CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d007294_P001	Maize	cytosol	79.27	75.37
Os11t0264200-01	Rice	cytosol	70.21	71.13
TraesCS4D01G083300.1	Wheat	cytosol	69.69	69.69
HORVU4Hr1G014630.1	Barley	cytosol	68.13	68.13
TraesCS4B01G085300.2	Wheat	plastid	63.47	60.49
TraesCS4A01G230600.2	Wheat	plastid	63.21	60.25
GSMUA_Achr8P28940_001	Banana	cytosol	47.93	48.68
PGSC0003DMT400053176	Potato	cytosol	43.26	42.82
KRH47976	Soybean	cytosol	42.23	42.01
AT3G07550.2	Thale cress	cytosol	42.49	41.52
CDY28039	Canola	cytosol	41.71	41.28
CDY35942	Canola	cytosol	42.23	41.27
Solyc06g007680.1.1	Tomato	cytosol	42.75	41.25
Bra029656.1-P	Field mustard	cytosol	41.97	41.01
KXG30697	Sorghum	cytosol	20.47	18.72
EES03986	Sorghum	cytosol	18.13	18.37
EES18256	Sorghum	cytosol, nucleus, plastid	16.06	16.8
KXG23663	Sorghum	cytosol	25.13	14.65
KXG22793	Sorghum	nucleus	25.39	14.08
EES08900	Sorghum	cytosol	22.8	13.86
EES04933	Sorghum	cytosol	12.44	13.75
EES07863	Sorghum	nucleus	24.61	13.75
KXG29052	Sorghum	plastid	23.06	13.48
EES06473	Sorghum	cytosol, peroxisome, plasma membrane	22.8	13.44
OQU89081	Sorghum	cytosol	17.88	13.14
EER90022	Sorghum	cytosol, plastid	20.73	12.78
KXG26667	Sorghum	plastid	13.99	11.54

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	EntrezGene:8057111	UniProt:C5Y799	ncoils:Coil	EnsemblPlants:EES09509
ProteinID:EES09509	ProteinID:EES09509.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001611
InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_Cys-con_subtyp	PFAM:PF13516	PANTHER:PTHR44001
PANTHER:PTHR44001:SF1	SMART:SM00367	EnsemblPlantsGene:SORBI_3005G079900	SUPFAM:SSF52047	unigene:Sbi.5174	UniParc:UPI0001A868A3
RefSeq:XP_002450521.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:-:10489538..10490941

Molecular Weight (calculated)

41862.9 Da

IEP (calculated)

7.287

GRAVY (calculated)

0.244

Length

386 amino acids

Sequence
(BLAST)

001: MERETIDVSL ENSISYLSDD CLLSIFNKLE SESERSAFGL TCKNWFKIRN LGRKSLTFHC SFNPTIDKEH AKCIPKILAH SPCLNRISLA GLTELPDSAL
101: STLRMSGLSL KSLSFYCCSG ITDDGLAQVA IGCPNLVVVE LQSCFNITDV GLESLSKGCR ALKSVNIGSC MGISDQGVSA IFSNCSNVCT LIITGCRRLS
201: GVGFRDCSSS FCYLEAESCM LSPYGLLDVV SGSGLKYLNL HKLGSSTGLD GLGNLAFAKS LCFLNLRMCR YLTDDSVVAI ASGCPLLEEW NLAVCHGVHL
301: PGWSAIGLYC NKLRVLHVNR CRHICDQSLL ALGNGCPRLE VLHINGCAKI TNNGLALFTI SRPHVNLRVD EVLSIGPSIE NLFQMH

Best Arabidopsis Sequence Match ( AT3G07550.2 )
(BLAST)

001: MEDVSESDNN VETSIIHLPD DCLSFIFQRL DSVADHDSFG LTCHRWLNIQ NISRRSLQFQ CSFSVLNPSS LSQTNPDVSS HHLHRLLTRF QWLEHLSLSG
101: CTVLNDSSLD SLRYPGARLH TLYLDCCFGI SDDGISTIAS FCPNLSVVSL YRCNISDIGL ETLARASLSL KCVNLSYCPL VSDFGIKALS QACLQLESVK
201: ISNCKSITGV GFSGCSPTLG YVDADSCQLE PKGITGIISG GGIEFLNISG VSCYIRKDGL VPIGSGIASK LRILNLRMCR TVGDESIEAI AKGCPLLQEW
301: NLALCHEVKI SGWEAVGKWC RNLKKLHVNR CRNLCDQGLL ALRCGCMNLQ ILYMNGNARL TPTAIEMFRL HRADITLRTE EMMVIGPDWR LYAQE

Arabidopsis Description

FBL12F-box/LRR-repeat protein 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRR1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.