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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • cytosol 2
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, secretory
iPSORT:secretory
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d041635_P002 Maize cytosol 95.15 94.72
Os12t0552700-01 Rice cytosol, peroxisome 49.7 87.94
TraesCS5A01G091800.2 Wheat cytosol 84.7 84.57
TraesCS5B01G097800.2 Wheat cytosol 84.24 84.11
TraesCS5D01G103900.3 Wheat cytosol 84.09 83.33
Zm00001d048695_P001 Maize cytosol 71.21 72.53
HORVU5Hr1G024060.1 Barley cytosol, plastid 83.79 65.6
GSMUA_Achr11P... Banana cytosol 61.36 61.74
GSMUA_Achr6P20450_001 Banana cytosol 60.45 60.45
KRH68483 Soybean cytosol 51.67 53.2
KRG96764 Soybean cytosol 51.52 53.04
VIT_14s0060g01970.t01 Wine grape cytosol, plastid 50.61 51.94
CDX88253 Canola cytosol 48.94 50.47
CDX80608 Canola cytosol 48.79 50.31
Bra009931.1-P Field mustard cytosol 48.79 50.31
AT5G27920.1 Thale cress cytosol, extracellular, peroxisome 48.33 49.69
Bra036607.1-P Field mustard cytosol 47.73 49.3
CDY19741 Canola cytosol 46.06 49.27
CDY53337 Canola cytosol 47.42 48.98
PGSC0003DMT400063732 Potato cytosol 47.42 48.83
Solyc01g099970.2.1 Tomato extracellular 45.45 48.47
Zm00001d044622_P002 Maize mitochondrion 40.91 38.35
Zm00001d005072_P003 Maize mitochondrion 38.94 35.45
Zm00001d051219_P001 Maize cytosol 20.0 31.65
Zm00001d007640_P001 Maize cytosol 27.27 28.66
Zm00001d015974_P002 Maize cytosol 13.64 25.14
Zm00001d007294_P001 Maize cytosol 14.24 23.15
Zm00001d038224_P004 Maize cytosol 12.58 22.55
Zm00001d053642_P001 Maize cytosol 21.52 21.81
Zm00001d015778_P001 Maize cytosol 21.21 21.77
Zm00001d019677_P001 Maize cytosol 17.12 21.52
Zm00001d000224_P001 Maize cytosol 13.48 20.55
Zm00001d036880_P003 Maize cytosol 21.67 19.43
Zm00001d028552_P001 Maize cytosol, extracellular, mitochondrion, plastid 6.52 19.37
Zm00001d000408_P001 Maize cytosol 21.36 18.98
Zm00001d003103_P001 Maize plastid 14.39 18.27
Zm00001d037295_P001 Maize mitochondrion 6.52 17.62
Zm00001d039723_P001 Maize cytosol, extracellular, plastid 6.21 17.6
Zm00001d025812_P001 Maize plastid 14.09 17.03
Zm00001d025808_P001 Maize plastid 14.09 17.03
Protein Annotations
EntrezGene:103640946Gene3D:3.80.10.10MapMan:35.1ProteinID:AQK40174.1ProteinID:AQK40176.1ProteinID:AQK40177.1
GO:GO:0003674GO:GO:0005488GO:GO:0005515InterPro:IPR001611InterPro:IPR032675UniProt:K7TNI1
InterPro:LRR_dom_sfInterPro:Leu-rich_rptInterPro:Leu-rich_rpt_Cys-con_subtypPFAM:PF13516PANTHER:PTHR44309PANTHER:PTHR44309:SF2
SMART:SM00367SUPFAM:SSF52047UniParc:UPI0002217F6CEnsemblPlantsGene:Zm00001d023825EnsemblPlants:Zm00001d023825_P001EnsemblPlants:Zm00001d023825_T001
SEG:seg:::::
Description
F-box family protein
Coordinates
chr10:-:23585478..23590215
Molecular Weight (calculated)
71210.4 Da
IEP (calculated)
7.384
GRAVY (calculated)
0.194
Length
660 amino acids
Sequence
(BLAST)
001: MSREAQKLDC AAGAGGIGVL SLDLLGQVLE HLREPRDRKT CRLVSRAFER AEAAHRRALR VLRREPLPRL LRAFPALERL DLSACASLDD ASLAAAVADA
101: GGGLAGLRSV CLARANGVGW RGLEALVAAC PKLAAVDLSH CVTAGDREAA ALAAASELRD LRLDKCLAVT DMGLAKVAVG CPKLEKLSLK WCREISDIGI
201: DLLAKKCPEL RSLNISYLKV GNGSLGSISS LERLEELAMV CCSGIDDEGL ELLSKGSDSL QSVDVSRCDH VTSEGLASLI DGRNFLQKLY AADCLHEIGQ
301: RFLSKLARLK ETLTLLKLDG LEVSDSLLQA IGESCNKLVE IGLSKCSGVT DGGISSLVAR CSDLRTIDLT CCNLITNNAL DSIADNCKML ECLRLESCSL
401: INEKGLERIT TCCPNLKEID LTDCGVDDAA LQHLAKCSEL RILKLGLCSS ISDRGIAFIS SNCGKLVELD LYRCNSITDD GLAALANGCK RIKLLNLCYC
501: NKITDTGLGH LGSLEELTNL ELRCLVRVTG IGISSVAIGC KNLIELDLKR CYSVDDAGLW ALARYALNLR QLTISYCQVT GLGLCHLLSS LRCLQDIKMV
601: HLSWVSIEGF EMALRAACGR LKKLKMLCGL KTVLSPELLQ MLQACGCRIR WVNKPLVYKD
Best Arabidopsis Sequence Match ( AT5G27920.1 )
(BLAST)
001: MSTSPSILSV LSEDLLVRVY ECLDPPCRKT WRLISKDFLR VDSLTRTTIR ILRVEFLPTL LFKYPNLSSL DLSVCPKLDD DVVLRLALDG AISTLGIKSL
101: NLSRSTAVRA RGLETLARMC HALERVDVSH CWGFGDREAA ALSSATGLRE LKMDKCLSLS DVGLARIVVG CSNLNKISLK WCMEISDLGI DLLCKICKGL
201: KSLDVSYLKI TNDSIRSIAL LVKLEVLDMV SCPLIDDGGL QFLENGSPSL QEVDVTRCDR VSLSGLISIV RGHPDIQLLK ASHCVSEVSG SFLKYIKGLK
301: HLKTIWIDGA HVSDSSLVSL SSSCRSLMEI GLSRCVDVTD IGMISLARNC LNLKTLNLAC CGFVTDVAIS AVAQSCRNLG TLKLESCHLI TEKGLQSLGC
401: YSMLVQELDL TDCYGVNDRG LEYISKCSNL QRLKLGLCTN ISDKGIFHIG SKCSKLLELD LYRCAGFGDD GLAALSRGCK SLNRLILSYC CELTDTGVEQ
501: IRQLELLSHL ELRGLKNITG VGLAAIASGC KKLGYLDVKL CENIDDSGFW ALAYFSKNLR QINLCNCSVS DTALCMLMSN LSRVQDVDLV HLSRVTVEGF
601: EFALRACCNR LKKLKLLAPL RFLLSSELLE TLHARGCRIR WD
Arabidopsis Description
At5g27920 [Source:UniProtKB/TrEMBL;Acc:Q8GZ31]
SUBAcon: [peroxisome,extracellular,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.