS RIGDEGLLAI ARSCSKLKSV SIKNCPLVRD QGIASLLSNT TCSLAKLKLQ MLNVTDVSLA
301: VVGHYGLSIT DLVLAGLSHV SEKGFWVMGN GVGLQKLNSL TITACQGVTD MGLESVGKGC PNMKKAIISK SPLLSDNGLV SFAKASLSLE SLQLEECHRV
401: TQFGFFGSLL NCGEKLKAFS LVNCLSIRDL TTGLPASSHC SALRSLSIRN CPGFGDANLA AIGKLCPQLE DIDLCGLKGI TESGFLHLIQ SSLVKINFSG
501: CSNLTDRVIS AITARNGWTL EVLNIDGCSN ITDASLVSIA ANCQILSDLD ISKCAISDSG IQALASSDKL KLQILSVAGC SMVTDKSLPA IVGLGSTLLG
601: LNLQQCRSIS NSTVDFLVER LYKCDILS
Arabidopsis Description
EBF1EIN3-binding F-box protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKK0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.