Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES09509 | Sorghum | cytosol | 75.37 | 79.27 |
| TraesCS4B01G085300.2 | Wheat | plastid | 68.72 | 68.89 |
| TraesCS4A01G230600.2 | Wheat | plastid | 68.47 | 68.64 |
| TraesCS4D01G083300.1 | Wheat | cytosol | 59.36 | 62.44 |
| Os11t0264200-01 | Rice | cytosol | 58.13 | 61.94 |
| HORVU4Hr1G014630.1 | Barley | cytosol | 58.37 | 61.4 |
| GSMUA_Achr8P28940_001 | Banana | cytosol | 40.89 | 43.68 |
| PGSC0003DMT400053176 | Potato | cytosol | 38.18 | 39.74 |
| KRH47976 | Soybean | cytosol | 37.19 | 38.92 |
| CDY28039 | Canola | cytosol | 36.95 | 38.46 |
| Solyc06g007680.1.1 | Tomato | cytosol | 37.68 | 38.25 |
| Bra029656.1-P | Field mustard | cytosol | 37.19 | 38.23 |
| CDY35942 | Canola | cytosol | 36.95 | 37.97 |
| AT3G07550.2 | Thale cress | cytosol | 36.95 | 37.97 |
| Zm00001d051219_P001 | Maize | cytosol | 18.47 | 17.99 |
| Zm00001d038224_P004 | Maize | cytosol | 13.79 | 15.22 |
| Zm00001d000224_P001 | Maize | cytosol | 15.52 | 14.55 |
| Zm00001d023825_P001 | Maize | cytosol | 23.15 | 14.24 |
| Zm00001d044622_P002 | Maize | mitochondrion | 24.38 | 14.06 |
| Zm00001d041635_P002 | Maize | cytosol | 22.91 | 14.03 |
| Zm00001d019677_P001 | Maize | cytosol | 17.98 | 13.9 |
| Zm00001d005072_P003 | Maize | mitochondrion | 24.38 | 13.66 |
| Zm00001d048695_P001 | Maize | cytosol | 21.67 | 13.58 |
| Zm00001d007640_P001 | Maize | cytosol | 20.94 | 13.54 |
| Zm00001d015974_P002 | Maize | cytosol | 11.82 | 13.41 |
| Zm00001d053642_P001 | Maize | cytosol | 20.69 | 12.9 |
| Zm00001d015778_P001 | Maize | cytosol | 19.95 | 12.6 |
| Zm00001d003103_P001 | Maize | plastid | 14.78 | 11.54 |
| Zm00001d036880_P003 | Maize | cytosol | 19.7 | 10.87 |
| Zm00001d025812_P001 | Maize | plastid | 14.53 | 10.81 |
| Zm00001d000408_P001 | Maize | cytosol | 19.46 | 10.63 |
| Zm00001d025808_P001 | Maize | plastid | 14.29 | 10.62 |
| Zm00001d037295_P001 | Maize | mitochondrion | 5.67 | 9.43 |
| Zm00001d039723_P001 | Maize | cytosol, extracellular, plastid | 4.19 | 7.3 |
| Zm00001d028552_P001 | Maize | cytosol, extracellular, mitochondrion, plastid | 3.94 | 7.21 |
Protein Annotations
| EnsemblPlants:Zm00001d007294_P001 | EnsemblPlants:Zm00001d007294_T001 | EnsemblPlantsGene:Zm00001d007294 | Gene3D:3.80.10.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:IPR001611 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_Cys-con_subtyp |
| PANTHER:PTHR33674 | PANTHER:PTHR33674:SF6 | PFAM:PF13516 | ProteinID:ONM26466.1 | SMART:SM00367 | SUPFAM:SSF52047 |
| UniParc:UPI000842ED09 | UniProt:A0A1D6F595 | MapMan:35.1 | : | : | : |
Description
F-box/LRR-repeat protein 12
Coordinates
chr2:+:226984490..226991125
Molecular Weight (calculated)
43565.0 Da
IEP (calculated)
8.245
GRAVY (calculated)
0.181
Length
406 amino acids
Sequence
(BLAST)
(BLAST)
001: MSQSDVDYSC GSCGYPLNLS SSNRSTSEVG SYKKSLKKGL ISFISVDLSR FTQVDEVSCF PLTWRGYRPK TKLLCRICGA SIGYGYDKEH AKCIPKILAH
101: SPCLNRISLA GLTELPDSAL STLRVSGSSL KSFSLYCCSG ITDDGLAQVA IGCPNLVVVE LQSCFNITDA ALESLSKGCR GLKSLNLGSC MGITDQGVSA
201: IFSNCPNICT LIVTGCRRLS GAGFRGCSSS FRYLEAESCM LSPDGLLDIA SGSGLKYLNL QKLRSSTGLD GLGNLALAKS LCILNLRMCR YLTDDSVAAI
301: ASGCPLLEEW NLAVCHGVHL PGWSAIGLYC SKLRVLHVNR CRHICDQSLL ALGNGCPRLE AVHINGCAKV TNNGLALFTL SRPHVNLRVY EVMSIGPSIE
401: NLFRLH
101: SPCLNRISLA GLTELPDSAL STLRVSGSSL KSFSLYCCSG ITDDGLAQVA IGCPNLVVVE LQSCFNITDA ALESLSKGCR GLKSLNLGSC MGITDQGVSA
201: IFSNCPNICT LIVTGCRRLS GAGFRGCSSS FRYLEAESCM LSPDGLLDIA SGSGLKYLNL QKLRSSTGLD GLGNLALAKS LCILNLRMCR YLTDDSVAAI
301: ASGCPLLEEW NLAVCHGVHL PGWSAIGLYC SKLRVLHVNR CRHICDQSLL ALGNGCPRLE AVHINGCAKV TNNGLALFTL SRPHVNLRVY EVMSIGPSIE
401: NLFRLH
001: MEDVSESDNN VETSIIHLPD DCLSFIFQRL DSVADHDSFG LTCHRWLNIQ NISRRSLQLL TRFQWLEHLS LSGCTVLNDS SLDSLRYPGA RLHTLYLDCC
101: FGISDDGIST IASFCPNLSV VSLYRCNISD IGLETLARAS LSLKCVNLSY CPLVSDFGIK ALSQACLQLE SVKISNCKSI TGVGFSGCSP TLGYVDADSC
201: QLEPKGITGI ISGGGIEFLN ISGVSCYIRK DGLVPIGSGI ASKLRILNLR MCRTVGDESI EAIAKGCPLL QEWNLALCHE VKISGWEAVG KWCRNLKKLH
301: VNRCRNLCDQ GLLALRCGCM NLQILYMNGN ARLTPTAIEM FRLHRADITL RTEEMMVIGP DWRLYAQE
101: FGISDDGIST IASFCPNLSV VSLYRCNISD IGLETLARAS LSLKCVNLSY CPLVSDFGIK ALSQACLQLE SVKISNCKSI TGVGFSGCSP TLGYVDADSC
201: QLEPKGITGI ISGGGIEFLN ISGVSCYIRK DGLVPIGSGI ASKLRILNLR MCRTVGDESI EAIAKGCPLL QEWNLALCHE VKISGWEAVG KWCRNLKKLH
301: VNRCRNLCDQ GLLALRCGCM NLQILYMNGN ARLTPTAIEM FRLHRADITL RTEEMMVIGP DWRLYAQE
Arabidopsis Description
FBL12F-box/LRR-repeat protein 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRR1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.